RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 MCCD1P59942 119 aaPredicted RBP12.46□□□□□ -0.42
RETREG3-201ENST00000309428 ADHFE1Q8IWW8 467 aa12.46□□□□□ -0.42
RETREG3-201ENST00000309428 PHACTR4Q8IZ21 702 aa12.46□□□□□ -0.42
RETREG3-201ENST00000309428 OR56A4Q8NGH8 313 aa12.46□□□□□ -0.42
RETREG3-201ENST00000309428 TFAP2CQ92754 450 aa12.46□□□□□ -0.42
RETREG3-201ENST00000309428 BOCQ9BWV1 1114 aa12.46□□□□□ -0.42
RETREG3-201ENST00000309428 PRKD2Q9BZL6 878 aa12.46□□□□□ -0.42
RETREG3-201ENST00000309428 MAGEE1Q9HCI5 957 aa12.46□□□□□ -0.42
RETREG3-201ENST00000309428 POLG2Q9UHN1 485 aa12.46□□□□□ -0.42
RETREG3-201ENST00000309428 WDR87Q6ZQQ6 2873 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 S1PR4O95977 384 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 GPIP06744 558 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 ACRP10323 421 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 MXD1Q05195 221 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 KCNAB2Q13303 367 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 DAG1Q14118 895 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 MED22Q15528 200 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 CACHD1Q5VU97 1274 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 LYSMD3Q7Z3D4 306 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 RETREG3Q86VR2 466 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 FBXO22Q8NEZ5 403 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 IL12RB2Q99665 862 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 KCNS3Q9BQ31 491 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 WDR12Q9GZL7 423 aaKnown RBP12.45□□□□□ -0.42
RETREG3-201ENST00000309428 IGSF5Q9NSI5 407 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.45□□□□□ -0.42
RETREG3-201ENST00000309428 NPHS1O60500 1241 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 ECI2O75521 394 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 UGT2B4P06133 528 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 FAM214AQ32MH5 1076 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 TECRLQ5HYJ1 363 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 RAB41Q5JT25 222 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 STXBP5Q5T5C0 1151 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 KIAA0930Q6ICG6 404 aaPredicted RBP12.45□□□□□ -0.42
RETREG3-201ENST00000309428 GPR153Q6NV75 609 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 NIPAL1Q6NVV3 410 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 ZCCHC8Q6NZY4 707 aaKnown RBP12.45□□□□□ -0.42
RETREG3-201ENST00000309428 FAM171BQ6P995 826 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 GPRIN3Q6ZVF9 776 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 ISCA2Q86U28 154 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 C2CD4AQ8NCU7 369 aaPredicted RBP12.45□□□□□ -0.42
RETREG3-201ENST00000309428 ATG10Q9H0Y0 220 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 MTG2Q9H4K7 406 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 ASB1Q9Y576 335 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 PCDHGA4Q9Y5G9 962 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 DNAJC15Q9Y5T4 150 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 CCRL2O00421 344 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 CDK14O94921 469 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 CAPN1P07384 714 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 VARSP26640 1264 aaKnown RBP12.45□□□□□ -0.42
RETREG3-201ENST00000309428 SCNN1AP37088 669 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 ARSFP54793 590 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 SCAPQ12770 1279 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 HERC3Q15034 1050 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 FAM174BQ3ZCQ3 159 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 OTOP2Q7RTS6 562 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 ZFP90Q8TF47 636 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 OR52E6Q96RD3 313 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 TTPALQ9BTX7 342 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 TRIM62Q9BVG3 475 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 RNF208Q9H0X6 261 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 GPBP1L1Q9HC44 474 aaPredicted RBP12.45□□□□□ -0.42
RETREG3-201ENST00000309428 ZC4H2Q9NQZ6 224 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 CCM2LQ9NUG4 571 aaPredicted RBP12.45□□□□□ -0.42
RETREG3-201ENST00000309428 TLR6Q9Y2C9 796 aa12.45□□□□□ -0.42
RETREG3-201ENST00000309428 ACOT8O14734 319 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 CYBAP13498 195 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 S100A1P23297 94 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 STK19P49842 368 aaPredicted RBP12.44□□□□□ -0.42
RETREG3-201ENST00000309428 HTR6P50406 440 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 TRAP1Q12931 704 aaKnown RBP12.44□□□□□ -0.42
RETREG3-201ENST00000309428 HECTD3Q5T447 861 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 C1QTNF1Q9BXJ1 281 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 ANKRD60Q9BZ19 345 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 CIPCQ9C0C6 399 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 CLPBQ9H078 707 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 NSUN3Q9H649 340 aaKnown RBP12.44□□□□□ -0.42
RETREG3-201ENST00000309428 ABCB9Q9NP78 766 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 GNPTGQ9UJJ9 305 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 TMEM88BA6NKF7 163 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 AQP12BA6NM10 295 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 CENPXA8MT69 81 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 BMP10O95393 424 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 CD36P16671 472 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 ITPKAP23677 461 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 IGFBP5P24593 272 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 SREBF2Q12772 1141 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 TP53BP2Q13625 1128 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 NPTX1Q15818 432 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 UNC50Q53HI1 259 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 NHSL2Q5HYW2 709 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 ZNF648Q5T619 568 aaPredicted RBP12.44□□□□□ -0.42
RETREG3-201ENST00000309428 ANKRD26P1Q6NSI1 321 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 DSG4Q86SJ6 1040 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 AQP12AQ8IXF9 295 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 PIK3C3Q8NEB9 887 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 TBC1D15Q8TC07 691 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 IMP4Q96G21 291 aaKnown RBP12.44□□□□□ -0.42
RETREG3-201ENST00000309428 FEM1CQ96JP0 617 aa12.44□□□□□ -0.42
RETREG3-201ENST00000309428 TBCCD1Q9NVR7 557 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms