RNA–Protein interactions for RNA: ENST00000307179.8

USP8-201, Transcript of ubiquitin specific peptidase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP8, Length 4,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-201ENST00000307179 ZC3HAV1LQ96H79 300 aaKnown RBP5.29□□□□□ -1.56
USP8-201ENST00000307179 ATOH8Q96SQ7 321 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 GAD1Q99259 594 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 C6orf62Q9GZU0 229 aaPredicted RBP5.29□□□□□ -1.56
USP8-201ENST00000307179 ALG9Q9H6U8 611 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 FBRSL1Q9HCM7 1045 aaKnown RBP5.29□□□□□ -1.56
USP8-201ENST00000307179 OSER1Q9NX31 292 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 NYNRINQ9P2P1 1898 aaKnown RBP5.29□□□□□ -1.56
USP8-201ENST00000307179 M0QYT0 321 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 MPZL2O60487 215 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 USP12O75317 370 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 ERN1O75460 977 aaKnown RBP5.29□□□□□ -1.56
USP8-201ENST00000307179 WDR47O94967 919 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 C1QBP02746 253 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 HOXD8P13378 290 aaPredicted RBP5.29□□□□□ -1.56
USP8-201ENST00000307179 LCP1P13796 627 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 ACPPP15309 386 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 SPNP16150 400 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 CLK3P49761 638 aaKnown RBP5.29□□□□□ -1.56
USP8-201ENST00000307179 CSTF3Q12996 717 aaKnown RBP5.29□□□□□ -1.56
USP8-201ENST00000307179 CTBP1Q13363 440 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 SLC10A6Q3KNW5 377 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 SV2CQ496J9 727 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 PYCR3Q53H96 274 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 INO80DQ53TQ3 878 aaPredicted RBP5.29□□□□□ -1.56
USP8-201ENST00000307179 CEP78Q5JTW2 689 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 LRRC66Q68CR7 880 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 MRNIPQ6NTE8 343 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 RANBP10Q6VN20 620 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 SAPCD2Q86UD0 394 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 GRAMD2AQ8IUY3 354 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 NIM1KQ8IY84 436 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 VWA5B2Q8N398 1253 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 FBXO39Q8N4B4 442 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 STX19Q8N4C7 294 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 CPA6Q8N4T0 437 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 TOP6BLQ8N6T0 577 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 C18orf25Q96B23 403 aaPredicted RBP5.29□□□□□ -1.56
USP8-201ENST00000307179 PYURFQ96I23 114 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 SLC25A51Q9H1U9 297 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 LIN7BQ9HAP6 207 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 POLE4Q9NR33 117 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 SEC14L4Q9UDX3 406 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 ADGRE2Q9UHX3 823 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 PCDHB14Q9Y5E9 798 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 NEMP2A6NFY4 417 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 FAM170BA6NMN3 283 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 WNT9AO14904 365 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 FADS2O95864 444 aaKnown RBP5.29□□□□□ -1.56
USP8-201ENST00000307179 GSTM1P09488 218 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 SERPINH1P50454 418 aaKnown RBP5.29□□□□□ -1.56
USP8-201ENST00000307179 EIF2B5Q13144 721 aaKnown RBP5.29□□□□□ -1.56
USP8-201ENST00000307179 RAPSNQ13702 412 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 ZNF460Q14592 562 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 AMHR2Q16671 573 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 ARMC4Q5T2S8 1044 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 ESRP1Q6NXG1 681 aaKnown RBP5.29□□□□□ -1.56
USP8-201ENST00000307179 TRAF7Q6Q0C0 670 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 C19orf48Q6RUI8 117 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 TRMT1LQ7Z2T5 733 aaKnown RBP5.29□□□□□ -1.56
USP8-201ENST00000307179 IFNEQ86WN2 208 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 CALHM3Q86XJ0 350 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 FAM20CQ8IXL6 584 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 GDPD1Q8N9F7 314 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 AGBL3Q8NEM8 1001 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 DNAJA4Q8WW22 397 aaPredicted RBP5.29□□□□□ -1.56
USP8-201ENST00000307179 PHF21BQ96EK2 531 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 ZNF583Q96ND8 569 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 EPYCQ99645 322 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 COQ7Q99807 217 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 MRPL45Q9BRJ2 306 aaKnown RBP5.29□□□□□ -1.56
USP8-201ENST00000307179 ZBED2Q9BTP6 218 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 CDADC1Q9BWV3 514 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 NXF3Q9H4D5 531 aaKnown RBP5.29□□□□□ -1.56
USP8-201ENST00000307179 RGS18Q9NS28 235 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 NUDT4Q9NZJ9 180 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 CNOT2Q9NZN8 540 aaKnown RBP5.29□□□□□ -1.56
USP8-201ENST00000307179 GMPR2Q9P2T1 348 aaKnown RBP5.29□□□□□ -1.56
USP8-201ENST00000307179 LIMD1Q9UGP4 676 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 SLCO3A1Q9UIG8 710 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 TRMT6Q9UJA5 497 aaKnown RBP5.29□□□□□ -1.56
USP8-201ENST00000307179 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.29□□□□□ -1.56
USP8-201ENST00000307179 UBQLN1Q9UMX0 589 aaKnown RBP5.29□□□□□ -1.56
USP8-201ENST00000307179 MAN2B2Q9Y2E5 1009 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 PCDHGB3Q9Y5G1 929 aa5.29□□□□□ -1.56
USP8-201ENST00000307179 TNPO3Q9Y5L0 923 aaKnown RBP5.29□□□□□ -1.56
USP8-201ENST00000307179 LCHNA4D1U4 455 aa5.28□□□□□ -1.56
USP8-201ENST00000307179 SH3D21A4FU49 640 aa5.28□□□□□ -1.56
USP8-201ENST00000307179 LINC00862A6NCI5 91 aa5.28□□□□□ -1.56
USP8-201ENST00000307179 CCDC182A6NF36 153 aa5.28□□□□□ -1.56
USP8-201ENST00000307179 SNTNA6NMZ2 147 aa5.28□□□□□ -1.56
USP8-201ENST00000307179 PTGES3LE9PB15 166 aa5.28□□□□□ -1.56
USP8-201ENST00000307179 F5H423 210 aaPredicted RBP5.28□□□□□ -1.56
USP8-201ENST00000307179 CCRL2O00421 344 aa5.28□□□□□ -1.56
USP8-201ENST00000307179 NOS1APO75052 506 aaPredicted RBP5.28□□□□□ -1.56
USP8-201ENST00000307179 ZNF780AO75290 641 aaPredicted RBP5.28□□□□□ -1.56
USP8-201ENST00000307179 CCNDBP1O95273 360 aa5.28□□□□□ -1.56
USP8-201ENST00000307179 CDK1P06493 297 aa5.28□□□□□ -1.56
USP8-201ENST00000307179 ZNF37AP17032 561 aaPredicted RBP5.28□□□□□ -1.56
USP8-201ENST00000307179 NPR3P17342 541 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms