RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 NUDT22Q9BRQ3 303 aa10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 AARSD1Q9BTE6 412 aaKnown RBP10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 HGH1Q9BTY7 390 aa10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 TRIT1Q9H3H1 467 aaKnown RBP10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 KIR3DX1Q9H7L2 352 aa10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 L2HGDHQ9H9P8 463 aa10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 RDH14Q9HBH5 336 aa10.73□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 ADAMTS20P59510 1910 aa10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 KNTC1P50748 2209 aa10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 CCDC187A0A096LP49 1063 aa10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 GPC4O75487 556 aa10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 HAUS5O94927 633 aa10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 CD1CP29017 333 aa10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 SSTR1P30872 391 aa10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 CCKBRP32239 447 aa10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 CSF2RBP32927 897 aa10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 PHBP35232 272 aa10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 CAPZBP47756 277 aa10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 ILF2Q12905 390 aaKnown RBP10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 PRKAA1Q13131 559 aa10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 TRA2AQ13595 282 aaKnown RBP eCLIP10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 C3orf38Q5JPI3 329 aa10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 TEDDM1Q5T9Z0 273 aa10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 FAM45BPQ6NSW5 357 aa10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 TMEM71Q6P5X7 295 aa10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 TTC23LQ6PF05 361 aa10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 WDR74Q6RFH5 385 aaPredicted RBP10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 XKR5Q6UX68 686 aa10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 C3orf62Q6ZUJ4 267 aa10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 USP53Q70EK8 1073 aa10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 TBC1D21Q8IYX1 336 aa10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 RAB42Q8N4Z0 105 aa10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 GPATCH11Q8N954 259 aa10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 OR4D9Q8NGE8 314 aa10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 OR5K2Q8NHB8 316 aa10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 CFAP61Q8NHU2 1237 aa10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 FAM45AQ8TCE6 357 aa10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 ATXN7L3BQ96GX2 97 aa10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 LIN37Q96GY3 246 aaPredicted RBP10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 CCDC74BQ96LY2 380 aa10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 PLAC1Q9HBJ0 212 aa10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 ZDHHC18Q9NUE0 388 aa10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 TAS2R13Q9NYV9 303 aa10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 SLC17A6Q9P2U8 582 aa10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 POLG2Q9UHN1 485 aa10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 SLC24A2Q9UI40 661 aa10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 TRMT6Q9UJA5 497 aaKnown RBP10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 TSR3Q9UJK0 312 aaKnown RBP10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 WASF3Q9UPY6 502 aa10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 TDRKHQ9Y2W6 561 aaKnown RBP10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 ENTPD2Q9Y5L3 495 aa10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 PCM1Q15154 2024 aa10.72□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 PRAMEF33A0A0G2JMD5 474 aa10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 FAM221BA6H8Z2 402 aa10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 CASC3O15234 703 aaKnown RBP10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 SLCO2B1O94956 709 aa10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 ATP5DP30049 168 aa10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 DEKP35659 375 aaKnown RBP10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 RGS4P49798 205 aa10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 PDX1P52945 283 aa10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 LIMK2P53671 638 aa10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 EIF3IQ13347 325 aaKnown RBP10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 PDAP1Q13442 181 aaKnown RBP10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 SQSTM1Q13501 440 aa10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 SNAP47Q5SQN1 464 aa10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 LRRC8EQ6NSJ5 796 aa10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 IRGCQ6NXR0 463 aa10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 FOXR1Q6PIV2 292 aa10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 UNC5DQ6UXZ4 953 aa10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 STRA8Q7Z7C7 330 aa10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 B3GNT8Q7Z7M8 397 aa10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 MARCH9Q86YJ5 346 aa10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 VRK3Q8IV63 474 aa10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 DCUN1D3Q8IWE4 304 aa10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 CTAGE3PQ8IX95 158 aa10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 SIDT2Q8NBJ9 832 aaKnown RBP10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 PHC3Q8NDX5 983 aa10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 OR52E1Q8NGJ3 308 aa10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 OR5AR1Q8NGP9 310 aa10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 MAGEC3Q8TD91 643 aa10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 LCN9Q8WX39 176 aa10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 JPH3Q8WXH2 748 aaPredicted RBP10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 RSC1A1Q92681 617 aa10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 ZDHHC12Q96GR4 267 aa10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 NDNQ99608 321 aa10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 GPR21Q99679 349 aa10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 CMKLR1Q99788 373 aa10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 NRSN2Q9GZP1 204 aa10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 SRMSQ9H3Y6 488 aa10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 MOCS1Q9NZB8 636 aa10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 KLHL42Q9P2K6 505 aa10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 KLHL3Q9UH77 587 aa10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 AK5Q9Y6K8 562 aa10.71□□□□□ -0.69
CSPG4P1Y-201ENST00000306641 SNRNP200O75643 2136 aaKnown RBP10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 MN1Q10571 1320 aaPredicted RBP10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 IGHV5-10-1A0A0J9YXX1 117 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 TCRBV9S1A1TA0A576 114 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 GSAPA4D1B5 854 aa10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 PABPN1LA6NDY0 278 aaKnown RBP10.7□□□□□ -0.7
CSPG4P1Y-201ENST00000306641 BHMG1C9JSJ3 638 aaPredicted RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms