RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 PRKD3O94806 890 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 INMTO95050 263 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 GADD45GO95257 159 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 FGF19O95750 216 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 UGT2B4P06133 528 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 VAMP1P23763 118 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 SPAM1P38567 509 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 TMEM44Q2T9K0 475 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 PLEKHG4Q58EX7 1191 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 ATAT1Q5SQI0 421 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 C3orf33Q6P1S2 294 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 GET4Q7L5D6 327 aaPredicted RBP10.24□□□□□ -0.77
CLIP1-201ENST00000302528 PHB2Q99623 299 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 HTATIP2Q9BUP3 242 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 STRA6Q9BX79 667 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 RHOJQ9H4E5 214 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 ACSS3Q9H6R3 686 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 IPPKQ9H8X2 491 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 NMUR1Q9HB89 426 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 GDAP2Q9NXN4 497 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 FARSAQ9Y285 508 aaKnown RBP10.24□□□□□ -0.77
CLIP1-201ENST00000302528 H3BNX3 289 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 PIAS1O75925 651 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 ASLP04424 464 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 EPHX1P07099 455 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 ALPPL2P10696 532 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 TAL1P17542 331 aaPredicted RBP10.24□□□□□ -0.77
CLIP1-201ENST00000302528 OR12D2P58182 307 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 MAD2L1BPQ15013 274 aaPredicted RBP10.24□□□□□ -0.77
CLIP1-201ENST00000302528 BRMS1LQ5PSV4 323 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 OGFOD2Q6N063 350 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 ZNF611Q8N823 705 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 GPR152Q8TDT2 470 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 SLC35G5Q96KT7 338 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 KAT8Q9H7Z6 458 aaKnown RBP10.24□□□□□ -0.77
CLIP1-201ENST00000302528 DNAAF2Q9NVR5 837 aaKnown RBP10.24□□□□□ -0.77
CLIP1-201ENST00000302528 RAB26Q9ULW5 256 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 TIMM22Q9Y584 194 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 SQORQ9Y6N5 450 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 C13orf42A0A1B0GVH6 325 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 FAM149AA5PLN7 773 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 B3GALT2O43825 422 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 TGDSO95455 350 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 MT-ND1P03886 318 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 VEGFAP15692 232 aaPredicted RBP10.24□□□□□ -0.77
CLIP1-201ENST00000302528 CD40LGP29965 261 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 SLC1A2P43004 574 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 KHKP50053 298 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 CCR3P51677 355 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 GPR158Q5T848 1215 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 TUBA3EQ6PEY2 450 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 USP43Q70EL4 1123 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 CFAP206Q8IYR0 622 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 CFAP52Q8N1V2 620 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 SLC44A3Q8N4M1 653 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 CYTH4Q9UIA0 394 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 PCDHGB2Q9Y5G2 931 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 PPM1BO75688 479 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 IPO13O94829 963 aaKnown RBP10.24□□□□□ -0.77
CLIP1-201ENST00000302528 SCELO95171 688 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 TOB1P50616 345 aaPredicted RBP10.24□□□□□ -0.77
CLIP1-201ENST00000302528 KLF10Q13118 480 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 WSCD2Q2TBF2 565 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 CXCL17Q6UXB2 119 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 NIPA1Q7RTP0 329 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 GALNT15Q8N3T1 639 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 OR4K2Q8NGD2 314 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 GPR151Q8TDV0 419 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 ABHD5Q8WTS1 349 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 NINJ1Q92982 152 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 FCRL2Q96LA5 508 aaPredicted RBP10.24□□□□□ -0.77
CLIP1-201ENST00000302528 SLC5A7Q9GZV3 580 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 TMEM134Q9H6X4 195 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 RCOR3Q9P2K3 495 aaPredicted RBP10.24□□□□□ -0.77
CLIP1-201ENST00000302528 HPSEQ9Y251 543 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 HES2Q9Y543 173 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 OTOL1A6NHN0 477 aaPredicted RBP10.24□□□□□ -0.77
CLIP1-201ENST00000302528 MSCO60682 206 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 PGLSO95336 258 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 CALCAP01258 141 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 TPTEP56180 551 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 OR2B6P58173 313 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 HEPACAMQ14CZ8 416 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 IFI44LQ53G44 452 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 ASB18Q6ZVZ8 466 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 OTOP1Q7RTM1 612 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 KIAA0319LQ8IZA0 1049 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 LIX1Q8N485 282 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 KCT2Q8NC54 265 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 IRF2BPLQ9H1B7 796 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 CARD8Q9Y2G2 431 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 C9IYK1 514 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 MATN2O00339 956 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 TBX1O43435 398 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 CYP1A2P05177 515 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 CPN2P22792 545 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 PAX3P23760 479 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 GLP1RP43220 463 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 GJA9P57773 515 aa10.23□□□□□ -0.77
CLIP1-201ENST00000302528 TARDBPQ13148 414 aaKnown RBP eCLIP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms