RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 ANGPTL1O95841 491 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 YBEYP58557 167 aaPredicted RBP13.82□□□□□ -0.2
SDC2-201ENST00000302190 ERVK-8P63133 956 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 KRT33BQ14525 404 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 PM20D1Q6GTS8 502 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 PCSK9Q8NBP7 692 aaKnown RBP13.82□□□□□ -0.2
SDC2-201ENST00000302190 OR13J1Q8NGT2 312 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 TSGA13Q96PP4 275 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 TPK1Q9H3S4 243 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 REEP1Q9H902 201 aa13.82□□□□□ -0.2
SDC2-201ENST00000302190 AQP12BA6NM10 295 aa13.81□□□□□ -0.2
SDC2-201ENST00000302190 FFAR2O15552 330 aa13.81□□□□□ -0.2
SDC2-201ENST00000302190 KERAO60938 352 aa13.81□□□□□ -0.2
SDC2-201ENST00000302190 S100A1P23297 94 aa13.81□□□□□ -0.2
SDC2-201ENST00000302190 ARNTP27540 789 aa13.81□□□□□ -0.2
SDC2-201ENST00000302190 ARCN1P48444 511 aaKnown RBP13.81□□□□□ -0.2
SDC2-201ENST00000302190 ST13P50502 369 aaKnown RBP13.81□□□□□ -0.2
SDC2-201ENST00000302190 PMS2P3Q13401 168 aa13.81□□□□□ -0.2
SDC2-201ENST00000302190 RAB39AQ14964 217 aa13.81□□□□□ -0.2
SDC2-201ENST00000302190 TGFBIQ15582 683 aa13.81□□□□□ -0.2
SDC2-201ENST00000302190 GTDC1Q4AE62 458 aa13.81□□□□□ -0.2
SDC2-201ENST00000302190 SPATA19Q7Z5L4 167 aa13.81□□□□□ -0.2
SDC2-201ENST00000302190 AQP12AQ8IXF9 295 aa13.81□□□□□ -0.2
SDC2-201ENST00000302190 PIANPQ8IYJ0 282 aa13.81□□□□□ -0.2
SDC2-201ENST00000302190 SCAIQ8N9R8 606 aa13.81□□□□□ -0.2
SDC2-201ENST00000302190 MEAF6Q9HAF1 191 aa13.81□□□□□ -0.2
SDC2-201ENST00000302190 SQORQ9Y6N5 450 aa13.81□□□□□ -0.2
SDC2-201ENST00000302190 SLC22A2O15244 555 aa13.81□□□□□ -0.2
SDC2-201ENST00000302190 UGT2B4P06133 528 aa13.81□□□□□ -0.2
SDC2-201ENST00000302190 POLD2P49005 469 aa13.81□□□□□ -0.2
SDC2-201ENST00000302190 RPIAP49247 311 aa13.81□□□□□ -0.2
SDC2-201ENST00000302190 LRP8Q14114 963 aa13.81□□□□□ -0.2
SDC2-201ENST00000302190 CCNYL2Q5T2Q4 361 aa13.81□□□□□ -0.2
SDC2-201ENST00000302190 DENND5AQ6IQ26 1287 aa13.81□□□□□ -0.2
SDC2-201ENST00000302190 C1QTNF1Q9BXJ1 281 aa13.81□□□□□ -0.2
SDC2-201ENST00000302190 MIR1-1HGQ9H1L0 117 aa13.81□□□□□ -0.2
SDC2-201ENST00000302190 PDP1Q9P0J1 537 aaPredicted RBP13.81□□□□□ -0.2
SDC2-201ENST00000302190 PDE10AQ9Y233 779 aa13.81□□□□□ -0.2
SDC2-201ENST00000302190 KPNA5O15131 536 aa13.81□□□□□ -0.2
SDC2-201ENST00000302190 STK16O75716 305 aa13.81□□□□□ -0.2
SDC2-201ENST00000302190 OXSR1O95747 527 aaPredicted RBP13.81□□□□□ -0.2
SDC2-201ENST00000302190 APOA1P02647 267 aa13.81□□□□□ -0.2
SDC2-201ENST00000302190 CHI3L1P36222 383 aaPredicted RBP13.81□□□□□ -0.2
SDC2-201ENST00000302190 CDK9P50750 372 aaKnown RBP13.81□□□□□ -0.2
SDC2-201ENST00000302190 UAP1L1Q3KQV9 507 aa13.81□□□□□ -0.2
SDC2-201ENST00000302190 ZBED5Q49AG3 693 aa13.81□□□□□ -0.2
SDC2-201ENST00000302190 GPR153Q6NV75 609 aa13.81□□□□□ -0.2
SDC2-201ENST00000302190 DOK6Q6PKX4 331 aa13.81□□□□□ -0.2
SDC2-201ENST00000302190 R3HCC1LQ7Z5L2 792 aaKnown RBP13.81□□□□□ -0.2
SDC2-201ENST00000302190 ARL14EPQ8N8R7 260 aaPredicted RBP13.81□□□□□ -0.2
SDC2-201ENST00000302190 MRPS31Q92665 395 aaKnown RBP13.81□□□□□ -0.2
SDC2-201ENST00000302190 HPS1Q92902 700 aa13.81□□□□□ -0.2
SDC2-201ENST00000302190 NODALQ96S42 347 aa13.81□□□□□ -0.2
SDC2-201ENST00000302190 GPATCH1Q9BRR8 931 aaKnown RBP13.81□□□□□ -0.2
SDC2-201ENST00000302190 TFB2MQ9H5Q4 396 aaKnown RBP13.81□□□□□ -0.2
SDC2-201ENST00000302190 ZDHHC7Q9NXF8 308 aa13.81□□□□□ -0.2
SDC2-201ENST00000302190 PRSS51A0A1B0GVH4 220 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 ANKRD26P1Q6NSI1 321 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 SNX29P2Q8IUI4 249 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 HID1Q8IV36 788 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 SLC7A5P1Q8MH63 180 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 SH3RF2Q8TEC5 729 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 BORCS5Q969J3 196 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 GPR62Q9BZJ7 368 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 TOR3AQ9H497 397 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 OSER1Q9NX31 292 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 RAPGEFL1Q9UHV5 662 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 OGDHLQ9ULD0 1010 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 SH3PXD2BA1X283 911 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 K7ERQ8 282 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 CXCR6O00574 342 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 EPN2O95208 641 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 OPN1SWP03999 348 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 SBK3P0C264 359 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 IGFBP5P24593 272 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 XKR6Q5GH73 641 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 UBE2R2Q712K3 238 aaPredicted RBP13.8□□□□□ -0.2
SDC2-201ENST00000302190 KLHDC9Q8NEP7 349 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 MCOLN3Q8TDD5 553 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 NSMCE3Q96MG7 304 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 RNF208Q9H0X6 261 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 HMG20AQ9NP66 347 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 CCM2LQ9NUG4 571 aaPredicted RBP13.8□□□□□ -0.2
SDC2-201ENST00000302190 RNF11Q9Y3C5 154 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 ANKRD66B4E2M5 251 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 H0Y858 1186 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 BCKDKO14874 412 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 CLDN7O95471 211 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 KRT75O95678 551 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 GBAP04062 536 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 DNAJB13P59910 316 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 FUT10Q6P4F1 479 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 TXNDC11Q6PKC3 985 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 POC5Q8NA72 575 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 ZHX1-C8orf76Q96EF9 292 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 SCLYQ96I15 445 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 SUSD3Q96L08 255 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 FOPNLQ96NB1 174 aa13.8□□□□□ -0.2
SDC2-201ENST00000302190 TSEN34Q9BSV6 310 aaKnown RBP13.8□□□□□ -0.2
SDC2-201ENST00000302190 ITM2CQ9NQX7 267 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms