RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 COL1A2P08123 1366 aa13.37□□□□□ -0.27
CHRFAM7A-201ENST00000299847 KELP23276 732 aa13.37□□□□□ -0.27
CHRFAM7A-201ENST00000299847 FAUP35544 74 aaKnown RBP13.37□□□□□ -0.27
CHRFAM7A-201ENST00000299847 PBX1P40424 430 aa13.37□□□□□ -0.27
CHRFAM7A-201ENST00000299847 USP30Q70CQ3 517 aa13.37□□□□□ -0.27
CHRFAM7A-201ENST00000299847 PGAM4Q8N0Y7 254 aa13.37□□□□□ -0.27
CHRFAM7A-201ENST00000299847 BORCS5Q969J3 196 aa13.37□□□□□ -0.27
CHRFAM7A-201ENST00000299847 TIFAQ96CG3 184 aa13.37□□□□□ -0.27
CHRFAM7A-201ENST00000299847 SLC38A3Q99624 504 aa13.37□□□□□ -0.27
CHRFAM7A-201ENST00000299847 DENND2DQ9H6A0 471 aaPredicted RBP13.37□□□□□ -0.27
CHRFAM7A-201ENST00000299847 GPN1Q9HCN4 374 aaPredicted RBP13.37□□□□□ -0.27
CHRFAM7A-201ENST00000299847 SNTG1Q9NSN8 517 aa13.37□□□□□ -0.27
CHRFAM7A-201ENST00000299847 ZNF224Q9NZL3 707 aa13.37□□□□□ -0.27
CHRFAM7A-201ENST00000299847 STXBP5LQ9Y2K9 1186 aa13.37□□□□□ -0.27
CHRFAM7A-201ENST00000299847 NR2E1Q9Y466 385 aa13.37□□□□□ -0.27
CHRFAM7A-201ENST00000299847 PCDHGB3Q9Y5G1 929 aa13.37□□□□□ -0.27
CHRFAM7A-201ENST00000299847 SLC35F4A4IF30 521 aa13.37□□□□□ -0.27
CHRFAM7A-201ENST00000299847 MTTPP55157 894 aa13.37□□□□□ -0.27
CHRFAM7A-201ENST00000299847 RAB25P57735 213 aa13.37□□□□□ -0.27
CHRFAM7A-201ENST00000299847 TARDBPQ13148 414 aaKnown RBP eCLIP13.37□□□□□ -0.27
CHRFAM7A-201ENST00000299847 OLIG2Q13516 323 aa13.37□□□□□ -0.27
CHRFAM7A-201ENST00000299847 SP140LQ9H930 580 aa13.37□□□□□ -0.27
CHRFAM7A-201ENST00000299847 TRPV5Q9NQA5 729 aa13.37□□□□□ -0.27
CHRFAM7A-201ENST00000299847 CORO1CQ9ULV4 474 aaPredicted RBP13.37□□□□□ -0.27
CHRFAM7A-201ENST00000299847 GRIP1Q9Y3R0 1128 aa13.37□□□□□ -0.27
CHRFAM7A-201ENST00000299847 PER2O15055 1255 aa13.37□□□□□ -0.27
CHRFAM7A-201ENST00000299847 GADD45GO95257 159 aa13.37□□□□□ -0.27
CHRFAM7A-201ENST00000299847 ITGB1P05556 798 aa13.37□□□□□ -0.27
CHRFAM7A-201ENST00000299847 ELP6Q0PNE2 266 aa13.37□□□□□ -0.27
CHRFAM7A-201ENST00000299847 CYP27C1Q4G0S4 372 aa13.37□□□□□ -0.27
CHRFAM7A-201ENST00000299847 KHDC1Q4VXA5 237 aaKnown RBP13.37□□□□□ -0.27
CHRFAM7A-201ENST00000299847 BEND7Q8N7W2 519 aaPredicted RBP13.37□□□□□ -0.27
CHRFAM7A-201ENST00000299847 HERVK_113Q902F9 699 aa13.37□□□□□ -0.27
CHRFAM7A-201ENST00000299847 DNAAF2Q9NVR5 837 aaKnown RBP13.37□□□□□ -0.27
CHRFAM7A-201ENST00000299847 PRAMEF33A0A0G2JMD5 474 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 TRAFD1O14545 582 aaPredicted RBP13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 ITM2AO43736 263 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 PRAMEF10O60809 474 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 UGT1A6P19224 532 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 UGT1A1P22309 533 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 UGT1A4P22310 534 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 UGT1A3P35503 534 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 CREB5Q02930 508 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 LCP2Q13094 533 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 CHAF1BQ13112 559 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 PUM1Q14671 1186 aaKnown RBP eCLIP13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 ZDHHC20Q5W0Z9 365 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 ZDHHC21Q8IVQ6 265 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 OR6K6Q8NGW6 343 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 ZNF180Q9UJW8 692 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 SYNPO2Q9UMS6 1093 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 YJEFN3A6XGL0 299 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 AIREO43918 545 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 NFATC1O95644 943 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 CYP3A5P20815 502 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 RNF144AP50876 292 aaPredicted RBP13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 PTGES3Q15185 160 aaKnown RBP13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 ARSIQ5FYB1 569 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 SLC22A15Q8IZD6 547 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 OR5M3Q8NGP4 307 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 ROBO3Q96MS0 1386 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 A8MU76 341 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 WFS1O76024 890 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 PGLSO95336 258 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 TGFB1P01137 390 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 ASPAP45381 313 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 ASMTP46597 345 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 KIAA1161Q6NSJ0 714 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 ZNF662Q6ZS27 426 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 OR10Q1Q8NGQ4 319 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 GPR151Q8TDV0 419 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 NAT14Q8WUY8 206 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 COQ8BQ96D53 544 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 SLC35G5Q96KT7 338 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 ZFP3Q96NJ6 502 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 MRPS30Q9NP92 439 aaKnown RBP13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 PLAGL1Q9UM63 463 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 NEMP2A6NFY4 417 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 KHNYNO15037 678 aaKnown RBP13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 ACADLP28330 430 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 LCN1P1Q5VSP4 162 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 ZNF627Q7L945 461 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 COX18Q8N8Q8 333 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 DGCR14Q96DF8 476 aaKnown RBP13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 RBM18Q96H35 190 aaKnown RBP13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 GAS2L1Q99501 681 aaPredicted RBP13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 MED28Q9H204 178 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 ARHGAP23Q9P227 1491 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 B4DGG1 531 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 SLC30A4O14863 429 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 DHFRP00374 187 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 PRNPP04156 253 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 SLC35G6P0C7Q6 338 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 ARCN1P48444 511 aaKnown RBP13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 LILRA4P59901 499 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 ACTR3P61158 418 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 NFATC2Q13469 925 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 LAPTM5Q13571 262 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 E2F2Q14209 437 aa13.36□□□□□ -0.27
CHRFAM7A-201ENST00000299847 VSTM1Q6UX27 236 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms