RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 CPTPQ5TA50 214 aa11.02□□□□□ -0.64
HDGFL3-201ENST00000299633 RAP1GAP2Q684P5 730 aa11.02□□□□□ -0.64
HDGFL3-201ENST00000299633 SLC30A6Q6NXT4 461 aa11.02□□□□□ -0.64
HDGFL3-201ENST00000299633 FAM198BQ6UWH4 519 aa11.02□□□□□ -0.64
HDGFL3-201ENST00000299633 SERPINA13PQ6UXR4 307 aa11.02□□□□□ -0.64
HDGFL3-201ENST00000299633 ASB18Q6ZVZ8 466 aa11.02□□□□□ -0.64
HDGFL3-201ENST00000299633 SMARCD2Q92925 531 aa11.02□□□□□ -0.64
HDGFL3-201ENST00000299633 IL1RAPQ9NPH3 570 aa11.02□□□□□ -0.64
HDGFL3-201ENST00000299633 GPRC5CQ9NQ84 441 aa11.02□□□□□ -0.64
HDGFL3-201ENST00000299633 FAM208AQ9UK61 1670 aaKnown RBP11.02□□□□□ -0.64
HDGFL3-201ENST00000299633 GPR89AB7ZAQ6 455 aa11.02□□□□□ -0.64
HDGFL3-201ENST00000299633 MAGEC1O60732 1142 aa11.02□□□□□ -0.64
HDGFL3-201ENST00000299633 SCAF4O95104 1147 aaKnown RBP11.02□□□□□ -0.64
HDGFL3-201ENST00000299633 GPR89BP0CG08 455 aa11.02□□□□□ -0.64
HDGFL3-201ENST00000299633 MAP3K8P41279 467 aa11.02□□□□□ -0.64
HDGFL3-201ENST00000299633 GSCP56915 257 aaPredicted RBP11.02□□□□□ -0.64
HDGFL3-201ENST00000299633 SETMARQ53H47 684 aaPredicted RBP11.02□□□□□ -0.64
HDGFL3-201ENST00000299633 TMEM39BQ9GZU3 492 aa11.02□□□□□ -0.64
HDGFL3-201ENST00000299633 QPCTLQ9NXS2 382 aa11.02□□□□□ -0.64
HDGFL3-201ENST00000299633 ZNF99A8MXY4 864 aaPredicted RBP11.02□□□□□ -0.64
HDGFL3-201ENST00000299633 ITPKAP23677 461 aa11.02□□□□□ -0.64
HDGFL3-201ENST00000299633 AUHQ13825 339 aaKnown RBP11.02□□□□□ -0.64
HDGFL3-201ENST00000299633 TKFCQ3LXA3 575 aa11.02□□□□□ -0.64
HDGFL3-201ENST00000299633 USP45Q70EL2 814 aa11.02□□□□□ -0.64
HDGFL3-201ENST00000299633 DAGLBQ8NCG7 672 aa11.02□□□□□ -0.64
HDGFL3-201ENST00000299633 TWNKQ96RR1 684 aa11.02□□□□□ -0.64
HDGFL3-201ENST00000299633 MXRA8Q9BRK3 442 aa11.02□□□□□ -0.64
HDGFL3-201ENST00000299633 TRPS1Q9UHF7 1281 aa11.02□□□□□ -0.64
HDGFL3-201ENST00000299633 CLUHO75153 1309 aa11.02□□□□□ -0.64
HDGFL3-201ENST00000299633 HCKP08631 526 aa11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 LTA4HP09960 611 aaKnown RBP11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 UROSP10746 265 aa11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 NOMO2Q5JPE7 1267 aa11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 SLC41A1Q8IVJ1 513 aa11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 LAMA4Q16363 1823 aa11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 GSC2O15499 205 aa11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 OAZ2O95190 189 aa11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 PAK4O96013 591 aaPredicted RBP11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 VEGFCP49767 419 aa11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 HOPXQ9BPY8 73 aaPredicted RBP11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 SEMA4BQ9NPR2 832 aaPredicted RBP11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 RFXANKO14593 260 aa11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 PSEN1P49768 467 aa11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 SEZ6Q53EL9 994 aa11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 ECHDC2Q86YB7 292 aa11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 PDZD9Q8IXQ8 264 aa11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 TRAPPC12Q8WVT3 735 aa11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 LPAR1Q92633 364 aa11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 ZNF597Q96LX8 424 aa11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 MGAT1P26572 445 aa11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 HERV-K104P61576 105 aa11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 GCNT6Q5T4J0 391 aa11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 KANSL1Q7Z3B3 1105 aa11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 TARS2Q9BW92 718 aaKnown RBP11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 PGLSO95336 258 aa11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 ARL11Q969Q4 196 aa11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 CNOT6Q9ULM6 557 aaKnown RBP11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 MEN1O00255 615 aa11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 ST3GAL4Q11206 333 aa11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 PGM2Q96G03 612 aa11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 TMEM121BQ9BXQ6 578 aaPredicted RBP11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 UFSP2Q9NUQ7 469 aa11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 E7ESA3 106 aa11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 TNFRSF11BO00300 401 aa11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 ADRA2BP18089 450 aa11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 FIP1L1Q6UN15 594 aaKnown RBP11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 DCP1BQ8IZD4 617 aaKnown RBP11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 OR5T1Q8NG75 326 aa11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 SLC5A5Q92911 643 aa11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 BORCS8Q96FH0 119 aa11.02□□□□□ -0.65
HDGFL3-201ENST00000299633 TMEM131LA2VDJ0 1609 aa11.01□□□□□ -0.65
HDGFL3-201ENST00000299633 RGPD2P0DJD1 1756 aa11.01□□□□□ -0.65
HDGFL3-201ENST00000299633 CTBP2P56545 445 aa11.01□□□□□ -0.65
HDGFL3-201ENST00000299633 FBXO43Q4G163 708 aa11.01□□□□□ -0.65
HDGFL3-201ENST00000299633 EFCAB12Q6NXP0 572 aa11.01□□□□□ -0.65
HDGFL3-201ENST00000299633 XPNPEP3Q9NQH7 507 aa11.01□□□□□ -0.65
HDGFL3-201ENST00000299633 PCDH8O95206 1070 aa11.01□□□□□ -0.65
HDGFL3-201ENST00000299633 RRAS2P62070 204 aaPredicted RBP11.01□□□□□ -0.65
HDGFL3-201ENST00000299633 C9orf43Q8TAL5 461 aaPredicted RBP11.01□□□□□ -0.65
HDGFL3-201ENST00000299633 DENND2DQ9H6A0 471 aaPredicted RBP11.01□□□□□ -0.65
HDGFL3-201ENST00000299633 TLR8Q9NR97 1041 aaKnown RBP11.01□□□□□ -0.65
HDGFL3-201ENST00000299633 KCND1Q9NSA2 647 aa11.01□□□□□ -0.65
HDGFL3-201ENST00000299633 SCP2D1Q9UJQ7 156 aa11.01□□□□□ -0.65
HDGFL3-201ENST00000299633 PCTPQ9UKL6 214 aa11.01□□□□□ -0.65
HDGFL3-201ENST00000299633 HPSEQ9Y251 543 aa11.01□□□□□ -0.65
HDGFL3-201ENST00000299633 C20orf202A1L168 122 aa11.01□□□□□ -0.65
HDGFL3-201ENST00000299633 ADAMDEC1O15204 470 aa11.01□□□□□ -0.65
HDGFL3-201ENST00000299633 ZNF135P52742 658 aaPredicted RBP11.01□□□□□ -0.65
HDGFL3-201ENST00000299633 ZNF773Q6PK81 442 aa11.01□□□□□ -0.65
HDGFL3-201ENST00000299633 KIAA0895Q8NCT3 520 aa11.01□□□□□ -0.65
HDGFL3-201ENST00000299633 BSNDQ8WZ55 320 aa11.01□□□□□ -0.65
HDGFL3-201ENST00000299633 ELP3Q9H9T3 547 aa11.01□□□□□ -0.65
HDGFL3-201ENST00000299633 APOA2P02652 100 aa11.01□□□□□ -0.65
HDGFL3-201ENST00000299633 ZDHHC11BP0C7U3 371 aa11.01□□□□□ -0.65
HDGFL3-201ENST00000299633 CD36P16671 472 aa11.01□□□□□ -0.65
HDGFL3-201ENST00000299633 AMPD1P23109 780 aa11.01□□□□□ -0.65
HDGFL3-201ENST00000299633 RYKP34925 604 aa11.01□□□□□ -0.65
HDGFL3-201ENST00000299633 SGCGQ13326 291 aa11.01□□□□□ -0.65
HDGFL3-201ENST00000299633 ZFP82Q8N141 532 aa11.01□□□□□ -0.65
HDGFL3-201ENST00000299633 AP2M1Q96CW1 435 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms