RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 OGFRQ9NZT2 677 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 TRMT6Q9UJA5 497 aaKnown RBP8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 MED16Q9Y2X0 877 aa8.28□□□□□ -1.08
PTPDC1-201ENST00000288976 LIN7AO14910 233 aaPredicted RBP8.27□□□□□ -1.08
PTPDC1-201ENST00000288976 SLC16A5O15375 505 aa8.27□□□□□ -1.08
PTPDC1-201ENST00000288976 SGTAO43765 313 aa8.27□□□□□ -1.08
PTPDC1-201ENST00000288976 OR1I1O60431 355 aa8.27□□□□□ -1.08
PTPDC1-201ENST00000288976 SLC35E2BP0CK96 405 aa8.27□□□□□ -1.08
PTPDC1-201ENST00000288976 DDX5P17844 614 aaKnown RBP8.27□□□□□ -1.08
PTPDC1-201ENST00000288976 UGT1A6P19224 532 aa8.27□□□□□ -1.08
PTPDC1-201ENST00000288976 UGT1A1P22309 533 aa8.27□□□□□ -1.08
PTPDC1-201ENST00000288976 UGT1A4P22310 534 aa8.27□□□□□ -1.08
PTPDC1-201ENST00000288976 CA5AP35218 305 aa8.27□□□□□ -1.08
PTPDC1-201ENST00000288976 UGT1A3P35503 534 aa8.27□□□□□ -1.08
PTPDC1-201ENST00000288976 UGT1A5P35504 534 aa8.27□□□□□ -1.08
PTPDC1-201ENST00000288976 DHPSP49366 369 aaPredicted RBP8.27□□□□□ -1.08
PTPDC1-201ENST00000288976 SLC16A1P53985 500 aa8.27□□□□□ -1.08
PTPDC1-201ENST00000288976 PPP2R2AP63151 447 aa8.27□□□□□ -1.08
PTPDC1-201ENST00000288976 BMPR2Q13873 1038 aa8.27□□□□□ -1.08
PTPDC1-201ENST00000288976 RBM20Q5T481 1227 aaKnown RBP8.27□□□□□ -1.08
PTPDC1-201ENST00000288976 RABEPKQ7Z6M1 372 aa8.27□□□□□ -1.08
PTPDC1-201ENST00000288976 HEATR4Q86WZ0 1026 aa8.27□□□□□ -1.08
PTPDC1-201ENST00000288976 TMEM105Q8N8V8 129 aa8.27□□□□□ -1.08
PTPDC1-201ENST00000288976 OR10G6Q8NH81 332 aa8.27□□□□□ -1.08
PTPDC1-201ENST00000288976 CD200R1Q8TD46 325 aa8.27□□□□□ -1.08
PTPDC1-201ENST00000288976 DNASE2BQ8WZ79 361 aa8.27□□□□□ -1.08
PTPDC1-201ENST00000288976 FUBP1Q96AE4 644 aaKnown RBP8.27□□□□□ -1.08
PTPDC1-201ENST00000288976 CCDC124Q96CT7 223 aaKnown RBP8.27□□□□□ -1.08
PTPDC1-201ENST00000288976 ADA2Q9NZK5 511 aa8.27□□□□□ -1.08
PTPDC1-201ENST00000288976 CACNA1HO95180 2353 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 H3BQF6 201 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 TNFRSF10AO00220 468 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 PI15O43692 258 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 DYRK3O43781 588 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 NUAK1O60285 661 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 PDGFBP01127 241 aaPredicted RBP8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 ZNF37AP17032 561 aaPredicted RBP8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 DGKAP23743 735 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 HALP42357 657 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 MAGOHP61326 146 aaKnown RBP8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 NAA20P61599 178 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 TUBB8Q3ZCM7 444 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 CRLF3Q8IUI8 442 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 GLMNQ92990 594 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 ZC3H10Q96K80 434 aaKnown RBP8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 NMRAL1Q9HBL8 299 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 CD93Q9NPY3 652 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 GRID1Q9ULK0 1009 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 ACOT9Q9Y305 439 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 PRSS21Q9Y6M0 314 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 SDK2Q58EX2 2172 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 PRR5-ARHGAP8B1AHC4 643 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 K7ESM1 405 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 RAD51BO15315 384 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 LTA4HP09960 611 aaKnown RBP8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 KRT4P19013 534 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 AOAHP28039 575 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 CCR4P51679 360 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 LRP8Q14114 963 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 ACAP2Q15057 778 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 VN1R5Q7Z5H4 357 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 LDB1Q86U70 411 aaPredicted RBP8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 CEP97Q8IW35 865 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 OR2L2Q8NH16 312 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 RHEBL1Q8TAI7 183 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 HM13Q8TCT9 377 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 RELTQ969Z4 430 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 COL26A1Q96A83 441 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 RSRC1Q96IZ7 334 aaKnown RBP8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 BOCQ9BWV1 1114 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 GPR174Q9BXC1 333 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 IGSF5Q9NSI5 407 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 GIMAP4Q9NUV9 329 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 SCHIP1Q9P0W5 487 aaPredicted RBP8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 CRYL1Q9Y2S2 319 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 GPSM3Q9Y4H4 160 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 PCDHGA2Q9Y5H1 932 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 DGKBQ9Y6T7 804 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 CEP192Q8TEP8 1941 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 SEC16AO15027 2179 aa8.27□□□□□ -1.09
PTPDC1-201ENST00000288976 A0A096LPK6 155 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 PRR19A6NJB7 356 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 KMOO15229 486 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 GUCA1CO95843 209 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 ENO2P09104 434 aaPredicted RBP8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 NR1D1P20393 614 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 HOXD12P35452 270 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 TAS2R39P59534 338 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 AGAP9Q5VTM2 703 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 LRRTM4Q86VH4 590 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 MED8Q96G25 268 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 WDR92Q96MX6 357 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 ACAT2Q9BWD1 397 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 TFB2MQ9H5Q4 396 aaKnown RBP8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 PSD3Q9NYI0 1048 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 ATXN10Q9UBB4 475 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 SPACA6W5XKT8 324 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 FSBPO95073 299 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 PYGBP11216 843 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 HTR1BP28222 390 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms