RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 POU4F1Q01851 419 aa12.62□□□□□ -0.39
HERC6-202ENST00000273960 MXD1Q05195 221 aa12.62□□□□□ -0.39
HERC6-202ENST00000273960 CCDC85BQ15834 202 aaPredicted RBP12.62□□□□□ -0.39
HERC6-202ENST00000273960 SLC25A52Q3SY17 297 aa12.62□□□□□ -0.39
HERC6-202ENST00000273960 KCTD11Q693B1 232 aa12.62□□□□□ -0.39
HERC6-202ENST00000273960 GPR153Q6NV75 609 aa12.62□□□□□ -0.39
HERC6-202ENST00000273960 PHF10Q8WUB8 498 aaKnown RBP12.62□□□□□ -0.39
HERC6-202ENST00000273960 TEKT5Q96M29 485 aa12.62□□□□□ -0.39
HERC6-202ENST00000273960 IKZF5Q9H5V7 419 aa12.62□□□□□ -0.39
HERC6-202ENST00000273960 SDR39U1Q9NRG7 319 aaPredicted RBP12.62□□□□□ -0.39
HERC6-202ENST00000273960 RBM22Q9NW64 420 aaKnown RBP eCLIP12.62□□□□□ -0.39
HERC6-202ENST00000273960 OR12D3Q9UGF7 316 aa12.62□□□□□ -0.39
HERC6-202ENST00000273960 CDH9Q9ULB4 789 aa12.62□□□□□ -0.39
HERC6-202ENST00000273960 H3BUI4 141 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 SCO2O43819 266 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 USP17L7P0C7H9 530 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 DCTP40126 519 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 SLC15A1P46059 708 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 DNAJB13P59910 316 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 TAF1CQ15572 869 aaPredicted RBP12.61□□□□□ -0.39
HERC6-202ENST00000273960 TARBP2Q15633 366 aaKnown RBP12.61□□□□□ -0.39
HERC6-202ENST00000273960 LRRC26Q2I0M4 334 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 HIPK1Q86Z02 1210 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 CCDC28AQ8IWP9 274 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 GTF2H4Q92759 462 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 CCDC126Q96EE4 140 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 RBM4BQ9BQ04 359 aaKnown RBP12.61□□□□□ -0.39
HERC6-202ENST00000273960 KIFC1Q9BW19 673 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 RBM4Q9BWF3 364 aaKnown RBP12.61□□□□□ -0.39
HERC6-202ENST00000273960 NARFLQ9H6Q4 476 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 ACOT13Q9NPJ3 140 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 USE1Q9NZ43 259 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 VAPAQ9P0L0 249 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 CDK2AP1O14519 115 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 DCLK1O15075 740 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 B3GALT4O96024 378 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 MSH3P20585 1137 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 GRK3P35626 688 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 IDH2P48735 452 aaKnown RBP12.61□□□□□ -0.39
HERC6-202ENST00000273960 HERVK_113P63132 956 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 CRY1Q16526 586 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 SLC22A9Q8IVM8 553 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 RIMKLAQ8IXN7 391 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 C7orf57Q8NEG2 295 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 FLCNQ8NFG4 579 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 ZNF419Q96HQ0 510 aaPredicted RBP12.61□□□□□ -0.39
HERC6-202ENST00000273960 MED30Q96HR3 178 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 KLHL5Q96PQ7 755 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 ERVK-6Q9BXR3 956 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 TKTL2Q9H0I9 626 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 NSMCE4AQ9NXX6 385 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 VNN3Q9NY84 501 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 POLR3HQ9Y535 204 aaPredicted RBP12.61□□□□□ -0.39
HERC6-202ENST00000273960 FFAR3O14843 346 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 GPR42O15529 346 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 OR4F21O95013 312 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 SERPINA1P01009 418 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 C7P10643 843 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 UMPSP11172 480 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 G6PDP11413 515 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 PAMP19021 973 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 SSTR4P31391 388 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 TKTL1P51854 596 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 FCGRTP55899 365 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 CACNB2Q08289 660 aaPredicted RBP12.61□□□□□ -0.39
HERC6-202ENST00000273960 IRF3Q14653 427 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 NR6A1Q15406 480 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 NLRP8Q86W28 1048 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 GRAMD2AQ8IUY3 354 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 P3H2Q8IVL5 708 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 TMEM199Q8N511 208 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 OR2T11Q8NH01 316 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 BTN2A3PQ96KV6 586 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 TBATAQ96M53 351 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 DNAJB9Q9UBS3 223 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 RNF112Q9ULX5 631 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 PKP3Q9Y446 797 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 GPR45Q9Y5Y3 372 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 SSC5DA1L4H1 1573 aa12.61□□□□□ -0.39
HERC6-202ENST00000273960 A0A0G2JMP0 313 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 A0A0U1RQS6 177 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 PNMA8CA0A1B0GUJ8 204 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 SAGE2PA6NJ88 616 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 YJEFN3A6XGL0 299 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 TSPAN4O14817 238 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 ZNF157P51786 506 aaPredicted RBP12.6□□□□□ -0.39
HERC6-202ENST00000273960 NKX3-2P78367 333 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 FAM189BP81408 668 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 PTGR1Q14914 329 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 GPR142Q7Z601 462 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 GLCCI1Q86VQ1 547 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 SLC44A2Q8IWA5 706 aaPredicted RBP12.6□□□□□ -0.39
HERC6-202ENST00000273960 CAMKK1Q8N5S9 505 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 AMER2Q8N7J2 671 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 GIPC2Q8TF65 315 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 YIPF6Q96EC8 236 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 GFM1Q96RP9 751 aaKnown RBP12.6□□□□□ -0.39
HERC6-202ENST00000273960 ULBP1Q9BZM6 244 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 DNMT3LQ9UJW3 386 aa12.6□□□□□ -0.39
HERC6-202ENST00000273960 RNF6Q9Y252 685 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms