RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 RBMXL3Q8N7X1 1067 aaKnown RBP8.7□□□□□ -1.02
TPM3-201ENST00000271850 ENDOVQ8N8Q3 282 aaKnown RBP8.7□□□□□ -1.02
TPM3-201ENST00000271850 FDCSPQ8NFU4 85 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 CPT1CQ8TCG5 803 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 ZNF398Q8TD17 642 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 LRFN5Q96NI6 719 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 SRPK1Q96SB4 655 aaKnown RBP8.7□□□□□ -1.02
TPM3-201ENST00000271850 CD180Q99467 661 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 FAM118BQ9BPY3 351 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 GPR87Q9BY21 358 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 ING2Q9H160 280 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 GBA3Q9H227 469 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 OR52A5Q9H2C5 316 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 DEF6Q9H4E7 631 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 FAM96AQ9H5X1 160 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 KCND1Q9NSA2 647 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 HACD3Q9P035 362 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 POMT2Q9UKY4 750 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 FARSAQ9Y285 508 aaKnown RBP8.7□□□□□ -1.02
TPM3-201ENST00000271850 MAP4K5Q9Y4K4 846 aa8.7□□□□□ -1.02
TPM3-201ENST00000271850 PCDHGA9Q9Y5G4 932 aaKnown RBP8.7□□□□□ -1.02
TPM3-201ENST00000271850 ESPL1Q14674 2120 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 IGLV3-16A0A075B6K0 115 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 UBA6A0AVT1 1052 aaPredicted RBP8.69□□□□□ -1.02
TPM3-201ENST00000271850 GOLGA6L19H0YKK7 550 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 MEN1O00255 615 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 LDB2O43679 373 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 SPOPO43791 374 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 ZBTB11O95625 1053 aaPredicted RBP8.69□□□□□ -1.02
TPM3-201ENST00000271850 IGHA1P01876 353 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 PVRP15151 417 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 MSH3P20585 1137 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 GABRA4P48169 554 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 LMAN1P49257 510 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 CCL11P51671 97 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 TPM4P67936 248 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 MRPL49Q13405 166 aaKnown RBP8.69□□□□□ -1.02
TPM3-201ENST00000271850 XRCC4Q13426 336 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 ITGA9Q13797 1035 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 TRIM14Q14142 442 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 TFDP2Q14188 446 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 TAF1AQ15573 450 aaPredicted RBP8.69□□□□□ -1.02
TPM3-201ENST00000271850 ZIC1Q15915 447 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 PTCHD3Q3KNS1 767 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 ZDHHC20Q5W0Z9 365 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 OOSP2Q86WS3 158 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 TMEM126BQ8IUX1 230 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 ADGRF3Q8IZF5 1079 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 OR4E2Q8NGC2 313 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 FLVCR1-AS1Q8TAF5 88 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 THAP4Q8WY91 577 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 MR1Q95460 341 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 CCDC42Q96M95 316 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 TTC25Q96NG3 672 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 SLC25A23Q9BV35 468 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 HEMGNQ9BXL5 484 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 PITPNM3Q9BZ71 974 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 ZCCHC2Q9C0B9 1178 aaKnown RBP8.69□□□□□ -1.02
TPM3-201ENST00000271850 KLHL25Q9H0H3 589 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 XKR8Q9H6D3 395 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 ASB8Q9H765 288 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 COG4Q9H9E3 785 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 FAM60AQ9NP50 221 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 LATS2Q9NRM7 1088 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 RSPH14Q9UHP6 348 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 TCFL5Q9UL49 500 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 INTUQ9ULD6 942 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 SNRNP200O75643 2136 aaKnown RBP8.69□□□□□ -1.02
TPM3-201ENST00000271850 CELSR2Q9HCU4 2923 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 MYO9AB2RTY4 2548 aa8.69□□□□□ -1.02
TPM3-201ENST00000271850 CENPEQ02224 2701 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 CRYBG3Q68DQ2 2970 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 CCDC88CQ9P219 2028 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 TRBV5-4A0A0C4DH59 114 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 HACD1B0YJ81 288 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 TCP11X1B4DZS4 312 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 TMEM150CB9EJG8 249 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 APOC4-APOC2K7ER74 178 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 STX7O15400 261 aaKnown RBP8.68□□□□□ -1.02
TPM3-201ENST00000271850 KLF7O75840 302 aaPredicted RBP8.68□□□□□ -1.02
TPM3-201ENST00000271850 APOC2P02655 101 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 POLBP06746 335 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 RAB40ALP0C0E4 278 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 PRDX3P30048 256 aaKnown RBP8.68□□□□□ -1.02
TPM3-201ENST00000271850 AKT1P31749 480 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 PREPP48147 710 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 TMPRSS15P98073 1019 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 ATP1A4Q13733 1029 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 SPARCL1Q14515 664 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 LONRF2Q1L5Z9 754 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 KCTD11Q693B1 232 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 SLC6A19Q695T7 634 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 CCDC70Q6NSX1 233 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 JMJD6Q6NYC1 403 aaPredicted RBP8.68□□□□□ -1.02
TPM3-201ENST00000271850 CDHR3Q6ZTQ4 885 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 BPHLQ86WA6 291 aaPredicted RBP8.68□□□□□ -1.02
TPM3-201ENST00000271850 PIANPQ8IYJ0 282 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 SYTL1Q8IYJ3 562 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 CFAP206Q8IYR0 622 aa8.68□□□□□ -1.02
TPM3-201ENST00000271850 NXPE1Q8N323 547 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms