RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 ENPEPQ07075 957 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 STARD3Q14849 445 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 ACOX1Q15067 660 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 HEATR6Q6AI08 1181 aaKnown RBP8.63□□□□□ -1.03
VAPB-201ENST00000265619 LIPIQ6XZB0 460 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 FAM183BPQ6ZVS7 135 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 NECAB2Q7Z6G3 386 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 DTWD1Q8N5C7 304 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 HTR3CQ8WXA8 447 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 GON7Q9BXV9 100 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 RHOBTB2Q9BYZ6 727 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 TMEFF2Q9UIK5 374 aaPredicted RBP8.63□□□□□ -1.03
VAPB-201ENST00000265619 ADAM28Q9UKQ2 775 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 KLHL20Q9Y2M5 609 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 SNX8Q9Y5X2 465 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 MIA3Q5JRA6 1907 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 MAGEB16A2A368 324 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 PRR23AA6NEV1 266 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 PDPK1O15530 556 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 ATG13O75143 517 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 AHSGP02765 367 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 SLC10A3P09131 477 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 GPD1P21695 349 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 KCNC1P48547 511 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 SCNN1GP51170 649 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 FRG1Q14331 258 aaKnown RBP8.63□□□□□ -1.03
VAPB-201ENST00000265619 AMHR2Q16671 573 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 KCNMB4Q86W47 210 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 ZC3HC1Q86WB0 502 aaKnown RBP8.63□□□□□ -1.03
VAPB-201ENST00000265619 BEST2Q8NFU1 509 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 RDM1Q8NG50 284 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 MCRS1Q96EZ8 462 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 AURKBQ96GD4 344 aaPredicted RBP8.63□□□□□ -1.03
VAPB-201ENST00000265619 QKIQ96PU8 341 aaKnown RBP eCLIP8.63□□□□□ -1.033e-14■■■■■ 54.8
VAPB-201ENST00000265619 USB1Q9BQ65 265 aaKnown RBP8.63□□□□□ -1.03
VAPB-201ENST00000265619 UQCC2Q9BRT2 126 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 DPEP3Q9H4B8 488 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 PCDHGB1Q9Y5G3 927 aa8.63□□□□□ -1.03
VAPB-201ENST00000265619 WDR81Q562E7 1941 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 A0A1W2PP18 115 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 OR2A25A4D2G3 310 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 KCNK1O00180 336 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 ANGPT2O15123 496 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 NDUFA2O43678 99 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 AIREO43918 545 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 LYPLA2O95372 231 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 CSTF2P33240 577 aaKnown RBP eCLIP8.62□□□□□ -1.03
VAPB-201ENST00000265619 ZFP36L2P47974 494 aaKnown RBP8.62□□□□□ -1.03
VAPB-201ENST00000265619 ARHGAP1Q07960 439 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 GNASQ5JWF2 1037 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 TLK2Q86UE8 772 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 RAB43Q86YS6 212 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 LINC00518Q8N0U6 118 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 PGBD5Q8N414 524 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 SLAIN1Q8ND83 568 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 NLGN4YQ8NFZ3 816 aaPredicted RBP8.62□□□□□ -1.03
VAPB-201ENST00000265619 FBXO30Q8TB52 745 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 PDLIM5Q96HC4 596 aaKnown RBP8.62□□□□□ -1.03
VAPB-201ENST00000265619 VNN3Q9NY84 501 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 UBP1Q9NZI7 540 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 DIMT1Q9UNQ2 313 aaKnown RBP8.62□□□□□ -1.03
VAPB-201ENST00000265619 A0A096LPI6 279 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 A0A0A0MRY4 1105 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 PI15O43692 258 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 MICAL2O94851 1124 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 APOA1P02647 267 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 C21orf33P30042 268 aaPredicted RBP8.62□□□□□ -1.03
VAPB-201ENST00000265619 CA5AP35218 305 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 GLUD2P49448 558 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 ST13P50502 369 aaKnown RBP8.62□□□□□ -1.03
VAPB-201ENST00000265619 YWHAEP62258 255 aaKnown RBP8.62□□□□□ -1.03
VAPB-201ENST00000265619 PRKCDQ05655 676 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 PTPRRQ15256 657 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 FBXO48Q5FWF7 155 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 NCBP2-AS2Q69YL0 99 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 ZNF470Q6ECI4 717 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 CXCL17Q6UXB2 119 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 RASAL3Q86YV0 1011 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 CDKL3Q8IVW4 592 aaPredicted RBP8.62□□□□□ -1.03
VAPB-201ENST00000265619 TMEM151BQ8IW70 566 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 ZNF567Q8N184 647 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 OR10Z1Q8NGY1 313 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 DNAJB3Q8WWF6 145 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 RIT1Q92963 219 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 SPATA13Q96N96 652 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 VAT1Q99536 393 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 CGRRF1Q99675 332 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 HOPXQ9BPY8 73 aaPredicted RBP8.62□□□□□ -1.03
VAPB-201ENST00000265619 MRPL4Q9BYD3 311 aaKnown RBP8.62□□□□□ -1.03
VAPB-201ENST00000265619 ZNF518BQ9C0D4 1074 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 AP5M1Q9H0R1 490 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 RASSF1Q9NS23 344 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 BTRCQ9Y297 605 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 NDUFAF1Q9Y375 327 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 HSPB11Q9Y547 144 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 TEX51A0A1B0GUA7 166 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 TOR1AO14656 332 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 MFSD11O43934 449 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 ZNF30P17039 623 aa8.62□□□□□ -1.03
VAPB-201ENST00000265619 GOT1P17174 413 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms