RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 LTN1O94822 1766 aa17.73■□□□□ 0.43
COL5A3-201ENST00000264828 PTGIRP43119 386 aa17.73■□□□□ 0.43
COL5A3-201ENST00000264828 AP1S2P56377 157 aa17.73■□□□□ 0.43
COL5A3-201ENST00000264828 CDKL1Q00532 357 aa17.73■□□□□ 0.43
COL5A3-201ENST00000264828 DLG1Q12959 904 aa17.73■□□□□ 0.43
COL5A3-201ENST00000264828 MSANTD2Q6P1R3 559 aa17.73■□□□□ 0.43
COL5A3-201ENST00000264828 UNC5BQ8IZJ1 945 aa17.73■□□□□ 0.43
COL5A3-201ENST00000264828 OR7D4Q8NG98 312 aa17.73■□□□□ 0.43
COL5A3-201ENST00000264828 RFKQ969G6 155 aa17.73■□□□□ 0.43
COL5A3-201ENST00000264828 OSBPL7Q9BZF2 842 aa17.73■□□□□ 0.43
COL5A3-201ENST00000264828 PCDHAC1Q9H158 963 aa17.73■□□□□ 0.43
COL5A3-201ENST00000264828 CCDC177Q9NQR7 707 aaPredicted RBP17.73■□□□□ 0.43
COL5A3-201ENST00000264828 CDH4P55283 916 aa17.73■□□□□ 0.43
COL5A3-201ENST00000264828 FAM174BQ3ZCQ3 159 aa17.73■□□□□ 0.43
COL5A3-201ENST00000264828 LRRC20Q8TCA0 184 aa17.73■□□□□ 0.43
COL5A3-201ENST00000264828 GAL3ST4Q96RP7 486 aa17.73■□□□□ 0.43
COL5A3-201ENST00000264828 GATA5Q9BWX5 397 aaPredicted RBP17.73■□□□□ 0.43
COL5A3-201ENST00000264828 COMMD4Q9H0A8 199 aa17.73■□□□□ 0.43
COL5A3-201ENST00000264828 KAT8Q9H7Z6 458 aaKnown RBP17.73■□□□□ 0.43
COL5A3-201ENST00000264828 POMPQ9Y244 141 aa17.73■□□□□ 0.43
COL5A3-201ENST00000264828 SMIM28A0A1B0GU29 152 aa17.73■□□□□ 0.43
COL5A3-201ENST00000264828 COLEC12Q5KU26 742 aa17.73■□□□□ 0.43
COL5A3-201ENST00000264828 ZCCHC12Q6PEW1 402 aa17.73■□□□□ 0.43
COL5A3-201ENST00000264828 EBF4Q9BQW3 602 aa17.73■□□□□ 0.43
COL5A3-201ENST00000264828 LGALS13Q9UHV8 139 aa17.73■□□□□ 0.43
COL5A3-201ENST00000264828 NDUFV1P49821 464 aa17.72■□□□□ 0.43
COL5A3-201ENST00000264828 JAM2P57087 298 aa17.72■□□□□ 0.43
COL5A3-201ENST00000264828 PDE12Q6L8Q7 609 aaKnown RBP17.72■□□□□ 0.43
COL5A3-201ENST00000264828 ADGRG6Q86SQ4 1221 aa17.72■□□□□ 0.43
COL5A3-201ENST00000264828 FSTL5Q8N475 847 aaPredicted RBP17.72■□□□□ 0.43
COL5A3-201ENST00000264828 GPATCH1Q9BRR8 931 aaKnown RBP17.72■□□□□ 0.43
COL5A3-201ENST00000264828 FKBP14Q9NWM8 211 aa17.72■□□□□ 0.43
COL5A3-201ENST00000264828 RCOR3Q9P2K3 495 aaPredicted RBP17.72■□□□□ 0.43
COL5A3-201ENST00000264828 FKBPLQ9UIM3 349 aa17.72■□□□□ 0.43
COL5A3-201ENST00000264828 KLRG2A4D1S0 409 aaPredicted RBP17.72■□□□□ 0.43
COL5A3-201ENST00000264828 ORC5O43913 435 aa17.72■□□□□ 0.43
COL5A3-201ENST00000264828 RNASEH2AO75792 299 aaKnown RBP17.72■□□□□ 0.43
COL5A3-201ENST00000264828 VIPP01282 170 aa17.72■□□□□ 0.43
COL5A3-201ENST00000264828 APOC1P02654 83 aa17.72■□□□□ 0.43
COL5A3-201ENST00000264828 GPR135Q8IZ08 494 aa17.72■□□□□ 0.43
COL5A3-201ENST00000264828 ARHGEF4Q9NR80 690 aa17.72■□□□□ 0.43
COL5A3-201ENST00000264828 PHPT1Q9NRX4 125 aaPredicted RBP17.72■□□□□ 0.43
COL5A3-201ENST00000264828 MTRRQ9UBK8 725 aa17.72■□□□□ 0.43
COL5A3-201ENST00000264828 SHOX2O60902 331 aaPredicted RBP17.72■□□□□ 0.43
COL5A3-201ENST00000264828 TARDBPQ13148 414 aaKnown RBP eCLIP17.72■□□□□ 0.43
COL5A3-201ENST00000264828 SP140Q13342 867 aa17.72■□□□□ 0.43
COL5A3-201ENST00000264828 TSTD2Q5T7W7 516 aa17.72■□□□□ 0.43
COL5A3-201ENST00000264828 ADNP2Q6IQ32 1131 aa17.72■□□□□ 0.43
COL5A3-201ENST00000264828 GAL3ST3Q96A11 431 aa17.72■□□□□ 0.43
COL5A3-201ENST00000264828 IFT27Q9BW83 186 aa17.72■□□□□ 0.43
COL5A3-201ENST00000264828 ARL5AQ9Y689 179 aa17.72■□□□□ 0.43
COL5A3-201ENST00000264828 ZSCAN5BA6NJL1 495 aa17.72■□□□□ 0.43
COL5A3-201ENST00000264828 B4GALT4O60513 344 aa17.72■□□□□ 0.43
COL5A3-201ENST00000264828 CSN2P05814 226 aa17.72■□□□□ 0.43
COL5A3-201ENST00000264828 DDX6P26196 483 aaKnown RBP eCLIP17.72■□□□□ 0.43
COL5A3-201ENST00000264828 LRRC73Q5JTD7 316 aa17.72■□□□□ 0.43
COL5A3-201ENST00000264828 RANBP3LQ86VV4 465 aaPredicted RBP17.72■□□□□ 0.43
COL5A3-201ENST00000264828 OR4C6Q8NH72 309 aa17.72■□□□□ 0.43
COL5A3-201ENST00000264828 KLRG1Q96E93 195 aa17.72■□□□□ 0.43
COL5A3-201ENST00000264828 MCCC1Q96RQ3 725 aaPredicted RBP17.72■□□□□ 0.43
COL5A3-201ENST00000264828 MON2Q7Z3U7 1717 aa17.72■□□□□ 0.43
COL5A3-201ENST00000264828 RHOQP17081 205 aa17.72■□□□□ 0.43
COL5A3-201ENST00000264828 MAN2A2P49641 1150 aa17.72■□□□□ 0.43
COL5A3-201ENST00000264828 OR2B6P58173 313 aa17.72■□□□□ 0.43
COL5A3-201ENST00000264828 DCDC1P59894 354 aa17.72■□□□□ 0.43
COL5A3-201ENST00000264828 LAPTM5Q13571 262 aa17.72■□□□□ 0.43
COL5A3-201ENST00000264828 IFI44LQ53G44 452 aa17.72■□□□□ 0.43
COL5A3-201ENST00000264828 METTL21CQ5VZV1 264 aa17.72■□□□□ 0.43
COL5A3-201ENST00000264828 BEND7Q8N7W2 519 aaPredicted RBP17.72■□□□□ 0.43
COL5A3-201ENST00000264828 CDK15Q96Q40 435 aa17.72■□□□□ 0.43
COL5A3-201ENST00000264828 MARK1Q9P0L2 795 aa17.72■□□□□ 0.43
COL5A3-201ENST00000264828 GLUD1P00367 558 aa17.71■□□□□ 0.43
COL5A3-201ENST00000264828 ARF3P61204 181 aaPredicted RBP17.71■□□□□ 0.43
COL5A3-201ENST00000264828 ARF1P84077 181 aaKnown RBP17.71■□□□□ 0.43
COL5A3-201ENST00000264828 ABHD15Q6UXT9 468 aa17.71■□□□□ 0.43
COL5A3-201ENST00000264828 DQX1Q8TE96 717 aaKnown RBP17.71■□□□□ 0.43
COL5A3-201ENST00000264828 LRRC72A6NJI9 287 aa17.71■□□□□ 0.43
COL5A3-201ENST00000264828 PER2O15055 1255 aa17.71■□□□□ 0.43
COL5A3-201ENST00000264828 CMPK1P30085 196 aa17.71■□□□□ 0.43
COL5A3-201ENST00000264828 CLCNKBP51801 687 aa17.71■□□□□ 0.43
COL5A3-201ENST00000264828 MINDY4Q4G0A6 757 aa17.71■□□□□ 0.43
COL5A3-201ENST00000264828 KCNC2Q96PR1 638 aa17.71■□□□□ 0.43
COL5A3-201ENST00000264828 TAS2R7Q9NYW3 318 aa17.71■□□□□ 0.43
COL5A3-201ENST00000264828 OGNP20774 298 aaKnown RBP17.71■□□□□ 0.43
COL5A3-201ENST00000264828 ZNF234Q14588 700 aa17.71■□□□□ 0.43
COL5A3-201ENST00000264828 NR2E3Q9Y5X4 410 aa17.71■□□□□ 0.43
COL5A3-201ENST00000264828 KDM4BO94953 1096 aa17.71■□□□□ 0.43
COL5A3-201ENST00000264828 RORCP51449 518 aa17.71■□□□□ 0.43
COL5A3-201ENST00000264828 SEC13P55735 322 aa17.71■□□□□ 0.43
COL5A3-201ENST00000264828 SEMG2Q02383 582 aa17.71■□□□□ 0.43
COL5A3-201ENST00000264828 ATP13A5Q4VNC0 1218 aa17.71■□□□□ 0.43
COL5A3-201ENST00000264828 ANKRD23Q86SG2 305 aa17.71■□□□□ 0.43
COL5A3-201ENST00000264828 LRRC57Q8N9N7 239 aa17.71■□□□□ 0.43
COL5A3-201ENST00000264828 NKD2Q969F2 451 aaPredicted RBP17.71■□□□□ 0.43
COL5A3-201ENST00000264828 NSMCE3Q96MG7 304 aa17.71■□□□□ 0.43
COL5A3-201ENST00000264828 INTS10Q9NVR2 710 aaKnown RBP17.71■□□□□ 0.43
COL5A3-201ENST00000264828 UPB1Q9UBR1 384 aa17.71■□□□□ 0.43
COL5A3-201ENST00000264828 COL1A2P08123 1366 aa17.71■□□□□ 0.43
COL5A3-201ENST00000264828 DNAJA2O60884 412 aa17.71■□□□□ 0.42
COL5A3-201ENST00000264828 PPP1R11O60927 126 aaPredicted RBP17.71■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms