RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 THRBP10828 461 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 HOXA11P31270 313 aaPredicted RBP13.76□□□□□ -0.21
CDH3-201ENST00000264012 HEPACAMQ14CZ8 416 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 TIFABQ6ZNK6 161 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 ZNF366Q8N895 744 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 BTBD9Q96Q07 612 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 SLC2A13Q96QE2 648 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 PTPN18Q99952 460 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 SPRTNQ9H040 489 aaPredicted RBP13.76□□□□□ -0.21
CDH3-201ENST00000264012 USP29Q9HBJ7 922 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 RASSF1Q9NS23 344 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 PCDHGB3Q9Y5G1 929 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 TMEM233B4DJY2 109 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 ZBTB11O95625 1053 aaPredicted RBP13.76□□□□□ -0.21
CDH3-201ENST00000264012 IFNW1P05000 195 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 TPP2P29144 1249 aaPredicted RBP13.76□□□□□ -0.21
CDH3-201ENST00000264012 CCNHP51946 323 aaPredicted RBP13.76□□□□□ -0.21
CDH3-201ENST00000264012 MTPNP58546 118 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 NR1D2Q14995 579 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 ACSBG2Q5FVE4 666 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 PPP2R2DQ66LE6 453 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 THAP5Q7Z6K1 395 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 PARP8Q8N3A8 854 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 DCAF4L2Q8NA75 395 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 SLC9A6Q92581 669 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 NUS1Q96E22 293 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 C12orf66Q96MD2 445 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 PRICKLE1Q96MT3 831 aaPredicted RBP13.76□□□□□ -0.21
CDH3-201ENST00000264012 PCBD2Q9H0N5 130 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 PRDM8Q9NQV8 689 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 PTGFRNQ9P2B2 879 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 IFT80Q9P2H3 777 aaPredicted RBP13.76□□□□□ -0.21
CDH3-201ENST00000264012 IL36AQ9UHA7 158 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 SLC7A8Q9UHI5 535 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 LAMB4A4D0S4 1761 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 HAS3O00219 553 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 NR2F6P10588 404 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 GSCP56915 257 aaPredicted RBP13.76□□□□□ -0.21
CDH3-201ENST00000264012 MED22Q15528 200 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 MYLK3Q32MK0 819 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 B3GNT9Q6UX72 402 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 CLDN19Q8N6F1 224 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 PIH1D2Q8WWB5 315 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 LMLNQ96KR4 655 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 PLGRKTQ9HBL7 147 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 GALPQ9UBC7 116 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 NDRG2Q9UN36 371 aaKnown RBP13.76□□□□□ -0.21
CDH3-201ENST00000264012 TNFRSF11BO00300 401 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 CDC7O00311 574 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 SLC35G6P0C7Q6 338 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 ZNF865P0CJ78 1059 aaPredicted RBP13.76□□□□□ -0.21
CDH3-201ENST00000264012 ADH5P11766 374 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 ETS2P15036 469 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 DDX6P26196 483 aaKnown RBP eCLIP13.76□□□□□ -0.21
CDH3-201ENST00000264012 HMGCS1Q01581 520 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 IGSF21Q96ID5 467 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 C1orf74Q96LT6 269 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 AKTIPQ9H8T0 292 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 SQORQ9Y6N5 450 aa13.76□□□□□ -0.21
CDH3-201ENST00000264012 H3BNH8 94 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 SLC25A12O75746 678 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 FGF18O76093 207 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 CCNFP41002 786 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 STC1P52823 247 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 NFKB2Q00653 900 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 KLHL12Q53G59 568 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 SMYD5Q6GMV2 418 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 ZBTB46Q86UZ6 589 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 CILP2Q8IUL8 1156 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 AHI1Q8N157 1196 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 TSGA13Q96PP4 275 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 PLEKHG4BQ96PX9 1271 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 DPEP2Q9H4A9 486 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 CRNNQ9UBG3 495 aaPredicted RBP13.75□□□□□ -0.21
CDH3-201ENST00000264012 ZDHHC2Q9UIJ5 367 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 FBXW2Q9UKT8 454 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 WNT6Q9Y6F9 365 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 BCKDKO14874 412 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 INPPL1O15357 1258 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 HSPB3Q12988 150 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 HERC3Q15034 1050 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 C2orf27AQ580R0 203 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 MMAAQ8IVH4 418 aaKnown RBP13.75□□□□□ -0.21
CDH3-201ENST00000264012 GAS2L1Q99501 681 aaPredicted RBP13.75□□□□□ -0.21
CDH3-201ENST00000264012 MIPEPQ99797 713 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 ZSCAN5AQ9BUG6 496 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 RAPGEFL1Q9UHV5 662 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 A0A0D9SEW6 157 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 CXCR6O00574 342 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 TOP3BO95985 862 aaKnown RBP13.75□□□□□ -0.21
CDH3-201ENST00000264012 PROZP22891 400 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 PLA2G16P53816 162 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 DPY19L1Q2PZI1 675 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 KCTD21Q4G0X4 260 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 OR10T2Q8NGX3 314 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 OR52J3Q8NH60 311 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 NSMCE3Q96MG7 304 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 GPR62Q9BZJ7 368 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 NT5EP21589 574 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 ACTR3P61158 418 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms