RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 LRRC40Q9H9A6 602 aa11.91□□□□□ -0.5
TRAF4-202ENST00000262396 LRRC4CQ9HCJ2 640 aa11.91□□□□□ -0.5
TRAF4-202ENST00000262396 SEMA5BQ9P283 1151 aa11.91□□□□□ -0.5
TRAF4-202ENST00000262396 PADI2Q9Y2J8 665 aa11.91□□□□□ -0.5
TRAF4-202ENST00000262396 TDRKHQ9Y2W6 561 aaKnown RBP11.91□□□□□ -0.5
TRAF4-202ENST00000262396 EPN1Q9Y6I3 576 aaPredicted RBP11.91□□□□□ -0.5
TRAF4-202ENST00000262396 BOD1L1Q8NFC6 3051 aa11.9□□□□□ -0.5
TRAF4-202ENST00000262396 C17orf113A0A1B0GUU1 675 aa11.9□□□□□ -0.5
TRAF4-202ENST00000262396 A6NL46 340 aa11.9□□□□□ -0.5
TRAF4-202ENST00000262396 E7EVH7 732 aa11.9□□□□□ -0.5
TRAF4-202ENST00000262396 QSOX1O00391 747 aa11.9□□□□□ -0.5
TRAF4-202ENST00000262396 CCL22O00626 93 aa11.9□□□□□ -0.5
TRAF4-202ENST00000262396 FTH1P02794 183 aa11.9□□□□□ -0.5
TRAF4-202ENST00000262396 TPH1P17752 444 aa11.9□□□□□ -0.5
TRAF4-202ENST00000262396 RRADP55042 308 aa11.9□□□□□ -0.5
TRAF4-202ENST00000262396 ITGA1P56199 1179 aa11.9□□□□□ -0.5
TRAF4-202ENST00000262396 POU6F1Q14863 301 aa11.9□□□□□ -0.5
TRAF4-202ENST00000262396 BRD3Q15059 726 aa11.9□□□□□ -0.5
TRAF4-202ENST00000262396 PARP6Q2NL67 630 aa11.9□□□□□ -0.5
TRAF4-202ENST00000262396 P3H1Q32P28 736 aa11.9□□□□□ -0.5
TRAF4-202ENST00000262396 SERPINA9Q86WD7 417 aa11.9□□□□□ -0.5
TRAF4-202ENST00000262396 RAB43Q86YS6 212 aa11.9□□□□□ -0.5
TRAF4-202ENST00000262396 APLFQ8IW19 511 aaPredicted RBP11.9□□□□□ -0.5
TRAF4-202ENST00000262396 SYCE1Q8N0S2 351 aa11.9□□□□□ -0.5
TRAF4-202ENST00000262396 ENDOVQ8N8Q3 282 aaKnown RBP11.9□□□□□ -0.5
TRAF4-202ENST00000262396 TFGQ92734 400 aaPredicted RBP11.9□□□□□ -0.5
TRAF4-202ENST00000262396 ZNF501Q96CX3 271 aaPredicted RBP11.9□□□□□ -0.5
TRAF4-202ENST00000262396 DNAJC1Q96KC8 554 aaKnown RBP11.9□□□□□ -0.5
TRAF4-202ENST00000262396 RUFY1Q96T51 708 aa11.9□□□□□ -0.5
TRAF4-202ENST00000262396 C17orf62Q9BQA9 187 aa11.9□□□□□ -0.5
TRAF4-202ENST00000262396 KLHL25Q9H0H3 589 aa11.9□□□□□ -0.5
TRAF4-202ENST00000262396 COG4Q9H9E3 785 aa11.9□□□□□ -0.5
TRAF4-202ENST00000262396 SLAMF7Q9NQ25 335 aa11.9□□□□□ -0.5
TRAF4-202ENST00000262396 LATS2Q9NRM7 1088 aa11.9□□□□□ -0.5
TRAF4-202ENST00000262396 POMT2Q9UKY4 750 aa11.9□□□□□ -0.5
TRAF4-202ENST00000262396 ASF1AQ9Y294 204 aa11.9□□□□□ -0.5
TRAF4-202ENST00000262396 ZNF451Q9Y4E5 1061 aa11.9□□□□□ -0.5
TRAF4-202ENST00000262396 CCDC78A2IDD5 438 aa11.89□□□□□ -0.51
TRAF4-202ENST00000262396 SOWAHDA6NJG2 315 aa11.89□□□□□ -0.51
TRAF4-202ENST00000262396 ZNF185O15231 689 aa11.89□□□□□ -0.51
TRAF4-202ENST00000262396 TMEM63AO94886 807 aa11.89□□□□□ -0.51
TRAF4-202ENST00000262396 AGFG2O95081 481 aa11.89□□□□□ -0.51
TRAF4-202ENST00000262396 LCA5LO95447 670 aa11.89□□□□□ -0.51
TRAF4-202ENST00000262396 GSTM1P09488 218 aa11.89□□□□□ -0.51
TRAF4-202ENST00000262396 ACRV1P26436 265 aa11.89□□□□□ -0.51
TRAF4-202ENST00000262396 PRDX3P30048 256 aaKnown RBP11.89□□□□□ -0.51
TRAF4-202ENST00000262396 ADRA1AP35348 466 aa11.89□□□□□ -0.51
TRAF4-202ENST00000262396 CD151P48509 253 aa11.89□□□□□ -0.51
TRAF4-202ENST00000262396 ZNF140P52738 457 aaPredicted RBP11.89□□□□□ -0.51
TRAF4-202ENST00000262396 XIAPP98170 497 aa11.89□□□□□ -0.51
TRAF4-202ENST00000262396 GSTM4Q03013 218 aa11.89□□□□□ -0.51
TRAF4-202ENST00000262396 CACNG1Q06432 222 aa11.89□□□□□ -0.51
TRAF4-202ENST00000262396 RPA4Q13156 261 aa11.89□□□□□ -0.51
TRAF4-202ENST00000262396 GPS2Q13227 327 aa11.89□□□□□ -0.51
TRAF4-202ENST00000262396 LAMB3Q13751 1172 aa11.89□□□□□ -0.51
TRAF4-202ENST00000262396 FHL5Q5TD97 284 aa11.89□□□□□ -0.51
TRAF4-202ENST00000262396 MLIPQ5VWP3 458 aa11.89□□□□□ -0.51
TRAF4-202ENST00000262396 IZUMO3Q5VZ72 239 aa11.89□□□□□ -0.51
TRAF4-202ENST00000262396 CPZQ66K79 652 aa11.89□□□□□ -0.51
TRAF4-202ENST00000262396 CAPRIN2Q6IMN6 1127 aaKnown RBP11.89□□□□□ -0.51
TRAF4-202ENST00000262396 PPP1R21Q6ZMI0 780 aa11.89□□□□□ -0.51
TRAF4-202ENST00000262396 SYTL1Q8IYJ3 562 aa11.89□□□□□ -0.51
TRAF4-202ENST00000262396 LILRA3Q8N6C8 439 aaPredicted RBP11.89□□□□□ -0.51
TRAF4-202ENST00000262396 FAM71DQ8N9W8 422 aa11.89□□□□□ -0.51
TRAF4-202ENST00000262396 OR52E1Q8NGJ3 308 aa11.89□□□□□ -0.51
TRAF4-202ENST00000262396 GSDMBQ8TAX9 411 aa11.89□□□□□ -0.51
TRAF4-202ENST00000262396 CPT1CQ8TCG5 803 aa11.89□□□□□ -0.51
TRAF4-202ENST00000262396 ELMO1Q92556 727 aa11.89□□□□□ -0.51
TRAF4-202ENST00000262396 SGSM3Q96HU1 749 aa11.89□□□□□ -0.51
TRAF4-202ENST00000262396 PPM1MQ96MI6 270 aa11.89□□□□□ -0.51
TRAF4-202ENST00000262396 PANX2Q96RD6 677 aa11.89□□□□□ -0.51
TRAF4-202ENST00000262396 TSSK1BQ9BXA7 367 aa11.89□□□□□ -0.51
TRAF4-202ENST00000262396 NLNQ9BYT8 704 aa11.89□□□□□ -0.51
TRAF4-202ENST00000262396 TRIM55Q9BYV6 548 aa11.89□□□□□ -0.51
TRAF4-202ENST00000262396 XKR8Q9H6D3 395 aa11.89□□□□□ -0.51
TRAF4-202ENST00000262396 AKIRIN1Q9H9L7 192 aaPredicted RBP11.89□□□□□ -0.51
TRAF4-202ENST00000262396 TXLNGQ9NUQ3 528 aa11.89□□□□□ -0.51
TRAF4-202ENST00000262396 ACTR10Q9NZ32 417 aa11.89□□□□□ -0.51
TRAF4-202ENST00000262396 NDOR1Q9UHB4 597 aa11.89□□□□□ -0.51
TRAF4-202ENST00000262396 BTRCQ9Y297 605 aa11.89□□□□□ -0.51
TRAF4-202ENST00000262396 K7EM74 188 aa11.88□□□□□ -0.51
TRAF4-202ENST00000262396 BTN3A1O00481 513 aa11.88□□□□□ -0.51
TRAF4-202ENST00000262396 PEX12O00623 359 aa11.88□□□□□ -0.51
TRAF4-202ENST00000262396 DPM1O60762 260 aa11.88□□□□□ -0.51
TRAF4-202ENST00000262396 AP2A2O94973 939 aa11.88□□□□□ -0.51
TRAF4-202ENST00000262396 RAB40ALP0C0E4 278 aa11.88□□□□□ -0.51
TRAF4-202ENST00000262396 OR56A5P0C7T3 313 aa11.88□□□□□ -0.51
TRAF4-202ENST00000262396 ST6GAL1P15907 406 aa11.88□□□□□ -0.51
TRAF4-202ENST00000262396 OTX2P32243 289 aa11.88□□□□□ -0.51
TRAF4-202ENST00000262396 SHMT2P34897 504 aa11.88□□□□□ -0.51
TRAF4-202ENST00000262396 PTPN7P35236 360 aa11.88□□□□□ -0.51
TRAF4-202ENST00000262396 PPARGP37231 505 aaPredicted RBP11.88□□□□□ -0.51
TRAF4-202ENST00000262396 NSG1P42857 185 aa11.88□□□□□ -0.51
TRAF4-202ENST00000262396 PTGIRP43119 386 aa11.88□□□□□ -0.51
TRAF4-202ENST00000262396 VAV2P52735 878 aa11.88□□□□□ -0.51
TRAF4-202ENST00000262396 KIF5AQ12840 1032 aa11.88□□□□□ -0.51
TRAF4-202ENST00000262396 BOP1Q14137 746 aaKnown RBP11.88□□□□□ -0.51
TRAF4-202ENST00000262396 PTCHD3Q3KNS1 767 aa11.88□□□□□ -0.51
TRAF4-202ENST00000262396 PRAMEF17Q5VTA0 474 aa11.88□□□□□ -0.51
TRAF4-202ENST00000262396 LINC00523Q86TU6 105 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms