RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 FGF10O15520 208 aaPredicted RBP9.94□□□□□ -0.82
PALB2-201ENST00000261584 FFAR2O15552 330 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 CELF2O95319 508 aaKnown RBP9.94□□□□□ -0.82
PALB2-201ENST00000261584 MLYCDO95822 493 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 RAP2AP10114 183 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 CD1DP15813 335 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 TCF3P15923 654 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 PORP16435 677 aaPredicted RBP9.94□□□□□ -0.82
PALB2-201ENST00000261584 LPOP22079 712 aaPredicted RBP9.94□□□□□ -0.82
PALB2-201ENST00000261584 GPX3P22352 226 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 PIGAP37287 484 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 CTSKP43235 329 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 SLC11A2P49281 568 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 CDH12P55289 794 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 DUSP28Q4G0W2 176 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 ZNF773Q6PK81 442 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 SLC34A3Q8N130 599 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 KAT2AQ92830 837 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 Q96MT0 163 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 RNF38Q9H0F5 515 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 C11orf16Q9NQ32 467 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 TIGARQ9NQ88 270 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 SNTG1Q9NSN8 517 aa9.94□□□□□ -0.82
PALB2-201ENST00000261584 ZFP37Q9Y6Q3 630 aaPredicted RBP9.94□□□□□ -0.82
PALB2-201ENST00000261584 COL22A1Q8NFW1 1626 aaPredicted RBP9.94□□□□□ -0.82
PALB2-201ENST00000261584 SCN9AQ15858 1988 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 LAMB1P07942 1786 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 GSAPA4D1B5 854 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 KRT6AP02538 564 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 KRT6BP04259 564 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 TYMPP19971 482 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 ARNTP27540 789 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 HOXD12P35452 270 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 KRT6CP48668 564 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 SRP54P61011 504 aaKnown RBP9.93□□□□□ -0.82
PALB2-201ENST00000261584 CD83Q01151 205 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 PDCD4Q53EL6 469 aaKnown RBP9.93□□□□□ -0.82
PALB2-201ENST00000261584 C9orf131Q5VYM1 1079 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 MAL2Q969L2 176 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 BARD1Q99728 777 aaKnown RBP9.93□□□□□ -0.82
PALB2-201ENST00000261584 TTYH2Q9BSA4 534 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 C1QTNF1Q9BXJ1 281 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 MEAF6Q9HAF1 191 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 MAP4K5Q9Y4K4 846 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 BBIP1A8MTZ0 92 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 LOC730098B7Z3J9 87 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 BTBD19C9JJ37 291 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 LDB2O43679 373 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 SERPINI2O75830 405 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 SOX14O95416 240 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 PRAMEF1O95521 474 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 UROSP10746 265 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 ITGALP20701 1170 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 TUFMP49411 452 aaKnown RBP9.93□□□□□ -0.82
PALB2-201ENST00000261584 ATP6V0D1P61421 351 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 ACSM2AQ08AH3 577 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 ACSM2BQ68CK6 577 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 EFL1Q7Z2Z2 1120 aaKnown RBP9.93□□□□□ -0.82
PALB2-201ENST00000261584 PIANPQ8IYJ0 282 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 DEPDC4Q8N2C3 294 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 TMEM181Q9P2C4 612 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 ASB1Q9Y576 335 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 NINQ8N4C6 2090 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 COL16A1Q07092 1604 aaPredicted RBP9.93□□□□□ -0.82
PALB2-201ENST00000261584 A0A0G2JN53 185 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 TMCC2O75069 709 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 GNPDA1P46926 289 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 HUNKP57058 714 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 NKX3-2P78367 333 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 TXNL4AP83876 142 aaKnown RBP9.93□□□□□ -0.82
PALB2-201ENST00000261584 SEMA3AQ14563 771 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 INTS6LQ5JSJ4 861 aaKnown RBP9.93□□□□□ -0.82
PALB2-201ENST00000261584 MFSD14CQ5VZR4 134 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 LARP4Q71RC2 724 aaKnown RBP eCLIP9.93□□□□□ -0.82
PALB2-201ENST00000261584 DEFB128Q7Z7B8 93 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 CLEC14AQ86T13 490 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 RBM12BQ8IXT5 1001 aaKnown RBP9.93□□□□□ -0.82
PALB2-201ENST00000261584 NKAPQ8N5F7 415 aaKnown RBP9.93□□□□□ -0.82
PALB2-201ENST00000261584 CENPIQ92674 756 aaPredicted RBP9.93□□□□□ -0.82
PALB2-201ENST00000261584 MYRFLQ96LU7 910 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 TDRD1Q9BXT4 1180 aaKnown RBP9.93□□□□□ -0.82
PALB2-201ENST00000261584 FAM126AQ9BYI3 521 aaPredicted RBP9.93□□□□□ -0.82
PALB2-201ENST00000261584 RMND5AQ9H871 391 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 TLR8Q9NR97 1041 aaKnown RBP9.93□□□□□ -0.82
PALB2-201ENST00000261584 INTS10Q9NVR2 710 aaKnown RBP9.93□□□□□ -0.82
PALB2-201ENST00000261584 UCKL1Q9NWZ5 548 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 TRPC4Q9UBN4 977 aa9.93□□□□□ -0.82
PALB2-201ENST00000261584 IQCA1LA6NCM1 817 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 TRIM24O15164 1050 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 LZTS3O60299 673 aaPredicted RBP9.92□□□□□ -0.82
PALB2-201ENST00000261584 ABCB7O75027 752 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 PSIP1O75475 530 aaKnown RBP9.92□□□□□ -0.82
PALB2-201ENST00000261584 EPN2O95208 641 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 RASAL1O95294 804 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 EPORP19235 508 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 CPT1AP50416 773 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 ALDH3A2P51648 485 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 ERVK-8P63133 956 aa9.92□□□□□ -0.82
PALB2-201ENST00000261584 CSTF3Q12996 717 aaKnown RBP9.92□□□□□ -0.82
PALB2-201ENST00000261584 PYCR3Q53H96 274 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms