RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 CCDC38Q502W7 563 aa18.48■□□□□ 0.55
TM6SF1-201ENST00000258909 LACTB2Q53H82 288 aaPredicted RBP18.48■□□□□ 0.55
TM6SF1-201ENST00000258909 TMTC4Q5T4D3 741 aa18.48■□□□□ 0.55
TM6SF1-201ENST00000258909 BPHLQ86WA6 291 aaPredicted RBP18.48■□□□□ 0.55
TM6SF1-201ENST00000258909 SLC38A9Q8NBW4 561 aa18.48■□□□□ 0.55
TM6SF1-201ENST00000258909 FCRL4Q96PJ5 515 aa18.48■□□□□ 0.55
TM6SF1-201ENST00000258909 C19orf43Q9BQ61 176 aa18.48■□□□□ 0.55
TM6SF1-201ENST00000258909 KLHL25Q9H0H3 589 aa18.48■□□□□ 0.55
TM6SF1-201ENST00000258909 XKR8Q9H6D3 395 aa18.48■□□□□ 0.55
TM6SF1-201ENST00000258909 SMARCAL1Q9NZC9 954 aa18.48■□□□□ 0.55
TM6SF1-201ENST00000258909 POMT2Q9UKY4 750 aa18.48■□□□□ 0.55
TM6SF1-201ENST00000258909 PRSS21Q9Y6M0 314 aa18.48■□□□□ 0.55
TM6SF1-201ENST00000258909 RELNP78509 3460 aa18.48■□□□□ 0.55
TM6SF1-201ENST00000258909 SPENQ96T58 3664 aaKnown RBP18.48■□□□□ 0.55
TM6SF1-201ENST00000258909 IFRD1O00458 451 aaPredicted RBP18.47■□□□□ 0.55
TM6SF1-201ENST00000258909 BTN3A1O00481 513 aa18.47■□□□□ 0.55
TM6SF1-201ENST00000258909 ZNF189O75820 626 aaPredicted RBP18.47■□□□□ 0.55
TM6SF1-201ENST00000258909 AP2A1O95782 977 aa18.47■□□□□ 0.55
TM6SF1-201ENST00000258909 CACNG1Q06432 222 aa18.47■□□□□ 0.55
TM6SF1-201ENST00000258909 GPS2Q13227 327 aa18.47■□□□□ 0.55
TM6SF1-201ENST00000258909 P3H1Q32P28 736 aa18.47■□□□□ 0.55
TM6SF1-201ENST00000258909 OR52E1Q8NGJ3 308 aa18.47■□□□□ 0.55
TM6SF1-201ENST00000258909 OR52K1Q8NGK4 314 aa18.47■□□□□ 0.55
TM6SF1-201ENST00000258909 STYXQ8WUJ0 223 aa18.47■□□□□ 0.55
TM6SF1-201ENST00000258909 MR1Q95460 341 aa18.47■□□□□ 0.55
TM6SF1-201ENST00000258909 HES6Q96HZ4 224 aa18.47■□□□□ 0.55
TM6SF1-201ENST00000258909 HGH1Q9BTY7 390 aa18.47■□□□□ 0.55
TM6SF1-201ENST00000258909 BTRCQ9Y297 605 aa18.47■□□□□ 0.55
TM6SF1-201ENST00000258909 PTPN13Q12923 2485 aa18.47■□□□□ 0.55
TM6SF1-201ENST00000258909 C21orf140B9A014 251 aa18.46■□□□□ 0.55
TM6SF1-201ENST00000258909 CPNE3O75131 537 aaKnown RBP18.46■□□□□ 0.55
TM6SF1-201ENST00000258909 DNAJB5O75953 348 aa18.46■□□□□ 0.55
TM6SF1-201ENST00000258909 PRDX3P30048 256 aaKnown RBP18.46■□□□□ 0.55
TM6SF1-201ENST00000258909 BRD3Q15059 726 aa18.46■□□□□ 0.55
TM6SF1-201ENST00000258909 IGFBP7Q16270 282 aa18.46■□□□□ 0.55
TM6SF1-201ENST00000258909 NAPRTQ6XQN6 538 aa18.46■□□□□ 0.55
TM6SF1-201ENST00000258909 ALS2CR12Q96Q35 445 aa18.46■□□□□ 0.55
TM6SF1-201ENST00000258909 VPS37BQ9H9H4 285 aa18.46■□□□□ 0.55
TM6SF1-201ENST00000258909 C1GALT1Q9NS00 363 aa18.46■□□□□ 0.55
TM6SF1-201ENST00000258909 ANAPC2Q9UJX6 822 aa18.46■□□□□ 0.55
TM6SF1-201ENST00000258909 TLK1Q9UKI8 766 aa18.46■□□□□ 0.55
TM6SF1-201ENST00000258909 MAN2B2Q9Y2E5 1009 aa18.46■□□□□ 0.55
TM6SF1-201ENST00000258909 PVRP15151 417 aa18.46■□□□□ 0.54
TM6SF1-201ENST00000258909 ST6GAL1P15907 406 aa18.46■□□□□ 0.54
TM6SF1-201ENST00000258909 MSNP26038 577 aaKnown RBP18.46■□□□□ 0.54
TM6SF1-201ENST00000258909 CASRP41180 1078 aa18.46■□□□□ 0.54
TM6SF1-201ENST00000258909 LMAN1P49257 510 aa18.46■□□□□ 0.54
TM6SF1-201ENST00000258909 ABRQ12979 859 aa18.46■□□□□ 0.54
TM6SF1-201ENST00000258909 LCN10Q6JVE6 187 aa18.46■□□□□ 0.54
TM6SF1-201ENST00000258909 PRUNE1Q86TP1 453 aa18.46■□□□□ 0.54
TM6SF1-201ENST00000258909 TFGQ92734 400 aaPredicted RBP18.46■□□□□ 0.54
TM6SF1-201ENST00000258909 CHST8Q9H2A9 424 aa18.46■□□□□ 0.54
TM6SF1-201ENST00000258909 TNRC6AQ8NDV7 1962 aaKnown RBP18.45■□□□□ 0.54
TM6SF1-201ENST00000258909 MED13Q9UHV7 2174 aa18.45■□□□□ 0.54
TM6SF1-201ENST00000258909 CCDC162PA2VCL2 907 aa18.45■□□□□ 0.54
TM6SF1-201ENST00000258909 MROH6A6NGR9 719 aa18.45■□□□□ 0.54
TM6SF1-201ENST00000258909 MKRN2OSH3BPM6 223 aa18.45■□□□□ 0.54
TM6SF1-201ENST00000258909 ARHGAP6O43182 974 aa18.45■□□□□ 0.54
TM6SF1-201ENST00000258909 PSMD3O43242 534 aa18.45■□□□□ 0.54
TM6SF1-201ENST00000258909 PTPN4P29074 926 aa18.45■□□□□ 0.54
TM6SF1-201ENST00000258909 CD151P48509 253 aa18.45■□□□□ 0.54
TM6SF1-201ENST00000258909 RPS15P62841 145 aaKnown RBP18.45■□□□□ 0.54
TM6SF1-201ENST00000258909 IL10RAQ13651 578 aa18.45■□□□□ 0.54
TM6SF1-201ENST00000258909 BOP1Q14137 746 aaKnown RBP18.45■□□□□ 0.54
TM6SF1-201ENST00000258909 FAM69BQ5VUD6 431 aa18.45■□□□□ 0.54
TM6SF1-201ENST00000258909 ZNF449Q6P9G9 518 aa18.45■□□□□ 0.54
TM6SF1-201ENST00000258909 AMIGO1Q86WK6 493 aa18.45■□□□□ 0.54
TM6SF1-201ENST00000258909 CARFQ8N187 725 aa18.45■□□□□ 0.54
TM6SF1-201ENST00000258909 DNAAF3Q8N9W5 541 aa18.45■□□□□ 0.54
TM6SF1-201ENST00000258909 OR1L3Q8NH93 324 aa18.45■□□□□ 0.54
TM6SF1-201ENST00000258909 GPR87Q9BY21 358 aa18.45■□□□□ 0.54
TM6SF1-201ENST00000258909 TRIM55Q9BYV6 548 aa18.45■□□□□ 0.54
TM6SF1-201ENST00000258909 TFB2MQ9H5Q4 396 aaKnown RBP18.45■□□□□ 0.54
TM6SF1-201ENST00000258909 MVB12BQ9H7P6 319 aa18.45■□□□□ 0.54
TM6SF1-201ENST00000258909 ETNK1Q9HBU6 452 aa18.45■□□□□ 0.54
TM6SF1-201ENST00000258909 FARSAQ9Y285 508 aaKnown RBP18.45■□□□□ 0.54
TM6SF1-201ENST00000258909 SEC16AO15027 2179 aa18.44■□□□□ 0.54
TM6SF1-201ENST00000258909 TMEM150CB9EJG8 249 aa18.44■□□□□ 0.54
TM6SF1-201ENST00000258909 MATN2O00339 956 aa18.44■□□□□ 0.54
TM6SF1-201ENST00000258909 RFPL1O75677 317 aa18.44■□□□□ 0.54
TM6SF1-201ENST00000258909 IFNB1P01574 187 aa18.44■□□□□ 0.54
TM6SF1-201ENST00000258909 ETS1P14921 441 aa18.44■□□□□ 0.54
TM6SF1-201ENST00000258909 GRIA1P42261 906 aa18.44■□□□□ 0.54
TM6SF1-201ENST00000258909 PMS2P54278 862 aa18.44■□□□□ 0.54
TM6SF1-201ENST00000258909 CHAF1BQ13112 559 aa18.44■□□□□ 0.54
TM6SF1-201ENST00000258909 RPA4Q13156 261 aa18.44■□□□□ 0.54
TM6SF1-201ENST00000258909 LINC00523Q86TU6 105 aa18.44■□□□□ 0.54
TM6SF1-201ENST00000258909 ADGRF3Q8IZF5 1079 aa18.44■□□□□ 0.54
TM6SF1-201ENST00000258909 TXLNBQ8N3L3 684 aa18.44■□□□□ 0.54
TM6SF1-201ENST00000258909 OR5AR1Q8NGP9 310 aa18.44■□□□□ 0.54
TM6SF1-201ENST00000258909 OR8K5Q8NH50 307 aa18.44■□□□□ 0.54
TM6SF1-201ENST00000258909 C1orf54Q8WWF1 131 aa18.44■□□□□ 0.54
TM6SF1-201ENST00000258909 ELMO1Q92556 727 aa18.44■□□□□ 0.54
TM6SF1-201ENST00000258909 CLIP3Q96DZ5 547 aa18.44■□□□□ 0.54
TM6SF1-201ENST00000258909 FANCEQ9HB96 536 aa18.44■□□□□ 0.54
TM6SF1-201ENST00000258909 SLC2A6Q9UGQ3 507 aa18.44■□□□□ 0.54
TM6SF1-201ENST00000258909 LIASO43766 372 aa18.43■□□□□ 0.54
TM6SF1-201ENST00000258909 AP2A2O94973 939 aa18.43■□□□□ 0.54
TM6SF1-201ENST00000258909 RECKO95980 971 aa18.43■□□□□ 0.54
TM6SF1-201ENST00000258909 PDGFAP04085 211 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms