RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 DNAJB9Q9UBS3 223 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 LIMD1Q9UGP4 676 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 FCF1Q9Y324 198 aaKnown RBP14.95□□□□□ -0.02
DDX56-201ENST00000258772 ANGPTL3Q9Y5C1 460 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 PRSS21Q9Y6M0 314 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 H0Y626 953 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 SLC28A1O00337 649 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 GAPDHSO14556 408 aaPredicted RBP14.95□□□□□ -0.02
DDX56-201ENST00000258772 ULK1O75385 1050 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 CST1P01037 141 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 OR1D2P34982 312 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 CAP1Q01518 475 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 HMGCS1Q01581 520 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 PHKG1Q16816 387 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 SPANXN4Q5MJ08 99 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 ARMC12Q5T9G4 340 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 TTC23Q5W5X9 447 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 Q6ZNX1 250 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 MSRB3Q8IXL7 192 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 C8orf59Q8N0T1 100 aaPredicted RBP14.95□□□□□ -0.02
DDX56-201ENST00000258772 CLDN19Q8N6F1 224 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 GLB1L3Q8NCI6 653 aaPredicted RBP14.95□□□□□ -0.02
DDX56-201ENST00000258772 DBF4BQ8NFT6 615 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 BCL7CQ8WUZ0 217 aaPredicted RBP14.95□□□□□ -0.02
DDX56-201ENST00000258772 PIH1D2Q8WWB5 315 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 SDCCAG3Q96C92 435 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 FEM1AQ9BSK4 669 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 OSBPL10Q9BXB5 764 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 CD244Q9BZW8 370 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 PAIP1Q9H074 479 aaKnown RBP14.95□□□□□ -0.02
DDX56-201ENST00000258772 ASB8Q9H765 288 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 SMURF2Q9HAU4 748 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 HPS4Q9NQG7 708 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 FAM118AQ9NWS6 357 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 IRAK4Q9NWZ3 460 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 SLC25A37Q9NYZ2 338 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 TRPM5Q9NZQ8 1165 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 OPTCQ9UBM4 332 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.95□□□□□ -0.02
DDX56-201ENST00000258772 GNPTGQ9UJJ9 305 aa14.95□□□□□ -0.02
DDX56-201ENST00000258772 ELOVL7A1L3X0 281 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 SEC14L2O76054 403 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 TRIM16O95361 564 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 IL6P05231 212 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 PGRP06401 933 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 DGKAP23743 735 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 CRHBPP24387 322 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 GNPDA1P46926 289 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 TMBIM6P55061 237 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 ANKDD1AQ495B1 522 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 RBM48Q5RL73 367 aaKnown RBP14.94□□□□□ -0.02
DDX56-201ENST00000258772 XAF1Q6GPH4 301 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 ZNF783Q6ZMS7 281 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 GALNT13Q8IUC8 556 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 RBFAQ8N0V3 343 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 LIX1Q8N485 282 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 SNX19Q92543 992 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 APOL5Q9BWW9 433 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 KLF16Q9BXK1 252 aaPredicted RBP14.94□□□□□ -0.02
DDX56-201ENST00000258772 ADNPQ9H2P0 1102 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 ZFP14Q9HCL3 533 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 DNAAF2Q9NVR5 837 aaKnown RBP14.94□□□□□ -0.02
DDX56-201ENST00000258772 WWOXQ9NZC7 414 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 KLQ9UEF7 1012 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 ABCB7O75027 752 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 PGLSO95336 258 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 SREBF2Q12772 1141 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 NFATC3Q12968 1075 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 TUBA3CQ13748 450 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 ZNF829Q3KNS6 432 aaPredicted RBP14.94□□□□□ -0.02
DDX56-201ENST00000258772 RUNDC3AQ59EK9 446 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 SLC8B1Q6J4K2 584 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 ANKRD26P1Q6NSI1 321 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 DUS1LQ6P1R4 473 aaKnown RBP14.94□□□□□ -0.02
DDX56-201ENST00000258772 XKR5Q6UX68 686 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 RNF165Q6ZSG1 346 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 FKBP9P1Q75LS8 142 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 TRIM46Q7Z4K8 759 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 R3HCC1LQ7Z5L2 792 aaKnown RBP14.94□□□□□ -0.02
DDX56-201ENST00000258772 SNX20Q7Z614 316 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 OR52E4Q8NGH9 312 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 TANKQ92844 425 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 ACDQ96AP0 544 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 RHBDF1Q96CC6 855 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 SLC47A1Q96FL8 570 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 SH3GL1Q99961 368 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 TBCDQ9BTW9 1192 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 NTMT1Q9BV86 223 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 CLMPQ9H6B4 373 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 ACTR8Q9H981 624 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 ZFYVE1Q9HBF4 777 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 LMCD1Q9NZU5 365 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 UTS2RQ9UKP6 389 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 ZNF490Q9ULM2 529 aaPredicted RBP14.94□□□□□ -0.02
DDX56-201ENST00000258772 PCDHGA8Q9Y5G5 932 aa14.94□□□□□ -0.02
DDX56-201ENST00000258772 TET1Q8NFU7 2136 aa14.93□□□□□ -0.02
DDX56-201ENST00000258772 C2orf78A6NCI8 922 aa14.93□□□□□ -0.02
DDX56-201ENST00000258772 CXCR6O00574 342 aa14.93□□□□□ -0.02
DDX56-201ENST00000258772 NOBOXO60393 691 aa14.93□□□□□ -0.02
DDX56-201ENST00000258772 TBL1XO60907 577 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms