RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 YAF2Q8IY57 180 aa15.42■□□□□ 0.06
RFX1-201ENST00000254325 TCAIMQ8N3R3 496 aa15.42■□□□□ 0.06
RFX1-201ENST00000254325 SORCS1Q8WY21 1168 aa15.42■□□□□ 0.06
RFX1-201ENST00000254325 AP2M1Q96CW1 435 aa15.42■□□□□ 0.06
RFX1-201ENST00000254325 TUBB1Q9H4B7 451 aa15.42■□□□□ 0.06
RFX1-201ENST00000254325 RAD18Q9NS91 495 aa15.42■□□□□ 0.06
RFX1-201ENST00000254325 MGAT4DA6NG13 374 aa15.42■□□□□ 0.06
RFX1-201ENST00000254325 MATN4O95460 622 aa15.42■□□□□ 0.06
RFX1-201ENST00000254325 C8GP07360 202 aa15.42■□□□□ 0.06
RFX1-201ENST00000254325 LRRC23Q53EV4 343 aaPredicted RBP15.42■□□□□ 0.06
RFX1-201ENST00000254325 Q6ZVL8 140 aa15.42■□□□□ 0.06
RFX1-201ENST00000254325 FUNDC1Q8IVP5 155 aa15.42■□□□□ 0.06
RFX1-201ENST00000254325 MINDY1Q8N5J2 469 aa15.42■□□□□ 0.06
RFX1-201ENST00000254325 CHST14Q8NCH0 376 aa15.42■□□□□ 0.06
RFX1-201ENST00000254325 ZNF555Q8NEP9 628 aa15.42■□□□□ 0.06
RFX1-201ENST00000254325 SCRN2Q96FV2 425 aa15.42■□□□□ 0.06
RFX1-201ENST00000254325 LRRC3Q9BY71 257 aa15.42■□□□□ 0.06
RFX1-201ENST00000254325 MUC13Q9H3R2 512 aa15.42■□□□□ 0.06
RFX1-201ENST00000254325 PAK6Q9NQU5 681 aaPredicted RBP15.42■□□□□ 0.06
RFX1-201ENST00000254325 MAFFQ9ULX9 164 aa15.42■□□□□ 0.06
RFX1-201ENST00000254325 MIA3Q5JRA6 1907 aa15.42■□□□□ 0.06
RFX1-201ENST00000254325 PDLIM1O00151 329 aa15.42■□□□□ 0.06
RFX1-201ENST00000254325 TIMP1P01033 207 aa15.42■□□□□ 0.06
RFX1-201ENST00000254325 SLC7A9P82251 487 aa15.42■□□□□ 0.06
RFX1-201ENST00000254325 CPXM2Q8N436 756 aa15.42■□□□□ 0.06
RFX1-201ENST00000254325 CENPNQ96H22 339 aaPredicted RBP15.42■□□□□ 0.06
RFX1-201ENST00000254325 LRCH3Q96II8 777 aa15.42■□□□□ 0.06
RFX1-201ENST00000254325 RIOK2Q9BVS4 552 aaKnown RBP15.42■□□□□ 0.06
RFX1-201ENST00000254325 SLC32A1Q9H598 525 aa15.42■□□□□ 0.06
RFX1-201ENST00000254325 ZNF385DQ9H6B1 395 aa15.42■□□□□ 0.06
RFX1-201ENST00000254325 TMEM181Q9P2C4 612 aa15.42■□□□□ 0.06
RFX1-201ENST00000254325 GMPR2Q9P2T1 348 aaKnown RBP15.42■□□□□ 0.06
RFX1-201ENST00000254325 H7C0S8 307 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 RHOP08100 348 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 VARSP26640 1264 aaKnown RBP15.41■□□□□ 0.06
RFX1-201ENST00000254325 CLCN7P51798 805 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 EEFSECP57772 596 aaKnown RBP15.41■□□□□ 0.06
RFX1-201ENST00000254325 CHIT1Q13231 466 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 PTGR1Q14914 329 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 ZIK1Q3SY52 487 aaPredicted RBP15.41■□□□□ 0.06
RFX1-201ENST00000254325 ZNF621Q6ZSS3 439 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 TMEM126BQ8IUX1 230 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 POF1BQ8WVV4 589 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 TIFAQ96CG3 184 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 RUBCNLQ9H714 662 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 INTS7Q9NVH2 962 aaKnown RBP15.41■□□□□ 0.06
RFX1-201ENST00000254325 ATP1B2P14415 290 aaPredicted RBP15.41■□□□□ 0.06
RFX1-201ENST00000254325 NEK2P51955 445 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 HK3P52790 923 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 IRX1P78414 480 aaPredicted RBP15.41■□□□□ 0.06
RFX1-201ENST00000254325 MPP7Q5T2T1 576 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 TMTC4Q5T4D3 741 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 NAIF1Q69YI7 327 aaPredicted RBP15.41■□□□□ 0.06
RFX1-201ENST00000254325 NANOGP8Q6NSW7 305 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 GRASPQ7Z6J2 395 aaPredicted RBP15.41■□□□□ 0.06
RFX1-201ENST00000254325 GPR180Q86V85 440 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 ANKRD46Q86W74 232 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 SFRP1Q8N474 314 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 OR10A6Q8NH74 314 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 TSPEARQ8WU66 669 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 CGREF1Q99674 301 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 ZCCHC2Q9C0B9 1178 aaKnown RBP15.41■□□□□ 0.06
RFX1-201ENST00000254325 NANOGQ9H9S0 305 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 SPASTQ9UBP0 616 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 DYRK1BQ9Y463 629 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 GPR45Q9Y5Y3 372 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 E2F3O00716 465 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 MAP3K13O43283 966 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 RPS3P23396 243 aaKnown RBP eCLIP15.41■□□□□ 0.06
RFX1-201ENST00000254325 SLC6A2P23975 617 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 HLA-FP30511 346 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 DGKGP49619 791 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 PPIGQ13427 754 aaKnown RBP eCLIP15.41■□□□□ 0.06
RFX1-201ENST00000254325 NAE1Q13564 534 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 KRT33BQ14525 404 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 UGT3A2Q3SY77 523 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 RAET1GQ6H3X3 334 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 OGFOD2Q6N063 350 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 BRAT1Q6PJG6 821 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 LKAAEAR1Q8TD35 194 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 ATL1Q8WXF7 558 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 MYLIPQ8WY64 445 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 MRPS26Q9BYN8 205 aaKnown RBP15.41■□□□□ 0.06
RFX1-201ENST00000254325 LINC00597Q9H2U6 94 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 SPHK2Q9NRA0 654 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 TBX21Q9UL17 535 aa15.41■□□□□ 0.06
RFX1-201ENST00000254325 QSOX1O00391 747 aa15.4■□□□□ 0.06
RFX1-201ENST00000254325 IFRD1O00458 451 aaPredicted RBP15.4■□□□□ 0.06
RFX1-201ENST00000254325 MANBAO00462 879 aa15.4■□□□□ 0.06
RFX1-201ENST00000254325 COX7A2P14406 83 aa15.4■□□□□ 0.06
RFX1-201ENST00000254325 PCBP2Q15366 365 aaKnown RBP eCLIP15.4■□□□□ 0.061e-6■■□□□ 11.4
RFX1-201ENST00000254325 HIST2H2ACQ16777 129 aaPredicted RBP15.4■□□□□ 0.06
RFX1-201ENST00000254325 HIST2H2AA3Q6FI13 130 aa15.4■□□□□ 0.06
RFX1-201ENST00000254325 TCEAL4Q96EI5 215 aa15.4■□□□□ 0.06
RFX1-201ENST00000254325 ZNF641Q96N77 438 aaPredicted RBP15.4■□□□□ 0.06
RFX1-201ENST00000254325 CCDC90BQ9GZT6 254 aa15.4■□□□□ 0.06
RFX1-201ENST00000254325 PNPLA3Q9NST1 481 aa15.4■□□□□ 0.06
RFX1-201ENST00000254325 DUS2Q9NX74 493 aaKnown RBP15.4■□□□□ 0.06
RFX1-201ENST00000254325 SH3BP4Q9P0V3 963 aa15.4■□□□□ 0.06
RFX1-201ENST00000254325 A0A1B0GTL3 188 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms