RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 TFGQ92734 400 aaPredicted RBP12.44□□□□□ -0.42
VPREB3-201ENST00000248948 ART4Q93070 314 aa12.44□□□□□ -0.42
VPREB3-201ENST00000248948 TFB2MQ9H5Q4 396 aaKnown RBP12.44□□□□□ -0.42
VPREB3-201ENST00000248948 FBXO8Q9NRD0 319 aa12.44□□□□□ -0.42
VPREB3-201ENST00000248948 INTS10Q9NVR2 710 aaKnown RBP12.44□□□□□ -0.42
VPREB3-201ENST00000248948 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.44□□□□□ -0.42
VPREB3-201ENST00000248948 LHX6Q9UPM6 363 aa12.44□□□□□ -0.42
VPREB3-201ENST00000248948 PCDHB11Q9Y5F2 797 aa12.44□□□□□ -0.42
VPREB3-201ENST00000248948 RPS6KL1Q9Y6S9 549 aa12.44□□□□□ -0.42
VPREB3-201ENST00000248948 SNRNP200O75643 2136 aaKnown RBP12.44□□□□□ -0.42
VPREB3-201ENST00000248948 ZCWPW2A0A1B0GU75 182 aa12.43□□□□□ -0.42
VPREB3-201ENST00000248948 A8MU76 341 aa12.43□□□□□ -0.42
VPREB3-201ENST00000248948 NDC80O14777 642 aa12.43□□□□□ -0.42
VPREB3-201ENST00000248948 KPNA5O15131 536 aa12.43□□□□□ -0.42
VPREB3-201ENST00000248948 KLK10O43240 276 aa12.43□□□□□ -0.42
VPREB3-201ENST00000248948 KDM1AO60341 852 aa12.43□□□□□ -0.42
VPREB3-201ENST00000248948 RASSF9O75901 435 aa12.43□□□□□ -0.42
VPREB3-201ENST00000248948 ESR1P03372 595 aa12.43□□□□□ -0.42
VPREB3-201ENST00000248948 PGAM1P18669 254 aa12.43□□□□□ -0.42
VPREB3-201ENST00000248948 ITPKBP27987 946 aa12.43□□□□□ -0.42
VPREB3-201ENST00000248948 ACADLP28330 430 aa12.43□□□□□ -0.42
VPREB3-201ENST00000248948 CCR7P32248 378 aa12.43□□□□□ -0.42
VPREB3-201ENST00000248948 MORF4L2Q15014 288 aa12.43□□□□□ -0.42
VPREB3-201ENST00000248948 ANKRD20A4Q4UJ75 823 aa12.43□□□□□ -0.42
VPREB3-201ENST00000248948 DNAJC21Q5F1R6 531 aaKnown RBP12.43□□□□□ -0.42
VPREB3-201ENST00000248948 DNTTIP2Q5QJE6 756 aaKnown RBP12.43□□□□□ -0.42
VPREB3-201ENST00000248948 IZUMO3Q5VZ72 239 aa12.43□□□□□ -0.42
VPREB3-201ENST00000248948 PTRHD1Q6GMV3 140 aaKnown RBP12.43□□□□□ -0.42
VPREB3-201ENST00000248948 CES3Q6UWW8 571 aa12.43□□□□□ -0.42
VPREB3-201ENST00000248948 CEACAM20Q6UY09 585 aa12.43□□□□□ -0.42
VPREB3-201ENST00000248948 LDB1Q86U70 411 aaPredicted RBP12.43□□□□□ -0.42
VPREB3-201ENST00000248948 DTX1Q86Y01 620 aa12.43□□□□□ -0.42
VPREB3-201ENST00000248948 CILP2Q8IUL8 1156 aa12.43□□□□□ -0.42
VPREB3-201ENST00000248948 KLHL7Q8IXQ5 586 aa12.43□□□□□ -0.42
VPREB3-201ENST00000248948 OR5K2Q8NHB8 316 aa12.43□□□□□ -0.42
VPREB3-201ENST00000248948 LKAAEAR1Q8TD35 194 aa12.43□□□□□ -0.42
VPREB3-201ENST00000248948 HNRNPLLQ8WVV9 542 aaKnown RBP12.43□□□□□ -0.42
VPREB3-201ENST00000248948 STAMBPL1Q96FJ0 436 aa12.43□□□□□ -0.42
VPREB3-201ENST00000248948 SLC41A2Q96JW4 573 aa12.43□□□□□ -0.42
VPREB3-201ENST00000248948 FERD3LQ96RJ6 166 aa12.43□□□□□ -0.42
VPREB3-201ENST00000248948 NAT9Q9BTE0 207 aa12.43□□□□□ -0.42
VPREB3-201ENST00000248948 HGH1Q9BTY7 390 aa12.43□□□□□ -0.42
VPREB3-201ENST00000248948 TRIT1Q9H3H1 467 aaKnown RBP12.43□□□□□ -0.42
VPREB3-201ENST00000248948 OCIAD1Q9NX40 245 aa12.43□□□□□ -0.42
VPREB3-201ENST00000248948 SLC39A1Q9NY26 324 aa12.43□□□□□ -0.42
VPREB3-201ENST00000248948 POMT2Q9UKY4 750 aa12.43□□□□□ -0.42
VPREB3-201ENST00000248948 IGSF10Q6WRI0 2623 aa12.43□□□□□ -0.42
VPREB3-201ENST00000248948 UBA6A0AVT1 1052 aaPredicted RBP12.42□□□□□ -0.42
VPREB3-201ENST00000248948 BHMG1C9JSJ3 638 aaPredicted RBP12.42□□□□□ -0.42
VPREB3-201ENST00000248948 AGRPO00253 132 aa12.42□□□□□ -0.42
VPREB3-201ENST00000248948 GPC4O75487 556 aa12.42□□□□□ -0.42
VPREB3-201ENST00000248948 TTC4O95801 387 aa12.42□□□□□ -0.42
VPREB3-201ENST00000248948 RPN2P04844 631 aa12.42□□□□□ -0.42
VPREB3-201ENST00000248948 NELFEP18615 380 aaKnown RBP12.42□□□□□ -0.42
VPREB3-201ENST00000248948 IVDP26440 423 aa12.42□□□□□ -0.42
VPREB3-201ENST00000248948 AOAHP28039 575 aa12.42□□□□□ -0.42
VPREB3-201ENST00000248948 ATP5DP30049 168 aa12.42□□□□□ -0.42
VPREB3-201ENST00000248948 SHMT2P34897 504 aa12.42□□□□□ -0.42
VPREB3-201ENST00000248948 EIF3BP55884 814 aaKnown RBP12.42□□□□□ -0.42
VPREB3-201ENST00000248948 PPP1CAP62136 330 aa12.42□□□□□ -0.42
VPREB3-201ENST00000248948 PRKAA1Q13131 559 aa12.42□□□□□ -0.42
VPREB3-201ENST00000248948 IL11RAQ14626 422 aa12.42□□□□□ -0.42
VPREB3-201ENST00000248948 LONRF1Q17RB8 773 aa12.42□□□□□ -0.42
VPREB3-201ENST00000248948 CACHD1Q5VU97 1274 aa12.42□□□□□ -0.42
VPREB3-201ENST00000248948 ANKS6Q68DC2 871 aa12.42□□□□□ -0.42
VPREB3-201ENST00000248948 ZNF470Q6ECI4 717 aa12.42□□□□□ -0.42
VPREB3-201ENST00000248948 NEPROQ6NW34 567 aa12.42□□□□□ -0.42
VPREB3-201ENST00000248948 ARMC6Q6NXE6 501 aa12.42□□□□□ -0.42
VPREB3-201ENST00000248948 UNC5DQ6UXZ4 953 aa12.42□□□□□ -0.42
VPREB3-201ENST00000248948 FAM92BQ6ZTR7 304 aa12.42□□□□□ -0.42
VPREB3-201ENST00000248948 TBC1D21Q8IYX1 336 aa12.42□□□□□ -0.42
VPREB3-201ENST00000248948 AGGF1Q8N302 714 aaeCLIP12.42□□□□□ -0.42
VPREB3-201ENST00000248948 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.42□□□□□ -0.42
VPREB3-201ENST00000248948 OR52E1Q8NGJ3 308 aa12.42□□□□□ -0.42
VPREB3-201ENST00000248948 CALML6Q8TD86 181 aa12.42□□□□□ -0.42
VPREB3-201ENST00000248948 LCN9Q8WX39 176 aa12.42□□□□□ -0.42
VPREB3-201ENST00000248948 JPH3Q8WXH2 748 aaPredicted RBP12.42□□□□□ -0.42
VPREB3-201ENST00000248948 PMEPA1Q969W9 287 aa12.42□□□□□ -0.42
VPREB3-201ENST00000248948 NAF1Q96HR8 494 aaKnown RBP12.42□□□□□ -0.42
VPREB3-201ENST00000248948 SIGLEC10Q96LC7 697 aa12.42□□□□□ -0.42
VPREB3-201ENST00000248948 FAM167BQ9BTA0 163 aa12.42□□□□□ -0.42
VPREB3-201ENST00000248948 HRASLS2Q9NWW9 162 aa12.42□□□□□ -0.42
VPREB3-201ENST00000248948 POLG2Q9UHN1 485 aa12.42□□□□□ -0.42
VPREB3-201ENST00000248948 CDYLQ9Y232 598 aa12.42□□□□□ -0.42
VPREB3-201ENST00000248948 ASF1AQ9Y294 204 aa12.42□□□□□ -0.42
VPREB3-201ENST00000248948 B3GALT1Q9Y5Z6 326 aa12.42□□□□□ -0.42
VPREB3-201ENST00000248948 MAD1L1Q9Y6D9 718 aa12.42□□□□□ -0.42
VPREB3-201ENST00000248948 OR6C74A6NCV1 312 aa12.41□□□□□ -0.42
VPREB3-201ENST00000248948 GOLGA8KD6RF30 607 aa12.41□□□□□ -0.42
VPREB3-201ENST00000248948 GOLGA8TH3BQL2 631 aa12.41□□□□□ -0.42
VPREB3-201ENST00000248948 POLR1CO15160 346 aaPredicted RBP12.41□□□□□ -0.42
VPREB3-201ENST00000248948 TTI1O43156 1089 aa12.41□□□□□ -0.42
VPREB3-201ENST00000248948 SLCO2B1O94956 709 aa12.41□□□□□ -0.42
VPREB3-201ENST00000248948 SEC31AO94979 1220 aaKnown RBP12.41□□□□□ -0.42
VPREB3-201ENST00000248948 CASQ1P31415 396 aa12.41□□□□□ -0.42
VPREB3-201ENST00000248948 ATP1A2P50993 1020 aa12.41□□□□□ -0.42
VPREB3-201ENST00000248948 DHX9Q08211 1270 aaKnown RBP12.41□□□□□ -0.42
VPREB3-201ENST00000248948 HSPA14Q0VDF9 509 aa12.41□□□□□ -0.42
VPREB3-201ENST00000248948 THOC5Q13769 683 aaKnown RBP12.41□□□□□ -0.42
VPREB3-201ENST00000248948 MAP7Q14244 749 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms