RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 DERL2Q9GZP9 239 aa20.22■□□□□ 0.83
SNX3-201ENST00000230085 FANCEQ9HB96 536 aa20.22■□□□□ 0.83
SNX3-201ENST00000230085 TLR8Q9NR97 1041 aaKnown RBP20.22■□□□□ 0.83
SNX3-201ENST00000230085 ATAD3AQ9NVI7 634 aa20.22■□□□□ 0.83
SNX3-201ENST00000230085 TMED5Q9Y3A6 229 aa20.22■□□□□ 0.83
SNX3-201ENST00000230085 DENND4AQ7Z401 1863 aa20.22■□□□□ 0.83
SNX3-201ENST00000230085 LOC285095A0A1B0GVY8 99 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 C2orf78A6NCI8 922 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 TPST1O60507 370 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 CLIC3O95833 236 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 ALOX5P09917 674 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 ZDHHC11BP0C7U3 371 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 RAP2AP10114 183 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 THRBP10828 461 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 HALP42357 657 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 NEDD8Q15843 81 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 BCL2A1Q16548 175 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 TYSND1Q2T9J0 566 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 ANKRD13BQ86YJ7 626 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 PARP8Q8N3A8 854 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 PDZD8Q8NEN9 1154 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 S100ZQ8WXG8 99 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 OVCA2Q8WZ82 227 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 EDEM1Q92611 657 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 MUL1Q969V5 352 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 ZSWIM3Q96MP5 696 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 IL1RL2Q9HB29 575 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 CORINQ9Y5Q5 1042 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 A0A0C4DFX4 3053 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 CLDN25C9JDP6 229 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 LDB2O43679 373 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 PAGE1O75459 146 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 CD9P21926 228 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 CCR1P32246 355 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 PPP3CCP48454 512 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 ERVK-8P63133 956 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 CLCQ05315 142 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 ZNF549Q6P9A3 640 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 IGFN1Q86VF2 1251 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 NPAS3Q8IXF0 933 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 SPARTQ8N0X7 666 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 MRPS31Q92665 395 aaKnown RBP20.21■□□□□ 0.83
SNX3-201ENST00000230085 ZNF566Q969W8 418 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 NSMCE2Q96MF7 247 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 MUS81Q96NY9 551 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 MYADMQ96S97 322 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 SLC46A2Q9BY10 475 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 ENPP5Q9UJA9 477 aa20.21■□□□□ 0.83
SNX3-201ENST00000230085 SLC22A3O75751 556 aa20.2■□□□□ 0.82
SNX3-201ENST00000230085 EIF2S1P05198 315 aaKnown RBP20.2■□□□□ 0.82
SNX3-201ENST00000230085 MMP2P08253 660 aa20.2■□□□□ 0.82
SNX3-201ENST00000230085 UROSP10746 265 aa20.2■□□□□ 0.82
SNX3-201ENST00000230085 MTHFD1P11586 935 aaKnown RBP20.2■□□□□ 0.82
SNX3-201ENST00000230085 PSMA3P25788 255 aa20.2■□□□□ 0.82
SNX3-201ENST00000230085 CDH13P55290 713 aa20.2■□□□□ 0.82
SNX3-201ENST00000230085 FOXA1P55317 472 aa20.2■□□□□ 0.82
SNX3-201ENST00000230085 IL18R1Q13478 541 aa20.2■□□□□ 0.82
SNX3-201ENST00000230085 OR4D1Q15615 310 aa20.2■□□□□ 0.82
SNX3-201ENST00000230085 AAK1Q2M2I8 961 aa20.2■□□□□ 0.82
SNX3-201ENST00000230085 PUS10Q3MIT2 529 aaKnown RBP20.2■□□□□ 0.82
SNX3-201ENST00000230085 TXNDC11Q6PKC3 985 aa20.2■□□□□ 0.82
SNX3-201ENST00000230085 C8orf59Q8N0T1 100 aaPredicted RBP20.2■□□□□ 0.82
SNX3-201ENST00000230085 SVOPLQ8N434 492 aa20.2■□□□□ 0.82
SNX3-201ENST00000230085 ABHD11Q8NFV4 315 aa20.2■□□□□ 0.82
SNX3-201ENST00000230085 STAG3L4Q8TBR4 150 aa20.2■□□□□ 0.82
SNX3-201ENST00000230085 SLC22A12Q96S37 553 aa20.2■□□□□ 0.82
SNX3-201ENST00000230085 LHPPQ9H008 270 aa20.2■□□□□ 0.82
SNX3-201ENST00000230085 SYTL2Q9HCH5 934 aa20.2■□□□□ 0.82
SNX3-201ENST00000230085 HMG20AQ9NP66 347 aa20.2■□□□□ 0.82
SNX3-201ENST00000230085 AKIP1Q9NQ31 210 aa20.2■□□□□ 0.82
SNX3-201ENST00000230085 HEBP1Q9NRV9 189 aa20.2■□□□□ 0.82
SNX3-201ENST00000230085 ABCC13Q9NSE7 274 aa20.2■□□□□ 0.82
SNX3-201ENST00000230085 NUDT5Q9UKK9 219 aa20.2■□□□□ 0.82
SNX3-201ENST00000230085 CCDC154A6NI56 674 aa20.19■□□□□ 0.82
SNX3-201ENST00000230085 FOXD2O60548 495 aaPredicted RBP20.19■□□□□ 0.82
SNX3-201ENST00000230085 MT-CO1P00395 513 aa20.19■□□□□ 0.82
SNX3-201ENST00000230085 EPOP01588 193 aa20.19■□□□□ 0.82
SNX3-201ENST00000230085 SLC2A3P11169 496 aa20.19■□□□□ 0.82
SNX3-201ENST00000230085 CHRM3P20309 590 aa20.19■□□□□ 0.82
SNX3-201ENST00000230085 JAK1P23458 1154 aa20.19■□□□□ 0.82
SNX3-201ENST00000230085 CCR3P51677 355 aa20.19■□□□□ 0.82
SNX3-201ENST00000230085 POLR2JP52435 117 aaKnown RBP20.19■□□□□ 0.82
SNX3-201ENST00000230085 YBX1P67809 324 aaKnown RBP20.19■□□□□ 0.82
SNX3-201ENST00000230085 RABL3Q5HYI8 236 aa20.19■□□□□ 0.82
SNX3-201ENST00000230085 PAGE3Q5JUK9 113 aa20.19■□□□□ 0.82
SNX3-201ENST00000230085 ANKS6Q68DC2 871 aa20.19■□□□□ 0.82
SNX3-201ENST00000230085 MRNIPQ6NTE8 343 aa20.19■□□□□ 0.82
SNX3-201ENST00000230085 GALNT18Q6P9A2 607 aa20.19■□□□□ 0.82
SNX3-201ENST00000230085 TBPL2Q6SJ96 375 aa20.19■□□□□ 0.82
SNX3-201ENST00000230085 ZFAND4Q86XD8 727 aa20.19■□□□□ 0.82
SNX3-201ENST00000230085 ST13P5Q8NFI4 369 aaPredicted RBP20.19■□□□□ 0.82
SNX3-201ENST00000230085 FBLIM1Q8WUP2 373 aa20.19■□□□□ 0.82
SNX3-201ENST00000230085 RNF34Q969K3 372 aa20.19■□□□□ 0.82
SNX3-201ENST00000230085 SH3YL1Q96HL8 342 aaPredicted RBP20.19■□□□□ 0.82
SNX3-201ENST00000230085 CSF3RQ99062 836 aa20.19■□□□□ 0.82
SNX3-201ENST00000230085 AARSD1Q9BTE6 412 aaKnown RBP20.19■□□□□ 0.82
SNX3-201ENST00000230085 PHF7Q9BWX1 381 aaPredicted RBP20.19■□□□□ 0.82
SNX3-201ENST00000230085 RNF38Q9H0F5 515 aa20.19■□□□□ 0.82
SNX3-201ENST00000230085 CCSER2Q9H7U1 834 aa20.19■□□□□ 0.82
SNX3-201ENST00000230085 GORASP2Q9H8Y8 452 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms