RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 PJA1Q8NG27 643 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 OR2T29Q8NH02 315 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 SEMA3GQ9NS98 782 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 SMOXQ9NWM0 555 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 GULP1Q9UBP9 304 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 PLCL2Q9UPR0 1127 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 NCKAP1Q9Y2A7 1128 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 TRPV2Q9Y5S1 764 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 ZNF701M0R085 212 aaPredicted RBP13.59□□□□□ -0.23
HCFC2-201ENST00000229330 PLOD2O00469 737 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 REM1O75628 298 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 STK16O75716 305 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 CHRNA1P02708 482 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 ITGB1P05556 798 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 PCSK2P16519 638 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 VARSP26640 1264 aaKnown RBP13.59□□□□□ -0.23
HCFC2-201ENST00000229330 SERPINA4P29622 427 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 RABL3Q5HYI8 236 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 CCBE1Q6UXH8 406 aaPredicted RBP13.59□□□□□ -0.23
HCFC2-201ENST00000229330 LSM14AQ8ND56 463 aaKnown RBP13.59□□□□□ -0.23
HCFC2-201ENST00000229330 FBXO27Q8NI29 283 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 TNFAIP8L1Q8WVP5 186 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 SLC25A51Q9H1U9 297 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 SMURF2Q9HAU4 748 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 USP29Q9HBJ7 922 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 PAK1IP1Q9NWT1 392 aaPredicted RBP13.59□□□□□ -0.23
HCFC2-201ENST00000229330 PCDHB1Q9Y5F3 818 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 ALDH2P05091 517 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 CKMP06732 381 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 F7P08709 466 aaPredicted RBP13.59□□□□□ -0.23
HCFC2-201ENST00000229330 CYP3A5P20815 502 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 IVDP26440 423 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 NDST2P52849 883 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 SIX1Q15475 284 aaPredicted RBP13.59□□□□□ -0.23
HCFC2-201ENST00000229330 PRAMEF19Q5SWL8 479 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 GARNL3Q5VVW2 1013 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 PLPPR4Q7Z2D5 763 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 ZC3HC1Q86WB0 502 aaKnown RBP13.59□□□□□ -0.23
HCFC2-201ENST00000229330 ZNF384Q8TF68 577 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 COL21A1Q96P44 957 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 KCNC2Q96PR1 638 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 ZSCAN5AQ9BUG6 496 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 TFB2MQ9H5Q4 396 aaKnown RBP13.59□□□□□ -0.23
HCFC2-201ENST00000229330 SOX17Q9H6I2 414 aaPredicted RBP13.59□□□□□ -0.23
HCFC2-201ENST00000229330 NRCAMQ92823 1304 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 KRBA1A5PL33 1030 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 IL7P13232 177 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 MYF6P23409 242 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 GTF2E2P29084 291 aaKnown RBP13.59□□□□□ -0.23
HCFC2-201ENST00000229330 CSTF1Q05048 431 aaKnown RBP13.59□□□□□ -0.23
HCFC2-201ENST00000229330 TEAD4Q15561 434 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 HJURPQ8NCD3 748 aaPredicted RBP13.59□□□□□ -0.23
HCFC2-201ENST00000229330 GAB3Q8WWW8 586 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 EXOC2Q96KP1 924 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 GPR22Q99680 433 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 GTPBP2Q9BX10 602 aaKnown RBP13.59□□□□□ -0.23
HCFC2-201ENST00000229330 FAM124BQ9H5Z6 455 aaPredicted RBP13.59□□□□□ -0.23
HCFC2-201ENST00000229330 MATN3O15232 486 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 GJB1P08034 283 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 HOXC6P09630 235 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 CDH4P55283 916 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 FAM182AQ5T1J6 154 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 PDE12Q6L8Q7 609 aaKnown RBP13.59□□□□□ -0.23
HCFC2-201ENST00000229330 BORAQ6PGQ7 559 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 TRIM48Q8IWZ4 208 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 TOP6BLQ8N6T0 577 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 OR10G2Q8NGC3 310 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 PPP1R13LQ8WUF5 828 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 KANSL3Q9P2N6 904 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 CEPT1Q9Y6K0 416 aa13.59□□□□□ -0.23
HCFC2-201ENST00000229330 SOCS2O14508 198 aa13.58□□□□□ -0.24
HCFC2-201ENST00000229330 ASPAP45381 313 aa13.58□□□□□ -0.24
HCFC2-201ENST00000229330 ATP4BP51164 291 aa13.58□□□□□ -0.24
HCFC2-201ENST00000229330 IDNKQ5T6J7 187 aa13.58□□□□□ -0.24
HCFC2-201ENST00000229330 UBE2R2Q712K3 238 aaPredicted RBP13.58□□□□□ -0.24
HCFC2-201ENST00000229330 CEP295NLQ96MC4 621 aa13.58□□□□□ -0.24
HCFC2-201ENST00000229330 TMEM74Q96NL1 305 aa13.58□□□□□ -0.24
HCFC2-201ENST00000229330 TBC1D24Q9ULP9 559 aa13.58□□□□□ -0.24
HCFC2-201ENST00000229330 DERAQ9Y315 318 aa13.58□□□□□ -0.24
HCFC2-201ENST00000229330 GRIP1Q9Y3R0 1128 aa13.58□□□□□ -0.24
HCFC2-201ENST00000229330 C10orf71Q711Q0 1435 aa13.58□□□□□ -0.24
HCFC2-201ENST00000229330 TCAF2A6NFQ2 919 aa13.58□□□□□ -0.24
HCFC2-201ENST00000229330 GADD45GO95257 159 aa13.58□□□□□ -0.24
HCFC2-201ENST00000229330 GOT2P00505 430 aaKnown RBP13.58□□□□□ -0.24
HCFC2-201ENST00000229330 PEPDP12955 493 aa13.58□□□□□ -0.24
HCFC2-201ENST00000229330 RPS3P23396 243 aaKnown RBP eCLIP13.58□□□□□ -0.24
HCFC2-201ENST00000229330 RPS14P62263 151 aaKnown RBP13.58□□□□□ -0.24
HCFC2-201ENST00000229330 KLHL22Q53GT1 634 aa13.58□□□□□ -0.24
HCFC2-201ENST00000229330 DEFB128Q7Z7B8 93 aa13.58□□□□□ -0.24
HCFC2-201ENST00000229330 AMIGO1Q86WK6 493 aa13.58□□□□□ -0.24
HCFC2-201ENST00000229330 ART5Q96L15 291 aa13.58□□□□□ -0.24
HCFC2-201ENST00000229330 NTPCRQ9BSD7 190 aaKnown RBP13.58□□□□□ -0.24
HCFC2-201ENST00000229330 SEC14L3Q9UDX4 400 aa13.58□□□□□ -0.24
HCFC2-201ENST00000229330 AGO1Q9UL18 857 aaKnown RBP13.58□□□□□ -0.24
HCFC2-201ENST00000229330 PCDHGB3Q9Y5G1 929 aa13.58□□□□□ -0.24
HCFC2-201ENST00000229330 SPIN1Q9Y657 262 aaPredicted RBP13.58□□□□□ -0.24
HCFC2-201ENST00000229330 H3BMQ9 156 aa13.58□□□□□ -0.24
HCFC2-201ENST00000229330 SCAMP3O14828 347 aaKnown RBP13.58□□□□□ -0.24
HCFC2-201ENST00000229330 CYP2A6P11509 494 aaPredicted RBP13.58□□□□□ -0.24
HCFC2-201ENST00000229330 CES1P23141 567 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms