RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 DNAJC14Q6Y2X3 702 aaPredicted RBP16.96■□□□□ 0.31
USB1-201ENST00000219281 TRIM74Q86UV6 250 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 TRIM73Q86UV7 250 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 DENND1CQ8IV53 801 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 TTC30BQ8N4P2 665 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 NAT16Q8N8M0 369 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 HDAC2Q92769 488 aaKnown RBP16.96■□□□□ 0.31
USB1-201ENST00000219281 CCDC97Q96F63 343 aaPredicted RBP16.96■□□□□ 0.31
USB1-201ENST00000219281 CCDC115Q96NT0 180 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 CASD1Q96PB1 797 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 ZBTB18Q99592 522 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 BEGAINQ9BUH8 593 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 OSBPL10Q9BXB5 764 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 P2RY12Q9H244 342 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 DHRS7Q9Y394 339 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 VWA8A3KMH1 1905 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 TET1Q8NFU7 2136 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 GREB1Q4ZG55 1949 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 FFAR3O14843 346 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 GPR42O15529 346 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 FFAR2O15552 330 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 OTCP00480 354 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 ZDHHC11BP0C7U3 371 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 OCM2P0CE71 109 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 OCMP0CE72 109 aaPredicted RBP16.96■□□□□ 0.31
USB1-201ENST00000219281 ITGB6P18564 788 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 DUSP4Q13115 394 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 CTU2Q2VPK5 515 aaKnown RBP16.96■□□□□ 0.31
USB1-201ENST00000219281 FAM174BQ3ZCQ3 159 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 GTF2IRD2BQ6EKJ0 949 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 SBSNQ6UWP8 590 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 LINGO4Q6UY18 593 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 GTF2IRD2Q86UP8 949 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 CENPSQ8N2Z9 138 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 CHDHQ8NE62 594 aaPredicted RBP16.96■□□□□ 0.31
USB1-201ENST00000219281 ZNF548Q8NEK5 533 aaPredicted RBP16.96■□□□□ 0.31
USB1-201ENST00000219281 GTF2H4Q92759 462 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 NSUN3Q9H649 340 aaKnown RBP16.96■□□□□ 0.31
USB1-201ENST00000219281 GPN2Q9H9Y4 310 aaPredicted RBP16.96■□□□□ 0.31
USB1-201ENST00000219281 SH3GLB1Q9Y371 365 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 CCL27Q9Y4X3 112 aa16.96■□□□□ 0.31
USB1-201ENST00000219281 C1orf232A0A0U1RR37 186 aa16.95■□□□□ 0.3
USB1-201ENST00000219281 C16orf96A6NNT2 1141 aa16.95■□□□□ 0.3
USB1-201ENST00000219281 MLLT10P55197 1068 aa16.95■□□□□ 0.3
USB1-201ENST00000219281 ATP1A4Q13733 1029 aa16.95■□□□□ 0.3
USB1-201ENST00000219281 MAPKAPK3Q16644 382 aa16.95■□□□□ 0.3
USB1-201ENST00000219281 SPESP1Q6UW49 350 aa16.95■□□□□ 0.3
USB1-201ENST00000219281 C16orf59Q7L2K0 433 aa16.95■□□□□ 0.3
USB1-201ENST00000219281 ADAMTSL2Q86TH1 951 aa16.95■□□□□ 0.3
USB1-201ENST00000219281 KLHL23Q8NBE8 558 aa16.95■□□□□ 0.3
USB1-201ENST00000219281 FAM162AQ96A26 154 aa16.95■□□□□ 0.3
USB1-201ENST00000219281 PPP3R2Q96LZ3 170 aa16.95■□□□□ 0.3
USB1-201ENST00000219281 RDH12Q96NR8 316 aa16.95■□□□□ 0.3
USB1-201ENST00000219281 NACA2Q9H009 215 aa16.95■□□□□ 0.3
USB1-201ENST00000219281 ACTR8Q9H981 624 aa16.95■□□□□ 0.3
USB1-201ENST00000219281 FARSBQ9NSD9 589 aaKnown RBP16.95■□□□□ 0.3
USB1-201ENST00000219281 MARCH5Q9NX47 278 aa16.95■□□□□ 0.3
USB1-201ENST00000219281 ELOVL2Q9NXB9 296 aa16.95■□□□□ 0.3
USB1-201ENST00000219281 WARS2Q9UGM6 360 aaKnown RBP16.95■□□□□ 0.3
USB1-201ENST00000219281 PDE10AQ9Y233 779 aa16.95■□□□□ 0.3
USB1-201ENST00000219281 EIF3LQ9Y262 564 aaKnown RBP16.95■□□□□ 0.3
USB1-201ENST00000219281 COQ6Q9Y2Z9 468 aa16.95■□□□□ 0.3
USB1-201ENST00000219281 SLC30A1Q9Y6M5 507 aa16.95■□□□□ 0.3
USB1-201ENST00000219281 OR6C75A6NL08 312 aa16.95■□□□□ 0.3
USB1-201ENST00000219281 TAPBPO15533 448 aa16.95■□□□□ 0.3
USB1-201ENST00000219281 PRKD3O94806 890 aa16.95■□□□□ 0.3
USB1-201ENST00000219281 HTR1AP08908 422 aa16.95■□□□□ 0.3
USB1-201ENST00000219281 COL6A1P12109 1028 aa16.95■□□□□ 0.3
USB1-201ENST00000219281 AGXTP21549 392 aa16.95■□□□□ 0.3
USB1-201ENST00000219281 PRKACGP22612 351 aa16.95■□□□□ 0.3
USB1-201ENST00000219281 NR4A1P22736 598 aa16.95■□□□□ 0.3
USB1-201ENST00000219281 GGT5P36269 586 aa16.95■□□□□ 0.3
USB1-201ENST00000219281 SLC11A2P49281 568 aa16.95■□□□□ 0.3
USB1-201ENST00000219281 CCR3P51677 355 aa16.95■□□□□ 0.3
USB1-201ENST00000219281 KCNAB2Q13303 367 aa16.95■□□□□ 0.3
USB1-201ENST00000219281 NR1D2Q14995 579 aa16.95■□□□□ 0.3
USB1-201ENST00000219281 REM2Q8IYK8 340 aaPredicted RBP16.95■□□□□ 0.3
USB1-201ENST00000219281 PDLIM5Q96HC4 596 aaKnown RBP16.95■□□□□ 0.3
USB1-201ENST00000219281 SPATA17Q96L03 361 aa16.95■□□□□ 0.3
USB1-201ENST00000219281 CCDC138Q96M89 665 aa16.95■□□□□ 0.3
USB1-201ENST00000219281 FEM1AQ9BSK4 669 aa16.95■□□□□ 0.3
USB1-201ENST00000219281 DGCR6LQ9BY27 220 aa16.95■□□□□ 0.3
USB1-201ENST00000219281 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.95■□□□□ 0.3
USB1-201ENST00000219281 ZFP14Q9HCL3 533 aa16.95■□□□□ 0.3
USB1-201ENST00000219281 DNMT3LQ9UJW3 386 aa16.95■□□□□ 0.3
USB1-201ENST00000219281 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.94■□□□□ 0.3
USB1-201ENST00000219281 ELOVL7A1L3X0 281 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 K7EPI3 171 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 CXCR6O00574 342 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 RAD51BO15315 384 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 CLPXO76031 633 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 GJB5O95377 273 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 PRAMEF12O95522 483 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 AKT1P31749 480 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 ATP5C1P36542 298 aaKnown RBP16.94■□□□□ 0.3
USB1-201ENST00000219281 GDF5P43026 501 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 CD97P48960 835 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 PPP2R2BQ00005 443 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 HMGCS1Q01581 520 aa16.94■□□□□ 0.3
USB1-201ENST00000219281 CD47Q08722 323 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms