RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Susd6Q8BGE4 302 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Ostm1Q8BGT0 338 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Nars2Q8BGV0 477 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Oscp1Q8BHW2 379 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 MiosQ8VE19 875 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Mtfr1Q99MB2 328 aa15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Efhd2Q9D8Y0 240 aaKnown RBP15.32■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gm13276A0A087WR18 182 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Olfr1160A2AVT0 319 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 EnpepP16406 945 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Slc7a2P18581 657 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Nckap1P28660 1128 aaKnown RBP15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Ckmt1P30275 418 aaKnown RBP15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Fam189a2Q4FZH1 290 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Zdhhc20Q5Y5T1 380 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Serpina12Q7TMF5 413 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gpr62Q80UC6 358 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Snx8Q8CFD4 459 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Tnfaip8l1Q8K288 186 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Slamf1Q9QUM4 343 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 DnpepQ9Z2W0 473 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Itga8A2ARA8 1062 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Zfr2E9Q5M4 874 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Tsga10ipF7A1F0 157 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 BgnP28653 369 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 AcadmP45952 421 aaKnown RBP15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Dnajc11Q5U458 559 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Ugt2b34Q8K154 532 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Q9CQF4 240 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Prkar1aQ9DBC7 381 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gtf2h2Q9JIB4 396 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Galk1Q9R0N0 392 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Mup18A2BIM8 181 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Vmn2r111K7N674 857 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Mup11P04938 181 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 PnpP23492 289 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Idh2P54071 452 aaKnown RBP15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Kcnc2Q14B80 642 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Mrpl10Q3TBW2 262 aaKnown RBP15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gm21320Q4FZE8 181 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Brsk2Q69Z98 735 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Rps9Q6ZWN5 194 aaKnown RBP15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Fndc11Q80WB0 326 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Luzp2Q8BGY3 345 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 ClmpQ8R373 373 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Mcoln3Q8R4F0 553 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Pex6Q99LC9 981 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Ndst3Q9EQH7 873 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Il17rbQ9JIP3 499 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Cyp4a14O35728 507 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 St3gal1P54751 337 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Cd300lgQ1ERP8 331 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Dnajc15Q78YY6 149 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Tas2r106Q7M724 308 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Clec2eQ80XD9 204 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Pi4k2bQ8CBQ5 469 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Olfr722Q8VFC8 308 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Olfr1361Q8VFH0 317 aa15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Rbm47Q91WT8 590 aaKnown RBP15.31■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Zscan4eA0A1B0GRE8 505 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 AcrP23578 436 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 MtpnP62774 118 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Icam5Q60625 917 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Adam39Q7M762 756 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Tigd3Q7TM95 470 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Efemp1Q8BPB5 493 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Trmt2bQ8BQJ6 493 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 D8Ertd738eQ8R1F0 94 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Olfr541Q8VGM0 312 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 NbnQ9R207 751 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Fkbp1bQ9Z2I2 108 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Cdc6O89033 562 aaKnown RBP15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Cd3gP11942 182 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Stat6P52633 837 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Ap2m1P84091 435 aaKnown RBP15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Kctd13Q8BGV7 329 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Lurap1lQ8K2P1 221 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Olfr1311Q8VET0 312 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Dhrs7bQ99J47 323 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Arfgef1G3X9K3 1846 aaKnown RBP15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gm29276A0A087WNW5 222 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gm21117A0A087WPJ9 222 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gm20820A0A087WPP3 222 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gm20937A0A087WQA3 222 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gm21258A0A087WQC7 222 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gm28102A0A087WQL3 222 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gm21095A0A087WR14 222 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gm20792A0A087WRF5 222 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gm21865A0A087WRL2 222 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gm28576A0A087WRP6 222 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gm28490A0A087WRT9 222 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gm21294A0A087WS79 222 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gm20824A0A087WS97 222 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gm21996A0A087WSS9 222 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gm28870A0A0A6YW38 222 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gm29866A0A0A6YX04 222 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Itm2bO89051 266 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 NkaplQ5SZT7 395 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Nr0b1Q61066 472 aa15.3■□□□□ 0.04
Ccdc88b-201ENSMUST00000113440 Gm21627Q810R0 219 aa15.3■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 38.7 ms