RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 ChpfQ6IQX7 774 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Zc3h11aQ6NZF1 792 aaKnown RBP10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Sgpp2Q810K3 354 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 BpifcQ8C186 509 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Rbm34Q8C5L7 375 aaKnown RBP10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Mterf3Q8R3J4 412 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Fubp1Q91WJ8 651 aaKnown RBP10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Cstf1Q99LC2 431 aaKnown RBP10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Lrrc18Q9CQ07 262 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Q9CZV2 255 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Adam25Q9R159 760 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Spats1A2RRY8 269 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Rhox2gL7MUB9 191 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Sh3yl1O08641 340 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Klf10O89091 479 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Mup4P11590 178 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Psmd3P14685 530 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Vcam1P29533 739 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Agtr2P35374 363 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 B3gat3P58158 335 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Smpdl3bP58242 456 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Sec31bQ3TZ89 1158 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Rnft2Q3UF64 445 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Larp4bQ6A0A2 741 aaKnown RBP10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Ndufs1Q91VD9 727 aaKnown RBP10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Lrch4Q921G6 680 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Chmp1aQ921W0 196 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Clcc1Q99LI2 539 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 ProzQ9CQW3 399 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 5530400C23RikQ9D3I0 173 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Igdcc4Q9EQS9 1252 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Inpp5eQ9JII1 647 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Pramef6A2A8M8 474 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Lrrc31F6VYM1 502 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Kpna6O35345 536 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Nomo1Q6GQT9 1214 aaKnown RBP10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Tatdn1Q6P8M1 295 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Carns1Q6ZPS2 827 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Nod1Q8BHB0 953 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 4933402J07RikQ8BHX0 270 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Mterf2Q8BKY8 385 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Apoa5Q8C7G5 368 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Rftn2Q8CHX7 500 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Tmem98Q91X86 226 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Camk1Q91YS8 374 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Rtfdc1Q99K95 307 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Txndc17Q9CQM5 123 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Desi1Q9CQT7 168 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Cables1Q9ESJ1 568 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Naa10Q9QY36 235 aa10.11□□□□□ -0.79
Lig4-201ENSMUST00000095476 Zfp969A2ART2 485 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 2610001J05RikF2Z3Y9 59 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 5830473C10RikF8VQ07 620 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Yme1l1O88967 715 aaKnown RBP10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Il18r1Q61098 537 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Pcbp2Q61990 362 aaKnown RBP10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Lrrc15Q80X72 579 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Slc7a4Q8BLQ7 635 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Kank2Q8BX02 843 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Map2k7Q8CE90 535 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Asz1Q8VD46 475 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Olfr815Q8VFU0 316 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Setd7Q8VHL1 366 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Mrgpra2Q91WW4 305 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 HlcsQ920N2 722 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 PgcQ9D7R7 392 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 IgtpQ9DCE9 423 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 GabrqQ9JLF1 638 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Ripk3Q9QZL0 486 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Rfc2Q9WUK4 349 aaKnown RBP10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Slit2Q9R1B9 1521 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Syndig1A2ANU3 258 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Ttc23lA6H6E9 458 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 2310061I04RikB8JJ69 315 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Klhl8P59280 629 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Spin1Q61142 262 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Vrk2Q8BN21 503 aaKnown RBP10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Svs2Q8BS30 375 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Onecut3Q8K557 490 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Lsm1Q8VC85 133 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Serpinb1bQ8VHP7 382 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Rnf167Q91XF4 347 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Map4k3Q99JP0 894 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Ecrg4Q99LS0 148 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Ppil6Q9D6D8 278 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Olfr704Q9EPF6 315 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Hao2Q9NYQ2 353 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Abca17E9PX95 1733 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Gm7086A0A1W2P766 342 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 KantrA0A1W2P7I0 76 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Zfp37P17141 594 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Serpine1P22777 402 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Capza2P47754 286 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Kcnq1P97414 668 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Tmem63bQ3TWI9 832 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Sez6l2Q4V9Z5 910 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 AcdQ5EE38 416 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Ptpn21Q62136 1176 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Ube2j2Q6P073 259 aa10.1□□□□□ -0.79
Lig4-201ENSMUST00000095476 Tas2r3Q7TQA7 316 aa10.1□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 31 ms