RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 SNUPNO95149 360 aaKnown RBP17.23■□□□□ 0.35
PHGDH-232ENST00000641947 ACSL1P33121 698 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 TPMTP51580 245 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 BNIP1Q12981 228 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 FZD5Q13467 585 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 GAS6Q14393 721 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 UBE2R2Q712K3 238 aaPredicted RBP17.23■□□□□ 0.35
PHGDH-232ENST00000641947 SKA2Q8WVK7 121 aaPredicted RBP17.23■□□□□ 0.35
PHGDH-232ENST00000641947 RHBDF1Q96CC6 855 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 RILPQ96NA2 401 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 KCNA7Q96RP8 456 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 SLC17A9Q9BYT1 436 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 ZCCHC2Q9C0B9 1178 aaKnown RBP17.23■□□□□ 0.35
PHGDH-232ENST00000641947 STN1Q9H668 368 aaKnown RBP17.23■□□□□ 0.35
PHGDH-232ENST00000641947 RDH14Q9HBH5 336 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 EML4Q9HC35 981 aaKnown RBP17.23■□□□□ 0.35
PHGDH-232ENST00000641947 PREBQ9HCU5 417 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 EBF1Q9UH73 591 aa17.23■□□□□ 0.35
PHGDH-232ENST00000641947 TBC1D3DA0A087WVF3 549 aa17.22■□□□□ 0.35
PHGDH-232ENST00000641947 TBC1D3IA0A087WXS9 549 aa17.22■□□□□ 0.35
PHGDH-232ENST00000641947 TBC1D3EA0A087X179 549 aa17.22■□□□□ 0.35
PHGDH-232ENST00000641947 TBC1D3KA0A087X1G2 549 aa17.22■□□□□ 0.35
PHGDH-232ENST00000641947 TBC1D3FA6NER0 549 aaPredicted RBP17.22■□□□□ 0.35
PHGDH-232ENST00000641947 TBC1D3LB9A6J9 549 aa17.22■□□□□ 0.35
PHGDH-232ENST00000641947 GFYI3L273 518 aa17.22■□□□□ 0.35
PHGDH-232ENST00000641947 SKAP2O75563 359 aaPredicted RBP17.22■□□□□ 0.35
PHGDH-232ENST00000641947 MATN4O95460 622 aa17.22■□□□□ 0.35
PHGDH-232ENST00000641947 TBC1D3HP0C7X1 549 aa17.22■□□□□ 0.35
PHGDH-232ENST00000641947 VCLP18206 1134 aa17.22■□□□□ 0.35
PHGDH-232ENST00000641947 EPHA3P29320 983 aa17.22■□□□□ 0.35
PHGDH-232ENST00000641947 TRIM23P36406 574 aa17.22■□□□□ 0.35
PHGDH-232ENST00000641947 HSPA7P48741 367 aa17.22■□□□□ 0.35
PHGDH-232ENST00000641947 HK2P52789 917 aa17.22■□□□□ 0.35
PHGDH-232ENST00000641947 LCP2Q13094 533 aa17.22■□□□□ 0.35
PHGDH-232ENST00000641947 PCBP2Q15366 365 aaKnown RBP eCLIP17.22■□□□□ 0.35
PHGDH-232ENST00000641947 UGT3A2Q3SY77 523 aa17.22■□□□□ 0.35
PHGDH-232ENST00000641947 SYTL3Q4VX76 610 aa17.22■□□□□ 0.35
PHGDH-232ENST00000641947 TBC1D3GQ6DHY5 549 aa17.22■□□□□ 0.35
PHGDH-232ENST00000641947 TBC1D3CQ6IPX1 549 aa17.22■□□□□ 0.35
PHGDH-232ENST00000641947 ZNF852Q6ZMS4 543 aa17.22■□□□□ 0.35
PHGDH-232ENST00000641947 NEK10Q6ZWH5 1172 aa17.22■□□□□ 0.35
PHGDH-232ENST00000641947 TBC1D3Q8IZP1 549 aaPredicted RBP17.22■□□□□ 0.35
PHGDH-232ENST00000641947 HMGB4Q8WW32 186 aa17.22■□□□□ 0.35
PHGDH-232ENST00000641947 GLMNQ92990 594 aa17.22■□□□□ 0.35
PHGDH-232ENST00000641947 MYOCQ99972 504 aa17.22■□□□□ 0.35
PHGDH-232ENST00000641947 SLC12A9Q9BXP2 914 aa17.22■□□□□ 0.35
PHGDH-232ENST00000641947 MID1IP1Q9NPA3 183 aa17.22■□□□□ 0.35
PHGDH-232ENST00000641947 ARHGEF3Q9NR81 526 aa17.22■□□□□ 0.35
PHGDH-232ENST00000641947 TRAF6Q9Y4K3 522 aa17.22■□□□□ 0.35
PHGDH-232ENST00000641947 MAN2B1O00754 1011 aa17.21■□□□□ 0.35
PHGDH-232ENST00000641947 SDHDO14521 159 aa17.21■□□□□ 0.35
PHGDH-232ENST00000641947 CHUKO15111 745 aa17.21■□□□□ 0.35
PHGDH-232ENST00000641947 VEGFDO43915 354 aa17.21■□□□□ 0.35
PHGDH-232ENST00000641947 T-ENOLP0DO92 83 aa17.21■□□□□ 0.35
PHGDH-232ENST00000641947 GDF5P43026 501 aa17.21■□□□□ 0.35
PHGDH-232ENST00000641947 SCTRP47872 440 aa17.21■□□□□ 0.35
PHGDH-232ENST00000641947 ZP2Q05996 745 aa17.21■□□□□ 0.35
PHGDH-232ENST00000641947 BTKQ06187 659 aa17.21■□□□□ 0.35
PHGDH-232ENST00000641947 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.21■□□□□ 0.35
PHGDH-232ENST00000641947 FAM83HQ6ZRV2 1179 aaPredicted RBP17.21■□□□□ 0.35
PHGDH-232ENST00000641947 SYVN1Q86TM6 617 aa17.21■□□□□ 0.35
PHGDH-232ENST00000641947 KBTBD6Q86V97 674 aa17.21■□□□□ 0.35
PHGDH-232ENST00000641947 TREML1Q86YW5 311 aa17.21■□□□□ 0.35
PHGDH-232ENST00000641947 SLC22A15Q8IZD6 547 aa17.21■□□□□ 0.35
PHGDH-232ENST00000641947 LINC00615Q96LM1 132 aaPredicted RBP17.21■□□□□ 0.35
PHGDH-232ENST00000641947 EGFL8Q99944 293 aa17.21■□□□□ 0.35
PHGDH-232ENST00000641947 TM7SF3Q9NS93 570 aa17.21■□□□□ 0.35
PHGDH-232ENST00000641947 VTI1BQ9UEU0 232 aa17.21■□□□□ 0.35
PHGDH-232ENST00000641947 USP34Q70CQ2 3546 aa17.21■□□□□ 0.35
PHGDH-232ENST00000641947 LRP4O75096 1905 aa17.21■□□□□ 0.35
PHGDH-232ENST00000641947 CBX6O95503 412 aa17.2■□□□□ 0.34
PHGDH-232ENST00000641947 FUCA1P04066 466 aa17.2■□□□□ 0.34
PHGDH-232ENST00000641947 C8GP07360 202 aa17.2■□□□□ 0.34
PHGDH-232ENST00000641947 ACADMP11310 421 aa17.2■□□□□ 0.34
PHGDH-232ENST00000641947 TEAD1P28347 426 aa17.2■□□□□ 0.34
PHGDH-232ENST00000641947 RPIAP49247 311 aa17.2■□□□□ 0.34
PHGDH-232ENST00000641947 ABRQ12979 859 aa17.2■□□□□ 0.34
PHGDH-232ENST00000641947 SGCGQ13326 291 aa17.2■□□□□ 0.34
PHGDH-232ENST00000641947 GTF2H3Q13889 308 aa17.2■□□□□ 0.34
PHGDH-232ENST00000641947 UBAP2LQ14157 1087 aaKnown RBP17.2■□□□□ 0.34
PHGDH-232ENST00000641947 MAP7D1Q3KQU3 841 aa17.2■□□□□ 0.34
PHGDH-232ENST00000641947 CCSMST1Q4G0I0 132 aa17.2■□□□□ 0.34
PHGDH-232ENST00000641947 GOLGA7Q7Z5G4 137 aa17.2■□□□□ 0.34
PHGDH-232ENST00000641947 OR52B6Q8NGF0 335 aa17.2■□□□□ 0.34
PHGDH-232ENST00000641947 UBTD2Q8WUN7 234 aa17.2■□□□□ 0.34
PHGDH-232ENST00000641947 TMEM159Q96B96 161 aa17.2■□□□□ 0.34
PHGDH-232ENST00000641947 WDR26Q9H7D7 661 aa17.2■□□□□ 0.34
PHGDH-232ENST00000641947 PARVBQ9HBI1 364 aa17.2■□□□□ 0.34
PHGDH-232ENST00000641947 SLC23A2Q9UGH3 650 aa17.2■□□□□ 0.34
PHGDH-232ENST00000641947 GPR34Q9UPC5 381 aa17.2■□□□□ 0.34
PHGDH-232ENST00000641947 NCKAP1Q9Y2A7 1128 aa17.2■□□□□ 0.34
PHGDH-232ENST00000641947 RRP15Q9Y3B9 282 aaKnown RBP17.2■□□□□ 0.34
PHGDH-232ENST00000641947 ARHGEF33A8MVX0 844 aa17.2■□□□□ 0.34
PHGDH-232ENST00000641947 C10orf142B7Z368 130 aa17.2■□□□□ 0.34
PHGDH-232ENST00000641947 E9PBE3 544 aa17.2■□□□□ 0.34
PHGDH-232ENST00000641947 SLCO1B7G3V0H7 640 aa17.2■□□□□ 0.34
PHGDH-232ENST00000641947 SLC31A1O15431 190 aa17.2■□□□□ 0.34
PHGDH-232ENST00000641947 KLHL41O60662 606 aa17.2■□□□□ 0.34
PHGDH-232ENST00000641947 POP7O75817 140 aaKnown RBP17.2■□□□□ 0.34
PHGDH-232ENST00000641947 S100BP04271 92 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms