RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 SLC24A2Q9UI40 661 aa14.67□□□□□ -0.06
PHGDH-231ENST00000641939 ANAPC5Q9UJX4 755 aa14.67□□□□□ -0.06
PHGDH-231ENST00000641939 PCDHB11Q9Y5F2 797 aa14.67□□□□□ -0.06
PHGDH-231ENST00000641939 B3GALT1Q9Y5Z6 326 aa14.67□□□□□ -0.06
PHGDH-231ENST00000641939 OR5K3A6NET4 321 aa14.66□□□□□ -0.06
PHGDH-231ENST00000641939 F8W8V4 182 aa14.66□□□□□ -0.06
PHGDH-231ENST00000641939 STMND1H3BQB6 276 aa14.66□□□□□ -0.06
PHGDH-231ENST00000641939 LIN7AO14910 233 aaPredicted RBP14.66□□□□□ -0.06
PHGDH-231ENST00000641939 ZNF185O15231 689 aa14.66□□□□□ -0.06
PHGDH-231ENST00000641939 OR56A5P0C7T3 313 aa14.66□□□□□ -0.06
PHGDH-231ENST00000641939 TCP1P17987 556 aaKnown RBP14.66□□□□□ -0.06
PHGDH-231ENST00000641939 NMBRP28336 390 aa14.66□□□□□ -0.06
PHGDH-231ENST00000641939 PDHA2P29803 388 aa14.66□□□□□ -0.06
PHGDH-231ENST00000641939 PREPP48147 710 aa14.66□□□□□ -0.06
PHGDH-231ENST00000641939 FNTAP49354 379 aa14.66□□□□□ -0.06
PHGDH-231ENST00000641939 SEMA3AQ14563 771 aa14.66□□□□□ -0.06
PHGDH-231ENST00000641939 AARS2Q5JTZ9 985 aaKnown RBP14.66□□□□□ -0.06
PHGDH-231ENST00000641939 CACHD1Q5VU97 1274 aa14.66□□□□□ -0.06
PHGDH-231ENST00000641939 ANKRD22Q5VYY1 191 aa14.66□□□□□ -0.06
PHGDH-231ENST00000641939 ANKS6Q68DC2 871 aa14.66□□□□□ -0.06
PHGDH-231ENST00000641939 CEACAM20Q6UY09 585 aa14.66□□□□□ -0.06
PHGDH-231ENST00000641939 FAM92BQ6ZTR7 304 aa14.66□□□□□ -0.06
PHGDH-231ENST00000641939 GPR155Q7Z3F1 870 aa14.66□□□□□ -0.06
PHGDH-231ENST00000641939 PRSS42Q7Z5A4 293 aa14.66□□□□□ -0.06
PHGDH-231ENST00000641939 DTX1Q86Y01 620 aa14.66□□□□□ -0.06
PHGDH-231ENST00000641939 GRK7Q8WTQ7 553 aa14.66□□□□□ -0.06
PHGDH-231ENST00000641939 CPT1BQ92523 772 aa14.66□□□□□ -0.06
PHGDH-231ENST00000641939 ELMO1Q92556 727 aa14.66□□□□□ -0.06
PHGDH-231ENST00000641939 CCNL2Q96S94 520 aaPredicted RBP14.66□□□□□ -0.06
PHGDH-231ENST00000641939 ZPBPQ9BS86 351 aa14.66□□□□□ -0.06
PHGDH-231ENST00000641939 KIFC1Q9BW19 673 aa14.66□□□□□ -0.06
PHGDH-231ENST00000641939 ZNF768Q9H5H4 540 aaKnown RBP14.66□□□□□ -0.06
PHGDH-231ENST00000641939 FBXO8Q9NRD0 319 aa14.66□□□□□ -0.06
PHGDH-231ENST00000641939 SYBUQ9NX95 663 aa14.66□□□□□ -0.06
PHGDH-231ENST00000641939 NEU2Q9Y3R4 380 aa14.66□□□□□ -0.06
PHGDH-231ENST00000641939 CD3EAPO15446 510 aaKnown RBP14.65□□□□□ -0.06
PHGDH-231ENST00000641939 KIF1CO43896 1103 aaKnown RBP14.65□□□□□ -0.06
PHGDH-231ENST00000641939 TTPAP49638 278 aa14.65□□□□□ -0.06
PHGDH-231ENST00000641939 SEPHS1P49903 392 aa14.65□□□□□ -0.06
PHGDH-231ENST00000641939 GNG11P61952 73 aa14.65□□□□□ -0.06
PHGDH-231ENST00000641939 PPP1CAP62136 330 aa14.65□□□□□ -0.06
PHGDH-231ENST00000641939 VAC14Q08AM6 782 aa14.65□□□□□ -0.06
PHGDH-231ENST00000641939 ARHGAP40Q5TG30 622 aa14.65□□□□□ -0.06
PHGDH-231ENST00000641939 ARMC3Q5W041 872 aa14.65□□□□□ -0.06
PHGDH-231ENST00000641939 CCDC81Q6ZN84 652 aa14.65□□□□□ -0.06
PHGDH-231ENST00000641939 ACVR1CQ8NER5 493 aa14.65□□□□□ -0.06
PHGDH-231ENST00000641939 KLHL6Q8WZ60 621 aa14.65□□□□□ -0.06
PHGDH-231ENST00000641939 FERD3LQ96RJ6 166 aa14.65□□□□□ -0.06
PHGDH-231ENST00000641939 MVB12BQ9H7P6 319 aa14.65□□□□□ -0.06
PHGDH-231ENST00000641939 HRASLS2Q9NWW9 162 aa14.65□□□□□ -0.06
PHGDH-231ENST00000641939 SIDT1Q9NXL6 827 aaKnown RBP14.65□□□□□ -0.06
PHGDH-231ENST00000641939 MARCH4Q9P2E8 410 aaPredicted RBP14.65□□□□□ -0.06
PHGDH-231ENST00000641939 PYCARDQ9ULZ3 195 aa14.65□□□□□ -0.06
PHGDH-231ENST00000641939 SOX13Q9UN79 622 aa14.65□□□□□ -0.06
PHGDH-231ENST00000641939 ATMQ13315 3056 aa14.64□□□□□ -0.07
PHGDH-231ENST00000641939 ATRXP46100 2492 aa14.64□□□□□ -0.07
PHGDH-231ENST00000641939 TEX51A0A1B0GUA7 166 aa14.64□□□□□ -0.07
PHGDH-231ENST00000641939 POLR1CO15160 346 aaPredicted RBP14.64□□□□□ -0.07
PHGDH-231ENST00000641939 AVILO75366 819 aa14.64□□□□□ -0.07
PHGDH-231ENST00000641939 TMEM63AO94886 807 aa14.64□□□□□ -0.07
PHGDH-231ENST00000641939 SPTBP11277 2137 aa14.64□□□□□ -0.07
PHGDH-231ENST00000641939 MLNP12872 115 aa14.64□□□□□ -0.07
PHGDH-231ENST00000641939 PLOD1Q02809 727 aaPredicted RBP14.64□□□□□ -0.07
PHGDH-231ENST00000641939 BOP1Q14137 746 aaKnown RBP14.64□□□□□ -0.07
PHGDH-231ENST00000641939 BRD3Q15059 726 aa14.64□□□□□ -0.07
PHGDH-231ENST00000641939 SYTL3Q4VX76 610 aa14.64□□□□□ -0.07
PHGDH-231ENST00000641939 DNTTIP2Q5QJE6 756 aaKnown RBP14.64□□□□□ -0.07
PHGDH-231ENST00000641939 ARMC6Q6NXE6 501 aa14.64□□□□□ -0.07
PHGDH-231ENST00000641939 LDB1Q86U70 411 aaPredicted RBP14.64□□□□□ -0.07
PHGDH-231ENST00000641939 CAND1Q86VP6 1230 aaKnown RBP14.64□□□□□ -0.07
PHGDH-231ENST00000641939 OOSP2Q86WS3 158 aa14.64□□□□□ -0.07
PHGDH-231ENST00000641939 MPP5Q8N3R9 675 aa14.64□□□□□ -0.07
PHGDH-231ENST00000641939 MCUQ8NE86 351 aa14.64□□□□□ -0.07
PHGDH-231ENST00000641939 OR4E2Q8NGC2 313 aa14.64□□□□□ -0.07
PHGDH-231ENST00000641939 SNRNP27Q8WVK2 155 aaKnown RBP14.64□□□□□ -0.07
PHGDH-231ENST00000641939 TFGQ92734 400 aaPredicted RBP14.64□□□□□ -0.07
PHGDH-231ENST00000641939 MFSD3Q96ES6 412 aa14.64□□□□□ -0.07
PHGDH-231ENST00000641939 CD180Q99467 661 aa14.64□□□□□ -0.07
PHGDH-231ENST00000641939 CTRCQ99895 268 aa14.64□□□□□ -0.07
PHGDH-231ENST00000641939 TSSK1BQ9BXA7 367 aa14.64□□□□□ -0.07
PHGDH-231ENST00000641939 XAB2Q9HCS7 855 aaKnown RBP14.64□□□□□ -0.07
PHGDH-231ENST00000641939 APMAPQ9HDC9 416 aa14.64□□□□□ -0.07
PHGDH-231ENST00000641939 SEMA5BQ9P283 1151 aa14.64□□□□□ -0.07
PHGDH-231ENST00000641939 SNRNP200O75643 2136 aaKnown RBP14.63□□□□□ -0.07
PHGDH-231ENST00000641939 SLC5A10A0PJK1 596 aa14.63□□□□□ -0.07
PHGDH-231ENST00000641939 OR6C74A6NCV1 312 aa14.63□□□□□ -0.07
PHGDH-231ENST00000641939 TLCD2A6NGC4 264 aa14.63□□□□□ -0.07
PHGDH-231ENST00000641939 K7ENP7 123 aa14.63□□□□□ -0.07
PHGDH-231ENST00000641939 PRMT5O14744 637 aaPredicted RBP14.63□□□□□ -0.07
PHGDH-231ENST00000641939 VAPBO95292 243 aa14.63□□□□□ -0.07
PHGDH-231ENST00000641939 NELFEP18615 380 aaKnown RBP14.63□□□□□ -0.07
PHGDH-231ENST00000641939 ARNTP27540 789 aa14.63□□□□□ -0.07
PHGDH-231ENST00000641939 ATP1A2P50993 1020 aa14.63□□□□□ -0.07
PHGDH-231ENST00000641939 FOXM1Q08050 763 aa14.63□□□□□ -0.07
PHGDH-231ENST00000641939 PPP1R7Q15435 360 aa14.63□□□□□ -0.07
PHGDH-231ENST00000641939 MANEAQ5SRI9 462 aa14.63□□□□□ -0.07
PHGDH-231ENST00000641939 PAPD7Q5XG87 772 aaKnown RBP14.63□□□□□ -0.07
PHGDH-231ENST00000641939 CASC4Q6P4E1 433 aa14.63□□□□□ -0.07
PHGDH-231ENST00000641939 INO80CQ6PI98 192 aaPredicted RBP14.63□□□□□ -0.07
PHGDH-231ENST00000641939 CES3Q6UWW8 571 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms