RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 TRIM60Q495X7 471 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 Q5BKY6 102 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 PRMT9Q6P2P2 845 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 HACD2Q6Y1H2 254 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 BEND5Q7L4P6 421 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 NRARPQ7Z6K4 114 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 RIMKLAQ8IXN7 391 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 CACTIN-AS1Q8N1I8 211 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 OR2T12Q8NG77 320 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 OR13C4Q8NGS5 318 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 UBASH3BQ8TF42 649 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 COLEC11Q9BWP8 271 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 DKK3Q9UBP4 350 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 CARD8Q9Y2G2 431 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 MKI67P46013 3256 aaKnown RBP13.54□□□□□ -0.24
SCARB2-227ENST00000640957 BBIP1A8MTZ0 92 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 AIREO43918 545 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 ARHGAP1Q07960 439 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 ZMAT1Q5H9K5 638 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 CYP20A1Q6UW02 462 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 SYVN1Q86TM6 617 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 PROKR1Q8TCW9 393 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 LRRC3Q9BY71 257 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 SLC39A8Q9C0K1 460 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 GLOD4Q9HC38 313 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 POLR3BQ9NW08 1133 aaPredicted RBP13.54□□□□□ -0.24
SCARB2-227ENST00000640957 NPEPPSL1A6NEC2 478 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 SLC22A1O15245 554 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 FHP07954 510 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 EDNRBP24530 442 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 DCTP40126 519 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 DSC2Q02487 901 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 SDE2Q6IQ49 451 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 PAQR3Q6TCH7 311 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 CEP68Q76N32 757 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 RAB44Q7Z6P3 723 aaPredicted RBP13.54□□□□□ -0.24
SCARB2-227ENST00000640957 ELMOD2Q8IZ81 293 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 TMEM199Q8N511 208 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 LEMD2Q8NC56 503 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 TP53INP1Q96A56 240 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 MRGPRX2Q96LB1 330 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 ZNF300Q96RE9 604 aaPredicted RBP13.54□□□□□ -0.24
SCARB2-227ENST00000640957 TRIM54Q9BYV2 358 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 THG1LQ9NWX6 298 aaKnown RBP13.54□□□□□ -0.24
SCARB2-227ENST00000640957 EIF2B4Q9UI10 523 aaKnown RBP13.54□□□□□ -0.24
SCARB2-227ENST00000640957 LEF1Q9UJU2 399 aaPredicted RBP13.54□□□□□ -0.24
SCARB2-227ENST00000640957 NRCAMQ92823 1304 aa13.54□□□□□ -0.24
SCARB2-227ENST00000640957 CASTOR2A6NHX0 329 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 CENPXA8MT69 81 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 MTHFD2P13995 350 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 PAMP19021 973 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 ITIH1P19827 911 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 SOX4Q06945 474 aaPredicted RBP13.53□□□□□ -0.24
SCARB2-227ENST00000640957 NR6A1Q15406 480 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 NDUFA5Q16718 116 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 ZNF404Q494X3 552 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 IL27RAQ6UWB1 636 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 SLC22A9Q8IVM8 553 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 FBXO39Q8N4B4 442 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 LPPQ93052 612 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 TXNDC15Q96J42 360 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 NUAK2Q9H093 628 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 SLC52A3Q9NQ40 469 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 SLC6A13Q9NSD5 602 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 ZNF225Q9UK10 706 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 IGKV6-21A0A0C4DH24 114 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 SMLR1H3BR10 107 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 BTN3A1O00481 513 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 SERPINA1P01009 418 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 CBLP22681 906 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 IFNA8P32881 189 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 SLC26A2P50443 739 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 CASP9P55211 416 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 GPLD1P80108 840 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 SLAMF1Q13291 335 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 GALNT3Q14435 633 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 SEMA3AQ14563 771 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 TBRG1Q3YBR2 411 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 GPR153Q6NV75 609 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 NOTUMQ6P988 496 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 ZNF549Q6P9A3 640 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 DCP2Q8IU60 420 aaKnown RBP13.53□□□□□ -0.24
SCARB2-227ENST00000640957 KRTCAP2Q8N6L1 136 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 B3GALNT2Q8NCR0 500 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 VMP1Q96GC9 406 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 YTHDF1Q9BYJ9 559 aaKnown RBP13.53□□□□□ -0.24
SCARB2-227ENST00000640957 RANGRFQ9HD47 186 aaPredicted RBP13.53□□□□□ -0.24
SCARB2-227ENST00000640957 COMMD8Q9NX08 183 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 NSMCE4AQ9NXX6 385 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 EHD3Q9NZN3 535 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 GMPPBQ9Y5P6 360 aa13.53□□□□□ -0.24
SCARB2-227ENST00000640957 TLR5O60602 858 aa13.52□□□□□ -0.24
SCARB2-227ENST00000640957 PAPSS2O95340 614 aaPredicted RBP13.52□□□□□ -0.24
SCARB2-227ENST00000640957 CDKN1CP49918 316 aaPredicted RBP13.52□□□□□ -0.24
SCARB2-227ENST00000640957 SNX17Q15036 470 aa13.52□□□□□ -0.24
SCARB2-227ENST00000640957 SLC27A1Q6PCB7 646 aa13.52□□□□□ -0.24
SCARB2-227ENST00000640957 HID1Q8IV36 788 aa13.52□□□□□ -0.24
SCARB2-227ENST00000640957 NATD1Q8N6N6 113 aa13.52□□□□□ -0.24
SCARB2-227ENST00000640957 CCDC126Q96EE4 140 aa13.52□□□□□ -0.24
SCARB2-227ENST00000640957 UBXN10Q96LJ8 280 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms