RNA–Protein interactions for RNA: ENST00000637988.1

SCN1A-217, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,562 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-217ENST00000637988 ZNF432O94892 652 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 PRKAR1AP10644 381 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 BRCC3P46736 316 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 RIPK1Q13546 671 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 NAE1Q13564 534 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 ITIH4Q14624 930 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 TIGD6Q17RP2 521 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 FAM214AQ32MH5 1076 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 CARD16Q5EG05 197 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 MANEAQ5SRI9 462 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 OPA3Q9H6K4 179 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 SLC24A3Q9HC58 644 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 C2orf72A6NCS6 295 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 KHNYNO15037 678 aaKnown RBP6.05□□□□□ -1.44
SCN1A-217ENST00000637988 HSPA12AO43301 675 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 RGS10O43665 173 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 OR1I1O60431 355 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 REM1O75628 298 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 NDST3O95803 873 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 ZNF8P17098 575 aaPredicted RBP6.05□□□□□ -1.44
SCN1A-217ENST00000637988 TFEBP19484 476 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 MALLQ13021 153 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 TRMT5Q32P41 509 aaKnown RBP6.05□□□□□ -1.44
SCN1A-217ENST00000637988 CATSPEREQ5SY80 951 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 SULT1C3Q6IMI6 304 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 DENND5AQ6IQ26 1287 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 GRASPQ7Z6J2 395 aaPredicted RBP6.05□□□□□ -1.44
SCN1A-217ENST00000637988 CHERPQ8IWX8 916 aaKnown RBP6.05□□□□□ -1.44
SCN1A-217ENST00000637988 SLC47A1Q96FL8 570 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 FAM163AQ96GL9 167 aaPredicted RBP6.05□□□□□ -1.44
SCN1A-217ENST00000637988 TTYH3Q9C0H2 523 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 MMADHCQ9H3L0 296 aaPredicted RBP6.05□□□□□ -1.44
SCN1A-217ENST00000637988 GGA2Q9UJY4 613 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 C3orf18Q9UK00 162 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 SAMHD1Q9Y3Z3 626 aaKnown RBP6.05□□□□□ -1.44
SCN1A-217ENST00000637988 PIGBOS1A0A0B4J2F0 54 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 HAT1O14929 419 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 CPNE6O95741 557 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 FBLP22087 321 aaKnown RBP6.05□□□□□ -1.44
SCN1A-217ENST00000637988 ENPEPQ07075 957 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 CD47Q08722 323 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 GBX1Q14549 363 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 ERICH5Q6P6B1 374 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 KCT2Q8NC54 265 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 ANKK1Q8NFD2 765 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 ARMC5Q96C12 935 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 SCLYQ96I15 445 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 ARHGAP39Q9C0H5 1083 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 CDT1Q9H211 546 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 FBRSQ9HAH7 460 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 PCDHB10Q9UN67 800 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 GMPPBQ9Y5P6 360 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 SALL3Q9BXA9 1300 aa6.05□□□□□ -1.44
SCN1A-217ENST00000637988 NPEPPSL1A6NEC2 478 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 OR5K4A6NMS3 321 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 ANXA2P2A6NMY6 339 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 L7N2F9 121 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 CDC7O00311 574 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 P04436 131 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 ANXA2P07355 339 aaKnown RBP6.04□□□□□ -1.44
SCN1A-217ENST00000637988 RARAP10276 462 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 GP1BBP13224 206 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 USP46P62068 366 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 VAMP2P63027 116 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 CYP4F8P98187 520 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 DPYSL3Q14195 570 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 DLG2Q15700 870 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 ABHD17BQ5VST6 288 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 SPATA19Q7Z5L4 167 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 NATD1Q8N6N6 113 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 ZNF565Q8N9K5 539 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 OR2L8Q8NGY9 312 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 CCT8L2Q96SF2 557 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 POLE4Q9NR33 117 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 ZNF541Q9H0D2 1346 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 C3P01024 1663 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 PHGDHO43175 533 aaKnown RBP6.04□□□□□ -1.44
SCN1A-217ENST00000637988 TBX1O43435 398 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 AKAP3O75969 853 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 ITGA2BP08514 1039 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 GSTT2P0CG29 244 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 GSTT2BP0CG30 244 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 GNAZP19086 355 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 BGNP21810 368 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 PTPN5P54829 565 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 ADAM8P78325 824 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 RUNX2Q13950 521 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 WDR93Q6P2C0 686 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 LNX2Q8N448 690 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 PPP1R13LQ8WUF5 828 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 CASD1Q96PB1 797 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 NDNQ99608 321 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 DUSP23Q9BVJ7 150 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 GLOD4Q9HC38 313 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 IL23AQ9NPF7 189 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 CORO1CQ9ULV4 474 aaPredicted RBP6.04□□□□□ -1.44
SCN1A-217ENST00000637988 A8MUA0 341 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 SNRPB2P08579 225 aaKnown RBP6.04□□□□□ -1.44
SCN1A-217ENST00000637988 PIRTP0C851 137 aa6.04□□□□□ -1.44
SCN1A-217ENST00000637988 GOT1P17174 413 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms