RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 PSMA3P25788 255 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 CD82P27701 267 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 CSTF2P33240 577 aaKnown RBP eCLIP7.67□□□□□ -1.18
PNKP-229ENST00000637897 MAPK9P45984 424 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 ATP5OP48047 213 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 EIF3EP60228 445 aaKnown RBP7.67□□□□□ -1.18
PNKP-229ENST00000637897 CAV1Q03135 178 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 CALCOCO2Q13137 446 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 LAMB3Q13751 1172 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 PTK6Q13882 451 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 TAF1AQ15573 450 aaPredicted RBP7.67□□□□□ -1.18
PNKP-229ENST00000637897 TRADDQ15628 312 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 INSCQ1MX18 579 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 GLIPR1L2Q4G1C9 344 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 TAF1BQ53T94 588 aaPredicted RBP7.67□□□□□ -1.18
PNKP-229ENST00000637897 MANEAQ5SRI9 462 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 METRNLQ641Q3 311 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 CAPRIN2Q6IMN6 1127 aaKnown RBP7.67□□□□□ -1.18
PNKP-229ENST00000637897 TTC27Q6P3X3 843 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 LRIG3Q6UXM1 1119 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 BZW1Q7L1Q6 419 aaKnown RBP7.67□□□□□ -1.18
PNKP-229ENST00000637897 DET1Q7L5Y6 550 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 GLT6D1Q7Z4J2 308 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 FAM129CQ86XR2 697 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 PIANPQ8IYJ0 282 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 IQCKQ8N0W5 287 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 GLIS1Q8NBF1 620 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 TTC13Q8NBP0 860 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 BBOF1Q8ND07 529 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 OR10G6Q8NH81 332 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 ZNF398Q8TD17 642 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 C1orf54Q8WWF1 131 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 KLHL6Q8WZ60 621 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 RMDN2Q96LZ7 410 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 SPATA13Q96N96 652 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 TGM7Q96PF1 710 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 DPYSL5Q9BPU6 564 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 TRIM31Q9BZY9 425 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 ZNF768Q9H5H4 540 aaKnown RBP7.67□□□□□ -1.18
PNKP-229ENST00000637897 FAM96AQ9H5X1 160 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 ZDHHC18Q9NUE0 388 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 POT1Q9NUX5 634 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 PIH1D1Q9NWS0 290 aaKnown RBP7.67□□□□□ -1.18
PNKP-229ENST00000637897 WHRNQ9P202 907 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 EPHA6Q9UF33 1036 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 PSMD13Q9UNM6 376 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 PRSS21Q9Y6M0 314 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 FER1L5A0AVI2 2057 aa7.67□□□□□ -1.18
PNKP-229ENST00000637897 SNRNP200O75643 2136 aaKnown RBP7.66□□□□□ -1.18
PNKP-229ENST00000637897 GOLGA6L10A6NI86 522 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 PDZK1P1A8MUH7 402 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 B8ZZF3 427 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 K7EM74 188 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 AGPSO00116 658 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 PPFIA2O75334 1257 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 STK17BO94768 372 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 PRAMEF1O95521 474 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 SYF2O95926 243 aaKnown RBP7.66□□□□□ -1.18
PNKP-229ENST00000637897 TPBGLP0DKB5 382 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 ETS1P14921 441 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 FOLR1P15328 257 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 TPH1P17752 444 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 LPOP22079 712 aaPredicted RBP7.66□□□□□ -1.18
PNKP-229ENST00000637897 GRIA1P42261 906 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 RPL21P46778 160 aaKnown RBP7.66□□□□□ -1.18
PNKP-229ENST00000637897 CAPZBP47756 277 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 SEPHS1P49903 392 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 GEMP55040 296 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 TMPRSS15P98073 1019 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 KCNAB1Q14722 419 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 SLMAPQ14BN4 828 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 OASLQ15646 514 aaKnown RBP7.66□□□□□ -1.18
PNKP-229ENST00000637897 BCL7AQ4VC05 210 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 PRAMEF17Q5VTA0 474 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 FAM92BQ6ZTR7 304 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 CEP128Q6ZU80 1094 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 PRSS42Q7Z5A4 293 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 TMEM135Q86UB9 458 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 TRAPPC5Q8IUR0 188 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 SPNS2Q8IVW8 549 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 TMEM151BQ8IW70 566 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 CACNA2D3Q8IZS8 1091 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 CCDC89Q8N998 374 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 FAM71DQ8N9W8 422 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 BRSK1Q8TDC3 778 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 ATG4AQ8WYN0 398 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 SNF8Q96H20 258 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 AHCYL2Q96HN2 611 aaKnown RBP7.66□□□□□ -1.18
PNKP-229ENST00000637897 SLC41A2Q96JW4 573 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 DNAJC1Q96KC8 554 aaKnown RBP7.66□□□□□ -1.18
PNKP-229ENST00000637897 LINC00615Q96LM1 132 aaPredicted RBP7.66□□□□□ -1.18
PNKP-229ENST00000637897 MAP3K3Q99759 626 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 SH3GL2Q99962 352 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 TWSG1Q9GZX9 223 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 RAB33BQ9H082 229 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 WWP1Q9H0M0 922 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 RAD18Q9NS91 495 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 HAUS2Q9NVX0 235 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 GRHL1Q9NZI5 618 aa7.66□□□□□ -1.18
PNKP-229ENST00000637897 HACD3Q9P035 362 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms