RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 RIMKLBQ9ULI2 386 aa13.47□□□□□ -0.25
PNKP-228ENST00000637325 JRKLQ9Y4A0 524 aa13.47□□□□□ -0.25
PNKP-228ENST00000637325 TCAF1Q9Y4C2 921 aa13.47□□□□□ -0.25
PNKP-228ENST00000637325 PIEZO2Q9H5I5 2752 aa13.47□□□□□ -0.25
PNKP-228ENST00000637325 UBA6A0AVT1 1052 aaPredicted RBP13.46□□□□□ -0.25
PNKP-228ENST00000637325 OR6C74A6NCV1 312 aa13.46□□□□□ -0.25
PNKP-228ENST00000637325 OR5K3A6NET4 321 aa13.46□□□□□ -0.25
PNKP-228ENST00000637325 STK17BO94768 372 aa13.46□□□□□ -0.25
PNKP-228ENST00000637325 FTH1P02794 183 aa13.46□□□□□ -0.25
PNKP-228ENST00000637325 OR56A5P0C7T3 313 aa13.46□□□□□ -0.25
PNKP-228ENST00000637325 MAP4P27816 1152 aaKnown RBP13.46□□□□□ -0.25
PNKP-228ENST00000637325 PREPP48147 710 aa13.46□□□□□ -0.25
PNKP-228ENST00000637325 NPY2RP49146 381 aa13.46□□□□□ -0.25
PNKP-228ENST00000637325 TERF1P54274 439 aa13.46□□□□□ -0.25
PNKP-228ENST00000637325 PPP1CAP62136 330 aa13.46□□□□□ -0.25
PNKP-228ENST00000637325 SH3BP2P78314 561 aa13.46□□□□□ -0.25
PNKP-228ENST00000637325 RPA4Q13156 261 aa13.46□□□□□ -0.25
PNKP-228ENST00000637325 SYTL3Q4VX76 610 aa13.46□□□□□ -0.25
PNKP-228ENST00000637325 PCID2Q5JVF3 399 aa13.46□□□□□ -0.25
PNKP-228ENST00000637325 PACS1Q6VY07 963 aa13.46□□□□□ -0.25
PNKP-228ENST00000637325 CERS6Q6ZMG9 384 aa13.46□□□□□ -0.25
PNKP-228ENST00000637325 RASGRP3Q8IV61 690 aa13.46□□□□□ -0.25
PNKP-228ENST00000637325 SIDT2Q8NBJ9 832 aaKnown RBP13.46□□□□□ -0.25
PNKP-228ENST00000637325 ACVR1CQ8NER5 493 aa13.46□□□□□ -0.25
PNKP-228ENST00000637325 OR4E2Q8NGC2 313 aa13.46□□□□□ -0.25
PNKP-228ENST00000637325 KLHL6Q8WZ60 621 aa13.46□□□□□ -0.25
PNKP-228ENST00000637325 ELMO1Q92556 727 aa13.46□□□□□ -0.25
PNKP-228ENST00000637325 UBXN4Q92575 508 aa13.46□□□□□ -0.25
PNKP-228ENST00000637325 ANP32BQ92688 251 aaKnown RBP13.46□□□□□ -0.25
PNKP-228ENST00000637325 KIAA1143Q96AT1 154 aaPredicted RBP13.46□□□□□ -0.25
PNKP-228ENST00000637325 ELMO2Q96JJ3 720 aa13.46□□□□□ -0.25
PNKP-228ENST00000637325 NAP1L3Q99457 506 aaPredicted RBP13.46□□□□□ -0.25
PNKP-228ENST00000637325 CD180Q99467 661 aa13.46□□□□□ -0.25
PNKP-228ENST00000637325 TRIT1Q9H3H1 467 aaKnown RBP13.46□□□□□ -0.25
PNKP-228ENST00000637325 SIDT1Q9NXL6 827 aaKnown RBP13.46□□□□□ -0.25
PNKP-228ENST00000637325 PRSS21Q9Y6M0 314 aa13.46□□□□□ -0.25
PNKP-228ENST00000637325 ATMQ13315 3056 aa13.46□□□□□ -0.25
PNKP-228ENST00000637325 LIN7AO14910 233 aaPredicted RBP13.45□□□□□ -0.26
PNKP-228ENST00000637325 NELFEP18615 380 aaKnown RBP13.45□□□□□ -0.26
PNKP-228ENST00000637325 PDHA2P29803 388 aa13.45□□□□□ -0.26
PNKP-228ENST00000637325 CD151P48509 253 aa13.45□□□□□ -0.26
PNKP-228ENST00000637325 VPS41P49754 854 aa13.45□□□□□ -0.26
PNKP-228ENST00000637325 SARNPP82979 210 aaKnown RBP13.45□□□□□ -0.26
PNKP-228ENST00000637325 IL11RAQ14626 422 aa13.45□□□□□ -0.26
PNKP-228ENST00000637325 BRD3Q15059 726 aa13.45□□□□□ -0.26
PNKP-228ENST00000637325 TRIP13Q15645 432 aaPredicted RBP13.45□□□□□ -0.26
PNKP-228ENST00000637325 XKR5Q6UX68 686 aa13.45□□□□□ -0.26
PNKP-228ENST00000637325 PRELID2Q8N945 189 aa13.45□□□□□ -0.26
PNKP-228ENST00000637325 PHC3Q8NDX5 983 aa13.45□□□□□ -0.26
PNKP-228ENST00000637325 LCN9Q8WX39 176 aa13.45□□□□□ -0.26
PNKP-228ENST00000637325 TFGQ92734 400 aaPredicted RBP13.45□□□□□ -0.26
PNKP-228ENST00000637325 PEX13Q92968 403 aa13.45□□□□□ -0.26
PNKP-228ENST00000637325 MAGOHBQ96A72 148 aaKnown RBP13.45□□□□□ -0.26
PNKP-228ENST00000637325 WBP1Q96G27 269 aa13.45□□□□□ -0.26
PNKP-228ENST00000637325 ZNF778Q96MU6 729 aa13.45□□□□□ -0.26
PNKP-228ENST00000637325 MAP3K3Q99759 626 aa13.45□□□□□ -0.26
PNKP-228ENST00000637325 ARHGAP9Q9BRR9 750 aa13.45□□□□□ -0.26
PNKP-228ENST00000637325 TSSK1BQ9BXA7 367 aa13.45□□□□□ -0.26
PNKP-228ENST00000637325 ULBP3Q9BZM4 244 aa13.45□□□□□ -0.26
PNKP-228ENST00000637325 IL22Q9GZX6 179 aa13.45□□□□□ -0.26
PNKP-228ENST00000637325 OR52A5Q9H2C5 316 aa13.45□□□□□ -0.26
PNKP-228ENST00000637325 SRMSQ9H3Y6 488 aa13.45□□□□□ -0.26
PNKP-228ENST00000637325 MVB12BQ9H7P6 319 aa13.45□□□□□ -0.26
PNKP-228ENST00000637325 PDE7BQ9NP56 450 aa13.45□□□□□ -0.26
PNKP-228ENST00000637325 CHRAC1Q9NRG0 131 aa13.45□□□□□ -0.26
PNKP-228ENST00000637325 CATSPERZQ9NTU4 200 aa13.45□□□□□ -0.26
PNKP-228ENST00000637325 PILRAQ9UKJ1 303 aa13.45□□□□□ -0.26
PNKP-228ENST00000637325 TTC7AQ9ULT0 858 aaPredicted RBP13.45□□□□□ -0.26
PNKP-228ENST00000637325 PCDHGA4Q9Y5G9 962 aa13.45□□□□□ -0.26
PNKP-228ENST00000637325 IGHV5-51A0A0C4DH38 117 aa13.44□□□□□ -0.26
PNKP-228ENST00000637325 GSAPA4D1B5 854 aa13.44□□□□□ -0.26
PNKP-228ENST00000637325 TLCD2A6NGC4 264 aa13.44□□□□□ -0.26
PNKP-228ENST00000637325 OR1I1O60431 355 aa13.44□□□□□ -0.26
PNKP-228ENST00000637325 KRT14P02533 472 aa13.44□□□□□ -0.26
PNKP-228ENST00000637325 PRB1P04280 392 aa13.44□□□□□ -0.26
PNKP-228ENST00000637325 LIFP15018 202 aa13.44□□□□□ -0.26
PNKP-228ENST00000637325 POLR2CP19387 275 aaPredicted RBP13.44□□□□□ -0.26
PNKP-228ENST00000637325 TPSB2P20231 275 aa13.44□□□□□ -0.26
PNKP-228ENST00000637325 ARCN1P48444 511 aaKnown RBP13.44□□□□□ -0.26
PNKP-228ENST00000637325 CDK16Q00536 496 aa13.44□□□□□ -0.26
PNKP-228ENST00000637325 ACVR1Q04771 509 aa13.44□□□□□ -0.26
PNKP-228ENST00000637325 C19orf57Q0VDD7 668 aa13.44□□□□□ -0.26
PNKP-228ENST00000637325 BOP1Q14137 746 aaKnown RBP13.44□□□□□ -0.26
PNKP-228ENST00000637325 TPSAB1Q15661 275 aa13.44□□□□□ -0.26
PNKP-228ENST00000637325 AARS2Q5JTZ9 985 aaKnown RBP13.44□□□□□ -0.26
PNKP-228ENST00000637325 PPP1R3BQ86XI6 285 aa13.44□□□□□ -0.26
PNKP-228ENST00000637325 KMT5CQ86Y97 462 aa13.44□□□□□ -0.26
PNKP-228ENST00000637325 SLC35F6Q8N357 371 aa13.44□□□□□ -0.26
PNKP-228ENST00000637325 ESX1Q8N693 406 aa13.44□□□□□ -0.26
PNKP-228ENST00000637325 OTUD6BQ8N6M0 293 aa13.44□□□□□ -0.26
PNKP-228ENST00000637325 TTC9Q92623 222 aa13.44□□□□□ -0.26
PNKP-228ENST00000637325 RNF31Q96EP0 1072 aa13.44□□□□□ -0.26
PNKP-228ENST00000637325 MS4A14Q96JA4 679 aa13.44□□□□□ -0.26
PNKP-228ENST00000637325 EFHD1Q9BUP0 239 aa13.44□□□□□ -0.26
PNKP-228ENST00000637325 AP1M1Q9BXS5 423 aa13.44□□□□□ -0.26
PNKP-228ENST00000637325 GPN2Q9H9Y4 310 aaPredicted RBP13.44□□□□□ -0.26
PNKP-228ENST00000637325 RARRES3Q9UL19 164 aa13.44□□□□□ -0.26
PNKP-228ENST00000637325 TMEM184BQ9Y519 407 aaPredicted RBP13.44□□□□□ -0.26
PNKP-228ENST00000637325 ANKRD12Q6UB98 2062 aa13.43□□□□□ -0.26
PNKP-228ENST00000637325 MATN2O00339 956 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms