RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 PKP4Q99569 1192 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 DNAAF2Q9NVR5 837 aaKnown RBP17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 RAPGEFL1Q9UHV5 662 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 TLX3O43711 291 aaPredicted RBP17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 GATBO75879 557 aaKnown RBP17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 CAPGP40121 348 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 ARFRP1Q13795 201 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 DENND5AQ6IQ26 1287 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 SAT2Q96F10 170 aaPredicted RBP17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 TRAPPC9Q96Q05 1148 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 PCDHGB5Q9Y5G0 923 aa17.61■□□□□ 0.41
CACNA1A-227ENST00000636549 NOBOXO60393 691 aa17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 ALPIP09923 528 aa17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 TUBG1P23258 451 aa17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 CCND3P30281 292 aaPredicted RBP17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 MARCKSL1P49006 195 aa17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 SLC9B1Q4ZJI4 515 aa17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 KLHL6Q8WZ60 621 aa17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 EHD4Q9H223 541 aa17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 PRNPP04156 253 aa17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 ACSL1P33121 698 aa17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 C5orf22Q49AR2 442 aa17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 HSDL2Q6YN16 418 aa17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 ETNPPLQ8TBG4 499 aa17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 BAP1Q92560 729 aa17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 CCNL2Q96S94 520 aaPredicted RBP17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 ERVW-1Q9UQF0 538 aa17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 TNFRSF11BO00300 401 aa17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 VPS26BQ4G0F5 336 aa17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 BROXQ5VW32 411 aa17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 TMPRSS11AQ6ZMR5 421 aa17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 EIF1ADQ8N9N8 165 aaKnown RBP17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 JOSD2Q8TAC2 188 aa17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 NXNL1Q96CM4 212 aa17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 MSLNLQ96KJ4 702 aa17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 PXDNLA1KZ92 1463 aa17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 FAM149AA5PLN7 773 aa17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 SLC38A8A6NNN8 435 aa17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 TMEM150CB9EJG8 249 aa17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 TRMT5Q32P41 509 aaKnown RBP17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 PAPD7Q5XG87 772 aaKnown RBP17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 GRASPQ7Z6J2 395 aaPredicted RBP17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 ADAMTSL2Q86TH1 951 aa17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 SYVN1Q86TM6 617 aa17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 DEPDC4Q8N2C3 294 aa17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 LRRN4CLQ8ND94 238 aa17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 PXYLP1Q8TE99 480 aa17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 SIPA1Q96FS4 1042 aa17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 PCDHGC5Q9Y5F6 944 aa17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 TBX18O95935 607 aa17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 ELP6Q0PNE2 266 aa17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 ZNF101Q8IZC7 436 aa17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 TMEM68Q96MH6 324 aa17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 RIMS1Q86UR5 1692 aaKnown RBP17.6■□□□□ 0.41
CACNA1A-227ENST00000636549 AP5Z1O43299 807 aa17.59■□□□□ 0.41
CACNA1A-227ENST00000636549 FGF19O95750 216 aa17.59■□□□□ 0.41
CACNA1A-227ENST00000636549 ITGA2BP08514 1039 aa17.59■□□□□ 0.41
CACNA1A-227ENST00000636549 CFHP08603 1231 aa17.59■□□□□ 0.41
CACNA1A-227ENST00000636549 VARSP26640 1264 aaKnown RBP17.59■□□□□ 0.41
CACNA1A-227ENST00000636549 LIPEQ05469 1076 aa17.59■□□□□ 0.41
CACNA1A-227ENST00000636549 ADRM1Q16186 407 aa17.59■□□□□ 0.41
CACNA1A-227ENST00000636549 CKAP2Q8WWK9 683 aa17.59■□□□□ 0.41
CACNA1A-227ENST00000636549 RNF157Q96PX1 679 aa17.59■□□□□ 0.41
CACNA1A-227ENST00000636549 FEM1AQ9BSK4 669 aa17.59■□□□□ 0.41
CACNA1A-227ENST00000636549 ADGRB3O60242 1522 aa17.59■□□□□ 0.41
CACNA1A-227ENST00000636549 DCST1Q5T197 706 aa17.59■□□□□ 0.41
CACNA1A-227ENST00000636549 SLC51AQ86UW1 340 aa17.59■□□□□ 0.41
CACNA1A-227ENST00000636549 ARL10Q8N8L6 244 aa17.59■□□□□ 0.41
CACNA1A-227ENST00000636549 PYCR2Q96C36 320 aa17.59■□□□□ 0.41
CACNA1A-227ENST00000636549 MRPL57Q9BQC6 102 aaKnown RBP17.59■□□□□ 0.41
CACNA1A-227ENST00000636549 VWA5B1Q5TIE3 1220 aa17.59■□□□□ 0.41
CACNA1A-227ENST00000636549 PHF12Q96QT6 1004 aa17.59■□□□□ 0.41
CACNA1A-227ENST00000636549 IL21RQ9HBE5 538 aa17.59■□□□□ 0.41
CACNA1A-227ENST00000636549 HSPA12AO43301 675 aa17.59■□□□□ 0.41
CACNA1A-227ENST00000636549 PAPSS2O95340 614 aaPredicted RBP17.59■□□□□ 0.41
CACNA1A-227ENST00000636549 HSD3B1P14060 373 aa17.59■□□□□ 0.41
CACNA1A-227ENST00000636549 RPP38P78345 283 aaKnown RBP17.59■□□□□ 0.41
CACNA1A-227ENST00000636549 CREB5Q02930 508 aa17.59■□□□□ 0.41
CACNA1A-227ENST00000636549 GXYLT1Q4G148 440 aa17.59■□□□□ 0.41
CACNA1A-227ENST00000636549 SH3RF2Q8TEC5 729 aa17.59■□□□□ 0.41
CACNA1A-227ENST00000636549 ASPNQ9BXN1 380 aa17.59■□□□□ 0.41
CACNA1A-227ENST00000636549 TCRBV21S2A2A0A5A6 115 aa17.59■□□□□ 0.41
CACNA1A-227ENST00000636549 CH25HO95992 272 aa17.59■□□□□ 0.41
CACNA1A-227ENST00000636549 GOT2P00505 430 aaKnown RBP17.59■□□□□ 0.41
CACNA1A-227ENST00000636549 GATMP50440 423 aa17.59■□□□□ 0.41
CACNA1A-227ENST00000636549 TAS2R40P59535 323 aa17.59■□□□□ 0.41
CACNA1A-227ENST00000636549 SGIP1Q9BQI5 828 aa17.59■□□□□ 0.41
CACNA1A-227ENST00000636549 FZD3Q9NPG1 666 aa17.59■□□□□ 0.41
CACNA1A-227ENST00000636549 KCTD5Q9NXV2 234 aa17.59■□□□□ 0.41
CACNA1A-227ENST00000636549 TBC1D14Q9P2M4 693 aa17.59■□□□□ 0.41
CACNA1A-227ENST00000636549 TRAFD1O14545 582 aaPredicted RBP17.58■□□□□ 0.41
CACNA1A-227ENST00000636549 APOC1P02654 83 aa17.58■□□□□ 0.41
CACNA1A-227ENST00000636549 HCKP08631 526 aa17.58■□□□□ 0.41
CACNA1A-227ENST00000636549 TMEM11P17152 192 aa17.58■□□□□ 0.41
CACNA1A-227ENST00000636549 ADSSP30520 456 aa17.58■□□□□ 0.41
CACNA1A-227ENST00000636549 RPL3P39023 403 aaKnown RBP17.58■□□□□ 0.41
CACNA1A-227ENST00000636549 OR12D2P58182 307 aa17.58■□□□□ 0.41
CACNA1A-227ENST00000636549 C1orf189Q5VU69 101 aa17.58■□□□□ 0.41
CACNA1A-227ENST00000636549 DNAJA4Q8WW22 397 aaPredicted RBP17.58■□□□□ 0.41
CACNA1A-227ENST00000636549 TNFRSF25Q93038 417 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms