RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 SCNN1AP37088 669 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 CLCA4Q14CN2 919 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 KLHL22Q53GT1 634 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 AKAP14Q86UN6 197 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 LAPTM4BQ86VI4 370 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 ARHGAP12Q8IWW6 846 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 ZNF101Q8IZC7 436 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 CEP295NLQ96MC4 621 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 ZNF350Q9GZX5 532 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 ELAC1Q9H777 363 aaKnown RBP5.48□□□□□ -1.53
SCN1A-209ENST00000635750 EDARQ9UNE0 448 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 SAGE2PA6NJ88 616 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 DUXAA6NLW8 204 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 E7EQ34 232 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 TNFRSF11BO00300 401 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 RTCAO00442 366 aaKnown RBP5.48□□□□□ -1.53
SCN1A-209ENST00000635750 DNAJA2O60884 412 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 PAGE1O75459 146 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 GLI1P08151 1106 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 PKMP14618 531 aaKnown RBP5.48□□□□□ -1.53
SCN1A-209ENST00000635750 NAE1Q13564 534 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 SLC1A5Q15758 541 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 MLIPQ5VWP3 458 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 PAOXQ6QHF9 649 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 SCIMPQ6UWF3 145 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 AMZ2Q86W34 360 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 PROKR2Q8NFJ6 384 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 OR10Q1Q8NGQ4 319 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 PCDH19Q8TAB3 1148 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 GPR152Q8TDT2 470 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 PYDC1Q8WXC3 89 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 PLD4Q96BZ4 506 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 ZBTB10Q96DT7 871 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 CMKLR1Q99788 373 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 ORAI3Q9BRQ5 295 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 IFT27Q9BW83 186 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.48□□□□□ -1.53
SCN1A-209ENST00000635750 OR10A4Q9H209 315 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 CD248Q9HCU0 757 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 AASSQ9UDR5 926 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 RAP2CQ9Y3L5 183 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 C2CD2Q9Y426 696 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 PXDNLA1KZ92 1463 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 BORCS7-ASMTA0A0B4J1R7 106 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 C2orf72A6NCS6 295 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 HHLA1C9JL84 531 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 ITGA10O75578 1167 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 KRT36O76013 467 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 FARS2O95363 451 aaKnown RBP5.48□□□□□ -1.53
SCN1A-209ENST00000635750 ATP6V1G2O95670 118 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 ASLP04424 464 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 PIRTP0C851 137 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 ENTPD1P49961 510 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 POLR2HP52434 150 aaKnown RBP5.48□□□□□ -1.53
SCN1A-209ENST00000635750 CLRN1P58418 232 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 FPGSQ05932 587 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 PLGLAQ15195 96 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 TYSND1Q2T9J0 566 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 SLC24A5Q71RS6 500 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 PLPPR4Q7Z2D5 763 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 SCGB1C1Q8TD33 95 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 WFIKKN2Q8TEU8 576 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 UFD1Q92890 307 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 SLC5A5Q92911 643 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 AKT1S1Q96B36 256 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 BORCS7Q96B45 105 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 OSBPL2Q9H1P3 480 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 OR51V1Q9H2C8 321 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 A0A1W2PQH9 124 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 A8MU76 341 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 ADAMDEC1O15204 470 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 HCKP08631 526 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 RYKP34925 604 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 ANTXR2P58335 489 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 GRIK2Q13002 908 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 ITGB3BPQ13352 177 aaPredicted RBP5.48□□□□□ -1.53
SCN1A-209ENST00000635750 NIPAL1Q6NVV3 410 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 ENPP7Q6UWV6 458 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 ARSKQ6UWY0 536 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 PAMR1Q6UXH9 720 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 TMEM126BQ8IUX1 230 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 MCFD2Q8NI22 146 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 PPTC7Q8NI37 304 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 FBXO25Q8TCJ0 367 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 FAM83DQ9H4H8 585 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 PARPBPQ9NWS1 579 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 MTMR10Q9NXD2 777 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 EIF3KQ9UBQ5 218 aaKnown RBP5.48□□□□□ -1.53
SCN1A-209ENST00000635750 IL36AQ9UHA7 158 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 NENFQ9UMX5 172 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 BACE2Q9Y5Z0 518 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 KANTRA0A1W2PQU2 76 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 HTR3EA5X5Y0 456 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 A8MUI8 341 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 AKAP3O75969 853 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 HTR7P34969 479 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 MATKP42679 507 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 KCNJ2P63252 427 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 RHEBQ15382 184 aa5.48□□□□□ -1.53
SCN1A-209ENST00000635750 C16orf46Q6P387 395 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms