RNA–Protein interactions for RNA: ENST00000633813.1

LINC00254-202, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-202ENST00000633813 C4orf46Q504U0 113 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 TEX35Q5T0J7 233 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 HECTD3Q5T447 861 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 PLPP4Q5VZY2 271 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 KIRREL2Q6UWL6 708 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 SERPINA13PQ6UXR4 307 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 BBS12Q6ZW61 710 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 ANKS1BQ7Z6G8 1248 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 TAC4Q86UU9 113 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 ELMOD1Q8N336 334 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 CCDC185Q8N715 623 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 PRELID2Q8N945 189 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 CCDC26Q8TAB7 109 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 CASP10Q92851 521 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 MAGOHBQ96A72 148 aaKnown RBP5.7□□□□□ -1.5
LINC00254-202ENST00000633813 FAF2Q96CS3 445 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 ZDHHC12Q96GR4 267 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 SLC39A13Q96H72 371 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 C1orf74Q96LT6 269 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 SERPINB11Q96P15 392 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 RNF157Q96PX1 679 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 KRT12Q99456 494 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 HERPUD2Q9BSE4 406 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 HEMGNQ9BXL5 484 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 CALN1Q9BXU9 219 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 FRMD8P1Q9BZ68 369 aaPredicted RBP5.7□□□□□ -1.5
LINC00254-202ENST00000633813 TKTL2Q9H0I9 626 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 LMAN2LQ9H0V9 348 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 DHX35Q9H5Z1 703 aaKnown RBP5.7□□□□□ -1.5
LINC00254-202ENST00000633813 SLC28A3Q9HAS3 691 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 MTMR10Q9NXD2 777 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 ARHGEF38Q9NXL2 777 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 COX16Q9P0S2 106 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 STEAP1Q9UHE8 339 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 PCYOX1Q9UHG3 505 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 SLC12A6Q9UHW9 1150 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 NLRC5Q86WI3 1866 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 PTPRSQ13332 1948 aa5.7□□□□□ -1.5
LINC00254-202ENST00000633813 CLCA1A8K7I4 914 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 KCNU1A8MYU2 1149 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 POC1B-GALNT4F8VUJ3 575 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 APOC4-APOC2K7ER74 178 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 DYNC1I1O14576 645 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 AREL1O15033 823 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 CST8O60676 142 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 FGF19O95750 216 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 TBX18O95935 607 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 APOC2P02655 101 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 MCM3P25205 808 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 HTR7P34969 479 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 COILP38432 576 aaPredicted RBP5.69□□□□□ -1.5
LINC00254-202ENST00000633813 STT3AP46977 705 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 NR2C2P49116 596 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 FNTAP49354 379 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 RGS19P49795 217 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 COG7P83436 770 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 TFF2Q03403 129 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 SEMA3BQ13214 749 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 DHX34Q14147 1143 aaKnown RBP5.69□□□□□ -1.5
LINC00254-202ENST00000633813 KCNAB1Q14722 419 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 CA9Q16790 459 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 ANKRD20A8PQ5CZ79 823 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 PPP6R3Q5H9R7 873 aaPredicted RBP5.69□□□□□ -1.5
LINC00254-202ENST00000633813 PPM1LQ5SGD2 360 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 C10orf120Q5SQS8 335 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 C8orf74Q6P047 294 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 CCDC137Q6PK04 289 aaKnown RBP5.69□□□□□ -1.5
LINC00254-202ENST00000633813 BZW1Q7L1Q6 419 aaKnown RBP5.69□□□□□ -1.5
LINC00254-202ENST00000633813 RFX6Q8HWS3 928 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 LIX1LQ8IVB5 337 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 KLHL7Q8IXQ5 586 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 CCDC105Q8IYK2 499 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 TDHQ8IZJ6 230 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 GALNT4Q8N4A0 578 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 PLD5Q8N7P1 536 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.69□□□□□ -1.5
LINC00254-202ENST00000633813 SLC22A17Q8WUG5 538 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 RUBCNQ92622 972 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 SLCO2A1Q92959 643 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 VOPP1Q96AW1 172 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 VPS50Q96JG6 964 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 BTN2A3PQ96KV6 586 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 CSPG4P5Q96PW8 444 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 FYTTD1Q96QD9 318 aaKnown RBP5.69□□□□□ -1.5
LINC00254-202ENST00000633813 MACROD1Q9BQ69 325 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 LRRC1Q9BTT6 524 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 DCLK3Q9C098 648 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 SEMA4CQ9C0C4 833 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 DDX47Q9H0S4 455 aaKnown RBP5.69□□□□□ -1.5
LINC00254-202ENST00000633813 GPATCH2LQ9NWQ4 482 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 CWC15Q9P013 229 aaKnown RBP5.69□□□□□ -1.5
LINC00254-202ENST00000633813 MGAT4CQ9UBM8 478 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 OR12D3Q9UGF7 316 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.69□□□□□ -1.5
LINC00254-202ENST00000633813 AMACRQ9UHK6 382 aa5.69□□□□□ -1.5
LINC00254-202ENST00000633813 HBS1LQ9Y450 684 aaKnown RBP5.69□□□□□ -1.5
LINC00254-202ENST00000633813 V9GYY5 206 aaPredicted RBP5.69□□□□□ -1.5
LINC00254-202ENST00000633813 COL4A4P53420 1690 aaPredicted RBP5.69□□□□□ -1.5
LINC00254-202ENST00000633813 PTPRDP23468 1912 aa5.68□□□□□ -1.5
LINC00254-202ENST00000633813 A8MVJ9 347 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms