RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 SNX33Q8WV41 574 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 TSEN15Q8WW01 171 aaKnown RBP12.63□□□□□ -0.39
SCN8A-209ENST00000627620 CENPNQ96H22 339 aaPredicted RBP12.63□□□□□ -0.39
SCN8A-209ENST00000627620 HAPLN3Q96S86 360 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 NUSAP1Q9BXS6 441 aaKnown RBP12.63□□□□□ -0.39
SCN8A-209ENST00000627620 OR2AG1Q9H205 316 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 TULP3O75386 442 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 ANGPTL1O95841 491 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 SP2Q02086 613 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 SEMG2Q02383 582 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 BANPQ8N9N5 519 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 SCLYQ96I15 445 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 CALML5Q9NZT1 146 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 HMGXB4Q9UGU5 601 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 DHRS7Q9Y394 339 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 hCG_2039718K7EN88 272 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 ACRP10323 421 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 FAUP35544 74 aaKnown RBP12.63□□□□□ -0.39
SCN8A-209ENST00000627620 CHRNA4P43681 627 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 PLA2G16P53816 162 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 RBBP4Q09028 425 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 MYBPC3Q14896 1274 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 LRTOMTQ8WZ04 291 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 TP53INP1Q96A56 240 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 B3GALT6Q96L58 329 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 C12orf66Q96MD2 445 aa12.63□□□□□ -0.39
SCN8A-209ENST00000627620 TFECO14948 347 aaPredicted RBP12.62□□□□□ -0.39
SCN8A-209ENST00000627620 GNAZP19086 355 aa12.62□□□□□ -0.39
SCN8A-209ENST00000627620 IL18Q14116 193 aa12.62□□□□□ -0.39
SCN8A-209ENST00000627620 RFTN1Q14699 578 aaPredicted RBP12.62□□□□□ -0.39
SCN8A-209ENST00000627620 LACTB2Q53H82 288 aaPredicted RBP12.62□□□□□ -0.39
SCN8A-209ENST00000627620 SYPL2Q5VXT5 272 aa12.62□□□□□ -0.39
SCN8A-209ENST00000627620 AHSA2Q719I0 299 aa12.62□□□□□ -0.39
SCN8A-209ENST00000627620 TMEM192Q8IY95 271 aa12.62□□□□□ -0.39
SCN8A-209ENST00000627620 PJA1Q8NG27 643 aa12.62□□□□□ -0.39
SCN8A-209ENST00000627620 C12orf42Q96LP6 360 aa12.62□□□□□ -0.39
SCN8A-209ENST00000627620 SLC38A3Q99624 504 aa12.62□□□□□ -0.39
SCN8A-209ENST00000627620 IL12RB2Q99665 862 aa12.62□□□□□ -0.39
SCN8A-209ENST00000627620 ABCB9Q9NP78 766 aa12.62□□□□□ -0.39
SCN8A-209ENST00000627620 COQ4Q9Y3A0 265 aa12.62□□□□□ -0.39
SCN8A-209ENST00000627620 TESMINQ9Y4I5 508 aa12.62□□□□□ -0.39
SCN8A-209ENST00000627620 IRAK2O43187 625 aa12.62□□□□□ -0.39
SCN8A-209ENST00000627620 CCNB2O95067 398 aa12.62□□□□□ -0.39
SCN8A-209ENST00000627620 TBX18O95935 607 aa12.62□□□□□ -0.39
SCN8A-209ENST00000627620 RLN1P04808 185 aa12.62□□□□□ -0.39
SCN8A-209ENST00000627620 LYNP07948 512 aa12.62□□□□□ -0.39
SCN8A-209ENST00000627620 PSMA1P25786 263 aaKnown RBP12.62□□□□□ -0.39
SCN8A-209ENST00000627620 RPS14P62263 151 aaKnown RBP12.62□□□□□ -0.39
SCN8A-209ENST00000627620 CARD16Q5EG05 197 aa12.62□□□□□ -0.39
SCN8A-209ENST00000627620 RANBP3LQ86VV4 465 aaPredicted RBP12.62□□□□□ -0.39
SCN8A-209ENST00000627620 GIPC3Q8TF64 312 aa12.62□□□□□ -0.39
SCN8A-209ENST00000627620 KLK6Q92876 244 aa12.62□□□□□ -0.39
SCN8A-209ENST00000627620 RNF31Q96EP0 1072 aa12.62□□□□□ -0.39
SCN8A-209ENST00000627620 GRHL1Q9NZI5 618 aa12.62□□□□□ -0.39
SCN8A-209ENST00000627620 WRAP73Q9P2S5 460 aaPredicted RBP12.62□□□□□ -0.39
SCN8A-209ENST00000627620 WBP11Q9Y2W2 641 aaKnown RBP12.62□□□□□ -0.39
SCN8A-209ENST00000627620 STARP49675 285 aa12.62□□□□□ -0.39
SCN8A-209ENST00000627620 CYP2U1Q7Z449 544 aa12.62□□□□□ -0.39
SCN8A-209ENST00000627620 GTPBP3Q969Y2 492 aaKnown RBP12.62□□□□□ -0.39
SCN8A-209ENST00000627620 C1QTNF1Q9BXJ1 281 aa12.62□□□□□ -0.39
SCN8A-209ENST00000627620 PRMT3O60678 531 aa12.62□□□□□ -0.39
SCN8A-209ENST00000627620 ARF5P84085 180 aa12.62□□□□□ -0.39
SCN8A-209ENST00000627620 GRSF1Q12849 480 aaKnown RBP eCLIP12.62□□□□□ -0.39
SCN8A-209ENST00000627620 FAM174BQ3ZCQ3 159 aa12.62□□□□□ -0.39
SCN8A-209ENST00000627620 FBXO42Q6P3S6 717 aa12.62□□□□□ -0.39
SCN8A-209ENST00000627620 LRP10Q7Z4F1 713 aa12.62□□□□□ -0.39
SCN8A-209ENST00000627620 HDDC3Q8N4P3 179 aa12.62□□□□□ -0.39
SCN8A-209ENST00000627620 FCRL5Q96RD9 977 aa12.62□□□□□ -0.39
SCN8A-209ENST00000627620 NKIRAS2Q9NYR9 191 aa12.62□□□□□ -0.39
SCN8A-209ENST00000627620 RUVBL1Q9Y265 456 aaKnown RBP12.62□□□□□ -0.39
SCN8A-209ENST00000627620 BTN3A3O00478 584 aa12.61□□□□□ -0.39
SCN8A-209ENST00000627620 CXCR6O00574 342 aa12.61□□□□□ -0.39
SCN8A-209ENST00000627620 IFNA6P05013 189 aa12.61□□□□□ -0.39
SCN8A-209ENST00000627620 BCAP31P51572 246 aa12.61□□□□□ -0.39
SCN8A-209ENST00000627620 RPS24P62847 133 aaKnown RBP12.61□□□□□ -0.39
SCN8A-209ENST00000627620 CAMK1Q14012 370 aa12.61□□□□□ -0.39
SCN8A-209ENST00000627620 CCL14Q16627 93 aa12.61□□□□□ -0.39
SCN8A-209ENST00000627620 SH3RF2Q8TEC5 729 aa12.61□□□□□ -0.39
SCN8A-209ENST00000627620 TLCD1Q96CP7 247 aa12.61□□□□□ -0.39
SCN8A-209ENST00000627620 TAPBPLQ9BX59 468 aa12.61□□□□□ -0.39
SCN8A-209ENST00000627620 TRIM39Q9HCM9 518 aa12.61□□□□□ -0.39
SCN8A-209ENST00000627620 NRP1O14786 923 aa12.61□□□□□ -0.39
SCN8A-209ENST00000627620 POU2F1P14859 743 aa12.61□□□□□ -0.39
SCN8A-209ENST00000627620 ALDH4A1P30038 563 aa12.61□□□□□ -0.39
SCN8A-209ENST00000627620 PRKD1Q15139 912 aaPredicted RBP12.61□□□□□ -0.39
SCN8A-209ENST00000627620 NIPA2Q8N8Q9 360 aa12.61□□□□□ -0.39
SCN8A-209ENST00000627620 OR13C4Q8NGS5 318 aa12.61□□□□□ -0.39
SCN8A-209ENST00000627620 ZNF516Q92618 1163 aa12.61□□□□□ -0.39
SCN8A-209ENST00000627620 MRPS17Q9Y2R5 130 aaKnown RBP12.61□□□□□ -0.39
SCN8A-209ENST00000627620 A0A1W2PRU2 124 aa12.61□□□□□ -0.39
SCN8A-209ENST00000627620 PI15O43692 258 aa12.61□□□□□ -0.39
SCN8A-209ENST00000627620 B3GALT2O43825 422 aa12.61□□□□□ -0.39
SCN8A-209ENST00000627620 NME6O75414 186 aaPredicted RBP12.61□□□□□ -0.39
SCN8A-209ENST00000627620 RALGPS1Q5JS13 557 aa12.61□□□□□ -0.39
SCN8A-209ENST00000627620 TPGS2Q68CL5 300 aa12.61□□□□□ -0.39
SCN8A-209ENST00000627620 SLC30A6Q6NXT4 461 aa12.61□□□□□ -0.39
SCN8A-209ENST00000627620 MEIOBQ8N635 442 aa12.61□□□□□ -0.39
SCN8A-209ENST00000627620 ZNF483Q8TF39 744 aaPredicted RBP12.61□□□□□ -0.39
SCN8A-209ENST00000627620 SLC13A3Q8WWT9 602 aa12.61□□□□□ -0.39
SCN8A-209ENST00000627620 PIGKQ92643 395 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms