RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 DUSP3P51452 185 aaPredicted RBP14.41□□□□□ -0.1
PNKP-221ENST00000627317 PMS2P54278 862 aa14.41□□□□□ -0.1
PNKP-221ENST00000627317 BIRC2Q13490 618 aa14.41□□□□□ -0.1
PNKP-221ENST00000627317 NAB1Q13506 487 aa14.41□□□□□ -0.1
PNKP-221ENST00000627317 NR0B2Q15466 257 aa14.41□□□□□ -0.1
PNKP-221ENST00000627317 KBTBD12Q3ZCT8 623 aa14.41□□□□□ -0.1
PNKP-221ENST00000627317 PERM1Q5SV97 790 aa14.41□□□□□ -0.1
PNKP-221ENST00000627317 WDR93Q6P2C0 686 aa14.41□□□□□ -0.1
PNKP-221ENST00000627317 PPM1NQ8N819 430 aa14.41□□□□□ -0.1
PNKP-221ENST00000627317 LKAAEAR1Q8TD35 194 aa14.41□□□□□ -0.1
PNKP-221ENST00000627317 TMEM159Q96B96 161 aa14.41□□□□□ -0.1
PNKP-221ENST00000627317 FAM136AQ96C01 138 aa14.41□□□□□ -0.1
PNKP-221ENST00000627317 ATXN7L3BQ96GX2 97 aa14.41□□□□□ -0.1
PNKP-221ENST00000627317 AARSD1Q9BTE6 412 aaKnown RBP14.41□□□□□ -0.1
PNKP-221ENST00000627317 PRDM8Q9NQV8 689 aa14.41□□□□□ -0.1
PNKP-221ENST00000627317 SMYD2Q9NRG4 433 aa14.41□□□□□ -0.1
PNKP-221ENST00000627317 ACSL5Q9ULC5 683 aa14.41□□□□□ -0.1
PNKP-221ENST00000627317 CORO1CQ9ULV4 474 aaPredicted RBP14.41□□□□□ -0.1
PNKP-221ENST00000627317 CLCA2Q9UQC9 943 aa14.41□□□□□ -0.1
PNKP-221ENST00000627317 PSAT1Q9Y617 370 aa14.41□□□□□ -0.1
PNKP-221ENST00000627317 A6NCN8 305 aa14.4□□□□□ -0.1
PNKP-221ENST00000627317 CXorf49A8MYA2 514 aaPredicted RBP14.4□□□□□ -0.1
PNKP-221ENST00000627317 KPNA5O15131 536 aa14.4□□□□□ -0.1
PNKP-221ENST00000627317 CASC3O15234 703 aaKnown RBP14.4□□□□□ -0.1
PNKP-221ENST00000627317 NOBOXO60393 691 aa14.4□□□□□ -0.1
PNKP-221ENST00000627317 PIAS1O75925 651 aa14.4□□□□□ -0.1
PNKP-221ENST00000627317 EML2O95834 649 aa14.4□□□□□ -0.1
PNKP-221ENST00000627317 MT-CO3P00414 261 aa14.4□□□□□ -0.1
PNKP-221ENST00000627317 AHSGP02765 367 aa14.4□□□□□ -0.1
PNKP-221ENST00000627317 APOA4P06727 396 aa14.4□□□□□ -0.1
PNKP-221ENST00000627317 CHRM3P20309 590 aa14.4□□□□□ -0.1
PNKP-221ENST00000627317 GABRB3P28472 473 aa14.4□□□□□ -0.1
PNKP-221ENST00000627317 PREPP48147 710 aa14.4□□□□□ -0.1
PNKP-221ENST00000627317 PDX1P52945 283 aa14.4□□□□□ -0.1
PNKP-221ENST00000627317 CSE1LP55060 971 aaKnown RBP14.4□□□□□ -0.1
PNKP-221ENST00000627317 PLOD1Q02809 727 aaPredicted RBP14.4□□□□□ -0.1
PNKP-221ENST00000627317 ILF2Q12905 390 aaKnown RBP14.4□□□□□ -0.1
PNKP-221ENST00000627317 RPA4Q13156 261 aa14.4□□□□□ -0.1
PNKP-221ENST00000627317 RTP5Q14D33 572 aa14.4□□□□□ -0.1
PNKP-221ENST00000627317 EFTUD2Q15029 972 aaKnown RBP eCLIP14.4□□□□□ -0.17e-7■■■■■ 37.5
PNKP-221ENST00000627317 BRD3Q15059 726 aa14.4□□□□□ -0.1
PNKP-221ENST00000627317 C14orf28Q4W4Y0 310 aa14.4□□□□□ -0.1
PNKP-221ENST00000627317 AGAP9Q5VTM2 703 aa14.4□□□□□ -0.1
PNKP-221ENST00000627317 METRNLQ641Q3 311 aa14.4□□□□□ -0.1
PNKP-221ENST00000627317 OGFOD3Q6PK18 319 aa14.4□□□□□ -0.1
PNKP-221ENST00000627317 WASH2PQ6VEQ5 465 aa14.4□□□□□ -0.1
PNKP-221ENST00000627317 OTOAQ7RTW8 1153 aa14.4□□□□□ -0.1
PNKP-221ENST00000627317 EFL1Q7Z2Z2 1120 aaKnown RBP14.4□□□□□ -0.1
PNKP-221ENST00000627317 TRIM48Q8IWZ4 208 aa14.4□□□□□ -0.1
PNKP-221ENST00000627317 LILRA3Q8N6C8 439 aaPredicted RBP14.4□□□□□ -0.1
PNKP-221ENST00000627317 GPATCH11Q8N954 259 aa14.4□□□□□ -0.1
PNKP-221ENST00000627317 GPR156Q8NFN8 814 aa14.4□□□□□ -0.1
PNKP-221ENST00000627317 MAPK15Q8TD08 544 aa14.4□□□□□ -0.1
PNKP-221ENST00000627317 SLC37A2Q8TED4 501 aa14.4□□□□□ -0.1
PNKP-221ENST00000627317 PATE1Q8WXA2 126 aa14.4□□□□□ -0.1
PNKP-221ENST00000627317 CYTH2Q99418 400 aa14.4□□□□□ -0.1
PNKP-221ENST00000627317 NDNQ99608 321 aa14.4□□□□□ -0.1
PNKP-221ENST00000627317 CPNE1Q99829 537 aa14.4□□□□□ -0.1
PNKP-221ENST00000627317 WWP1Q9H0M0 922 aa14.4□□□□□ -0.1
PNKP-221ENST00000627317 STN1Q9H668 368 aaKnown RBP14.4□□□□□ -0.1
PNKP-221ENST00000627317 CCDC86Q9H6F5 360 aaKnown RBP14.4□□□□□ -0.1
PNKP-221ENST00000627317 WASH6PQ9NQA3 447 aa14.4□□□□□ -0.1
PNKP-221ENST00000627317 PSMD13Q9UNM6 376 aa14.4□□□□□ -0.1
PNKP-221ENST00000627317 A0A087WUV0 522 aaPredicted RBP14.39□□□□□ -0.11
PNKP-221ENST00000627317 KIR2DS5A0A0G2JLQ3 304 aa14.39□□□□□ -0.11
PNKP-221ENST00000627317 A0A0G2JNG1 304 aa14.39□□□□□ -0.11
PNKP-221ENST00000627317 OR5K4A6NMS3 321 aa14.39□□□□□ -0.11
PNKP-221ENST00000627317 KIR2DS3K7RE56 304 aa14.39□□□□□ -0.11
PNKP-221ENST00000627317 IFRD1O00458 451 aaPredicted RBP14.39□□□□□ -0.11
PNKP-221ENST00000627317 VPS26AO75436 327 aa14.39□□□□□ -0.11
PNKP-221ENST00000627317 TUBBP07437 444 aa14.39□□□□□ -0.11
PNKP-221ENST00000627317 ABHD2P08910 425 aa14.39□□□□□ -0.11
PNKP-221ENST00000627317 AOAHP28039 575 aa14.39□□□□□ -0.11
PNKP-221ENST00000627317 CCR7P32248 378 aa14.39□□□□□ -0.11
PNKP-221ENST00000627317 GP5P40197 560 aa14.39□□□□□ -0.11
PNKP-221ENST00000627317 MAZP56270 477 aaKnown RBP14.39□□□□□ -0.11
PNKP-221ENST00000627317 CYP4F3Q08477 520 aa14.39□□□□□ -0.11
PNKP-221ENST00000627317 HSPA14Q0VDF9 509 aa14.39□□□□□ -0.11
PNKP-221ENST00000627317 KIR2DS5Q14953 304 aa14.39□□□□□ -0.11
PNKP-221ENST00000627317 ZNF658BQ4V348 819 aaPredicted RBP14.39□□□□□ -0.11
PNKP-221ENST00000627317 RBM20Q5T481 1227 aaKnown RBP14.39□□□□□ -0.11
PNKP-221ENST00000627317 UBAP2Q5T6F2 1119 aaKnown RBP14.39□□□□□ -0.11
PNKP-221ENST00000627317 ZNF549Q6P9A3 640 aa14.39□□□□□ -0.11
PNKP-221ENST00000627317 IYDQ6PHW0 289 aa14.39□□□□□ -0.11
PNKP-221ENST00000627317 NAPRTQ6XQN6 538 aa14.39□□□□□ -0.11
PNKP-221ENST00000627317 SFTPA2Q8IWL1 248 aa14.39□□□□□ -0.11
PNKP-221ENST00000627317 NAGSQ8N159 534 aa14.39□□□□□ -0.11
PNKP-221ENST00000627317 AVL9Q8NBF6 648 aa14.39□□□□□ -0.11
PNKP-221ENST00000627317 UHMK1Q8TAS1 419 aaKnown RBP14.39□□□□□ -0.11
PNKP-221ENST00000627317 ASZ1Q8WWH4 475 aa14.39□□□□□ -0.11
PNKP-221ENST00000627317 KCNJ9Q92806 393 aa14.39□□□□□ -0.11
PNKP-221ENST00000627317 NAT6Q93015 286 aa14.39□□□□□ -0.11
PNKP-221ENST00000627317 CXorf40BQ96DE9 158 aa14.39□□□□□ -0.11
PNKP-221ENST00000627317 NXPE2Q96DL1 559 aa14.39□□□□□ -0.11
PNKP-221ENST00000627317 PARD6BQ9BYG5 372 aa14.39□□□□□ -0.11
PNKP-221ENST00000627317 TXLNGYQ9BZA5 131 aa14.39□□□□□ -0.11
PNKP-221ENST00000627317 NRSN2Q9GZP1 204 aa14.39□□□□□ -0.11
PNKP-221ENST00000627317 RHOJQ9H4E5 214 aa14.39□□□□□ -0.11
PNKP-221ENST00000627317 ACSS3Q9H6R3 686 aa14.39□□□□□ -0.11
PNKP-221ENST00000627317 RABGEF1Q9UJ41 708 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms