RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 FAM81BQ96LP2 452 aa3.05□□□□□ -1.92
VBP1-204ENST00000625964 TREX2Q9BQ50 279 aaPredicted RBP3.05□□□□□ -1.92
VBP1-204ENST00000625964 PELI2Q9HAT8 420 aa3.05□□□□□ -1.92
VBP1-204ENST00000625964 INTS10Q9NVR2 710 aaKnown RBP3.05□□□□□ -1.92
VBP1-204ENST00000625964 SEC63Q9UGP8 760 aaKnown RBP3.05□□□□□ -1.92
VBP1-204ENST00000625964 KCNK7Q9Y2U2 307 aa3.05□□□□□ -1.92
VBP1-204ENST00000625964 A0A1W2PQ09 198 aa3.04□□□□□ -1.92
VBP1-204ENST00000625964 MED19A0JLT2 244 aaPredicted RBP3.04□□□□□ -1.92
VBP1-204ENST00000625964 A6NL46 340 aa3.04□□□□□ -1.92
VBP1-204ENST00000625964 AGAP14A8MT82 685 aa3.04□□□□□ -1.92
VBP1-204ENST00000625964 CSPG5O95196 566 aa3.04□□□□□ -1.92
VBP1-204ENST00000625964 ACP2P11117 423 aa3.04□□□□□ -1.92
VBP1-204ENST00000625964 VPREB1P12018 145 aa3.04□□□□□ -1.92
VBP1-204ENST00000625964 MAP2K2P36507 400 aa3.04□□□□□ -1.92
VBP1-204ENST00000625964 CDH11P55287 796 aa3.04□□□□□ -1.92
VBP1-204ENST00000625964 KRTAP10-8P60410 259 aa3.04□□□□□ -1.92
VBP1-204ENST00000625964 PPIGQ13427 754 aaKnown RBP eCLIP3.04□□□□□ -1.92
VBP1-204ENST00000625964 SIM2Q14190 667 aaPredicted RBP3.04□□□□□ -1.92
VBP1-204ENST00000625964 SLC1A5Q15758 541 aa3.04□□□□□ -1.92
VBP1-204ENST00000625964 DUSP28Q4G0W2 176 aa3.04□□□□□ -1.92
VBP1-204ENST00000625964 ITPRIPL1Q6GPH6 555 aa3.04□□□□□ -1.92
VBP1-204ENST00000625964 FAM109BQ6ICB4 259 aaPredicted RBP3.04□□□□□ -1.92
VBP1-204ENST00000625964 FAM53AQ6NSI3 398 aaPredicted RBP3.04□□□□□ -1.92
VBP1-204ENST00000625964 TMCO3Q6UWJ1 677 aa3.04□□□□□ -1.92
VBP1-204ENST00000625964 SH2D5Q6ZV89 423 aa3.04□□□□□ -1.92
VBP1-204ENST00000625964 APLFQ8IW19 511 aaPredicted RBP3.04□□□□□ -1.92
VBP1-204ENST00000625964 DNAJC22Q8N4W6 341 aa3.04□□□□□ -1.92
VBP1-204ENST00000625964 LRRC59Q96AG4 307 aaKnown RBP3.04□□□□□ -1.92
VBP1-204ENST00000625964 ANKRD9Q96BM1 317 aaPredicted RBP3.04□□□□□ -1.92
VBP1-204ENST00000625964 SLC47A1Q96FL8 570 aa3.04□□□□□ -1.92
VBP1-204ENST00000625964 LRR1Q96L50 414 aa3.04□□□□□ -1.92
VBP1-204ENST00000625964 ABHD6Q9BV23 337 aa3.04□□□□□ -1.92
VBP1-204ENST00000625964 MOV10L1Q9BXT6 1211 aaKnown RBP3.04□□□□□ -1.92
VBP1-204ENST00000625964 ARHGEF38Q9NXL2 777 aa3.04□□□□□ -1.92
VBP1-204ENST00000625964 COQ3Q9NZJ6 369 aa3.04□□□□□ -1.92
VBP1-204ENST00000625964 NPAP1Q9NZP6 1156 aa3.04□□□□□ -1.92
VBP1-204ENST00000625964 SUCLA2Q9P2R7 463 aaPredicted RBP3.04□□□□□ -1.92
VBP1-204ENST00000625964 HACL1Q9UJ83 578 aa3.04□□□□□ -1.92
VBP1-204ENST00000625964 VPS28Q9UK41 221 aa3.04□□□□□ -1.92
VBP1-204ENST00000625964 SLC7A7Q9UM01 511 aa3.04□□□□□ -1.92
VBP1-204ENST00000625964 PLAGL1Q9UM63 463 aa3.04□□□□□ -1.92
VBP1-204ENST00000625964 ELOVL7A1L3X0 281 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 MAGEB17A8MXT2 336 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 TO15178 435 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 TSPAN9O75954 239 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 CD48P09326 243 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 LIFP15018 202 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 HOXD13P35453 343 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 ARSEP51690 589 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 SNX16P57768 344 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 PMP22Q01453 160 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 CXCL9Q07325 125 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 MELKQ14680 651 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 PLEKHS1Q5SXH7 462 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 FAM205BPQ63HN1 556 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 ZNF790Q6PG37 636 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 CORO6Q6QEF8 472 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 MFSD6Q6ZSS7 791 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 HAUS6Q7Z4H7 955 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 RPAP2Q8IXW5 612 aaPredicted RBP3.03□□□□□ -1.92
VBP1-204ENST00000625964 ADAD2Q8NCV1 583 aaKnown RBP3.03□□□□□ -1.92
VBP1-204ENST00000625964 WDR20Q8TBZ3 569 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 TMEM143Q96AN5 459 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 ERLEC1Q96DZ1 483 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 PAFAH2Q99487 392 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 TRAF4Q9BUZ4 470 aaPredicted RBP3.03□□□□□ -1.92
VBP1-204ENST00000625964 GHITMQ9H3K2 345 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 TBC1D22BQ9NU19 505 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 LARSQ9P2J5 1176 aaKnown RBP3.03□□□□□ -1.92
VBP1-204ENST00000625964 ADD3Q9UEY8 706 aaKnown RBP3.03□□□□□ -1.92
VBP1-204ENST00000625964 TBC1D29Q9UFV1 150 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 KCNJ14Q9UNX9 436 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 ZNF148Q9UQR1 794 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 RABGAP1Q9Y3P9 1069 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.03□□□□□ -1.92
VBP1-204ENST00000625964 GREB1LQ9C091 1923 aaPredicted RBP3.03□□□□□ -1.92
VBP1-204ENST00000625964 STK36Q9NRP7 1315 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 SLC22A2O15244 555 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 PAPSS1O43252 624 aaPredicted RBP3.03□□□□□ -1.92
VBP1-204ENST00000625964 SSX4O60224 188 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 GJB3O75712 270 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 ZWINTO95229 277 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 GNB3P16520 340 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 CLNS1AP54105 237 aaKnown RBP3.03□□□□□ -1.92
VBP1-204ENST00000625964 PNLIPRP2P54317 469 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 GNB1P62873 340 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 CHAF1BQ13112 559 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 KIAA1644Q3SXP7 199 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 C14orf177Q52M58 125 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 FAM114A1Q8IWE2 563 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 ZNF843Q8N446 348 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 POC5Q8NA72 575 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 TRIM58Q8NG06 486 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 ZFAND2BQ8WV99 257 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 NSL1Q96IY1 281 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 MYADMQ96S97 322 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 SPATC1LQ9H0A9 340 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 SIX2Q9NPC8 291 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 RHCGQ9UBD6 479 aa3.03□□□□□ -1.92
VBP1-204ENST00000625964 PTRH2Q9Y3E5 179 aaKnown RBP3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms