RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 HIST1H2ACQ93077 130 aa8.79□□□□□ -1
VCL-206ENST00000623461 IDI2Q9BXS1 227 aa8.79□□□□□ -1
VCL-206ENST00000623461 MROH8Q9H579 483 aa8.79□□□□□ -1
VCL-206ENST00000623461 PAK1IP1Q9NWT1 392 aaPredicted RBP8.79□□□□□ -1
VCL-206ENST00000623461 POLLQ9UGP5 575 aa8.79□□□□□ -1
VCL-206ENST00000623461 PTCH2Q9Y6C5 1203 aa8.79□□□□□ -1
VCL-206ENST00000623461 CXorf49A8MYA2 514 aaPredicted RBP8.79□□□□□ -1
VCL-206ENST00000623461 M0R233 179 aa8.79□□□□□ -1
VCL-206ENST00000623461 TSPAN3O60637 253 aa8.79□□□□□ -1
VCL-206ENST00000623461 COQ9O75208 318 aa8.79□□□□□ -1
VCL-206ENST00000623461 CILPO75339 1184 aa8.79□□□□□ -1
VCL-206ENST00000623461 CETPP11597 493 aa8.79□□□□□ -1
VCL-206ENST00000623461 MC4RP32245 332 aa8.79□□□□□ -1
VCL-206ENST00000623461 ADRA1BP35368 520 aa8.79□□□□□ -1
VCL-206ENST00000623461 HSDL1Q3SXM5 330 aa8.79□□□□□ -1
VCL-206ENST00000623461 KIAA0930Q6ICG6 404 aaPredicted RBP8.79□□□□□ -1
VCL-206ENST00000623461 SLC15A4Q8N697 577 aa8.79□□□□□ -1
VCL-206ENST00000623461 CEP76Q8TAP6 659 aa8.79□□□□□ -1
VCL-206ENST00000623461 MAPKAP1Q9BPZ7 522 aa8.79□□□□□ -1
VCL-206ENST00000623461 IL1RAPQ9NPH3 570 aa8.79□□□□□ -1
VCL-206ENST00000623461 PAQR5Q9NXK6 330 aaPredicted RBP8.79□□□□□ -1
VCL-206ENST00000623461 TESMINQ9Y4I5 508 aa8.79□□□□□ -1
VCL-206ENST00000623461 FGBP02675 491 aa8.78□□□□□ -1
VCL-206ENST00000623461 DNTTP04053 509 aa8.78□□□□□ -1
VCL-206ENST00000623461 BUD31P41223 144 aaPredicted RBP8.78□□□□□ -1
VCL-206ENST00000623461 HTR2BP41595 481 aa8.78□□□□□ -1
VCL-206ENST00000623461 HNRNPDQ14103 355 aaKnown RBP8.78□□□□□ -1
VCL-206ENST00000623461 TSTQ16762 297 aaKnown RBP8.78□□□□□ -1
VCL-206ENST00000623461 GPR153Q6NV75 609 aa8.78□□□□□ -1
VCL-206ENST00000623461 DCDC5Q6ZRR9 648 aa8.78□□□□□ -1
VCL-206ENST00000623461 ZNF367Q7RTV3 350 aa8.78□□□□□ -1
VCL-206ENST00000623461 OR10G2Q8NGC3 310 aa8.78□□□□□ -1
VCL-206ENST00000623461 BPIFB1Q8TDL5 484 aa8.78□□□□□ -1
VCL-206ENST00000623461 CDT1Q9H211 546 aa8.78□□□□□ -1
VCL-206ENST00000623461 SYNDIG1Q9H7V2 258 aa8.78□□□□□ -1
VCL-206ENST00000623461 IPPKQ9H8X2 491 aa8.78□□□□□ -1
VCL-206ENST00000623461 UXTQ9UBK9 157 aaPredicted RBP8.78□□□□□ -1
VCL-206ENST00000623461 MAU2Q9Y6X3 613 aa8.78□□□□□ -1
VCL-206ENST00000623461 A0A1B0GVG6 124 aa8.78□□□□□ -1
VCL-206ENST00000623461 PER2O15055 1255 aa8.78□□□□□ -1
VCL-206ENST00000623461 TEX28O15482 410 aa8.78□□□□□ -1
VCL-206ENST00000623461 SLC7A4O43246 635 aa8.78□□□□□ -1
VCL-206ENST00000623461 DFNA5O60443 496 aa8.78□□□□□ -1
VCL-206ENST00000623461 FPR1P21462 350 aa8.78□□□□□ -1
VCL-206ENST00000623461 MPP2Q14168 576 aa8.78□□□□□ -1
VCL-206ENST00000623461 ZNF697Q5TEC3 545 aa8.78□□□□□ -1
VCL-206ENST00000623461 RPTNQ6XPR3 784 aa8.78□□□□□ -1
VCL-206ENST00000623461 ZNF730Q6ZMV8 503 aa8.78□□□□□ -1
VCL-206ENST00000623461 CLP1Q92989 425 aaKnown RBP8.78□□□□□ -1
VCL-206ENST00000623461 SLC38A4Q969I6 547 aa8.78□□□□□ -1
VCL-206ENST00000623461 AKTIPQ9H8T0 292 aa8.78□□□□□ -1
VCL-206ENST00000623461 SEC14L3Q9UDX4 400 aa8.78□□□□□ -1
VCL-206ENST00000623461 AJAP1Q9UKB5 411 aaPredicted RBP8.78□□□□□ -1
VCL-206ENST00000623461 PTPRJQ12913 1337 aa8.78□□□□□ -1
VCL-206ENST00000623461 KERAO60938 352 aa8.78□□□□□ -1
VCL-206ENST00000623461 ITGB1P05556 798 aa8.78□□□□□ -1
VCL-206ENST00000623461 IL7RP16871 459 aa8.78□□□□□ -1
VCL-206ENST00000623461 TNNI3P19429 210 aa8.78□□□□□ -1
VCL-206ENST00000623461 PPP2R2BQ00005 443 aa8.78□□□□□ -1
VCL-206ENST00000623461 C6orf141Q5SZD1 244 aa8.78□□□□□ -1
VCL-206ENST00000623461 TSTD2Q5T7W7 516 aa8.78□□□□□ -1
VCL-206ENST00000623461 EIF5AL1Q6IS14 154 aaKnown RBP8.78□□□□□ -1
VCL-206ENST00000623461 CCBE1Q6UXH8 406 aaPredicted RBP8.78□□□□□ -1
VCL-206ENST00000623461 METTL3Q86U44 580 aaKnown RBP8.78□□□□□ -1
VCL-206ENST00000623461 TRIM48Q8IWZ4 208 aa8.78□□□□□ -1
VCL-206ENST00000623461 CGREF1Q99674 301 aa8.78□□□□□ -1
VCL-206ENST00000623461 HMGXB4Q9UGU5 601 aa8.78□□□□□ -1
VCL-206ENST00000623461 PCDHB7Q9Y5E2 793 aa8.78□□□□□ -1
VCL-206ENST00000623461 A0A1W2PP18 115 aa8.78□□□□□ -1
VCL-206ENST00000623461 C2CD4BA6NLJ0 364 aa8.78□□□□□ -1
VCL-206ENST00000623461 SLC19A2O60779 497 aa8.78□□□□□ -1
VCL-206ENST00000623461 ITGA10O75578 1167 aa8.78□□□□□ -1
VCL-206ENST00000623461 ZNF432O94892 652 aa8.78□□□□□ -1
VCL-206ENST00000623461 S100A2P29034 98 aa8.78□□□□□ -1
VCL-206ENST00000623461 CSTF2P33240 577 aaKnown RBP eCLIP8.78□□□□□ -1
VCL-206ENST00000623461 IRF9Q00978 393 aa8.78□□□□□ -1
VCL-206ENST00000623461 CAPSQ13938 189 aa8.78□□□□□ -1
VCL-206ENST00000623461 HACD2Q6Y1H2 254 aa8.78□□□□□ -1
VCL-206ENST00000623461 COMMD2Q86X83 199 aa8.78□□□□□ -1
VCL-206ENST00000623461 POMGNT2Q8NAT1 580 aa8.78□□□□□ -1
VCL-206ENST00000623461 GPRC5AQ8NFJ5 357 aa8.78□□□□□ -1
VCL-206ENST00000623461 CMASQ8NFW8 434 aaPredicted RBP8.78□□□□□ -1
VCL-206ENST00000623461 PYURFQ96I23 114 aa8.78□□□□□ -1
VCL-206ENST00000623461 PARK7Q99497 189 aaKnown RBP8.78□□□□□ -1
VCL-206ENST00000623461 TCRBV7S3A2A0A539 114 aa8.78□□□□□ -1
VCL-206ENST00000623461 OR2AT4A6NND4 320 aa8.78□□□□□ -1
VCL-206ENST00000623461 XPNPEP2O43895 674 aa8.78□□□□□ -1
VCL-206ENST00000623461 GSTT2P0CG29 244 aa8.78□□□□□ -1
VCL-206ENST00000623461 RPS12P25398 132 aaKnown RBP8.78□□□□□ -1
VCL-206ENST00000623461 PNLIPRP1P54315 467 aa8.78□□□□□ -1
VCL-206ENST00000623461 DNAJB13P59910 316 aa8.78□□□□□ -1
VCL-206ENST00000623461 FKBP1AP62942 108 aaKnown RBP8.78□□□□□ -1
VCL-206ENST00000623461 GRIK4Q16099 956 aa8.78□□□□□ -1
VCL-206ENST00000623461 KIAA1614Q5VZ46 1190 aa8.78□□□□□ -1
VCL-206ENST00000623461 MMAAQ8IVH4 418 aaKnown RBP8.78□□□□□ -1
VCL-206ENST00000623461 KLHL36Q8N4N3 616 aa8.78□□□□□ -1
VCL-206ENST00000623461 PCDHGB6Q9Y5F9 930 aa8.78□□□□□ -1
VCL-206ENST00000623461 KRBA1A5PL33 1030 aa8.78□□□□□ -1
VCL-206ENST00000623461 NT5C1B-RDH14C9J2C7 533 aa8.78□□□□□ -1
VCL-206ENST00000623461 BUD23O43709 281 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms