RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 ENPP7Q6UWV6 458 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 C16orf62Q7Z3J2 963 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 FGD2Q7Z6J4 655 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 C17orf64Q86WR6 236 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 MFSD6LQ8IWD5 586 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 RBFAQ8N0V3 343 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 LNX2Q8N448 690 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 EXOSC8Q96B26 276 aaKnown RBP8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 CIB1Q99828 191 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 KXD1Q9BQD3 176 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 NDUFA13Q9P0J0 144 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 SH3GLB1Q9Y371 365 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 WDR90Q96KV7 1748 aa8.16□□□□□ -1.1
PTPDC1-204ENST00000620992 A8MUA0 341 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 FAM47E-STBD1D6RA91 191 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 SDHDO14521 159 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 GNB5O14775 395 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 INPPL1O15357 1258 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 BCAS2O75934 225 aaPredicted RBP8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 PAK4O96013 591 aaPredicted RBP8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 FGF1P05230 155 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 TFPIP10646 304 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 PKMP14618 531 aaKnown RBP8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 TYRP1P17643 537 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 YAP1P46937 504 aaKnown RBP8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 ANXA11P50995 505 aaKnown RBP8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 CYP4F3Q08477 520 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 SCAPQ12770 1279 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 ZNF789Q5FWF6 425 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 PAGE2BQ5JRK9 111 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 ZCCHC8Q6NZY4 707 aaKnown RBP8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 AFTPHQ6ULP2 937 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 CUZD1Q86UP6 607 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 MARVELD2Q8N4S9 558 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 NKAPQ8N5F7 415 aaKnown RBP8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 LCN9Q8WX39 176 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 LPGAT1Q92604 370 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 DLG3Q92796 817 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 MTERF3Q96E29 417 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 TSPAN18Q96SJ8 248 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 TMEM79Q9BSE2 394 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 DCUN1D5Q9BTE7 237 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 RAD21L1Q9H4I0 556 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 RIMS3Q9UJD0 308 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 FBXW2Q9UKT8 454 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 RAB26Q9ULW5 256 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 TCAF1Q9Y4C2 921 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 C16orf96A6NNT2 1141 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 GTPBP1O00178 669 aaKnown RBP8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 EFCAB14O75071 495 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 NDST3O95803 873 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 HLA-DQB2P05538 268 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 LBPP18428 481 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 VIPR2P41587 438 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 ATP12AP54707 1039 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 STX4Q12846 297 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 GRSF1Q12849 480 aaKnown RBP eCLIP8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 GPRIN3Q6ZVF9 776 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 GALNT13Q8IUC8 556 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 SETD7Q8WTS6 366 aaKnown RBP8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 PROX1Q92786 737 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 TRMT61BQ9BVS5 477 aaKnown RBP8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 COQ10BQ9H8M1 238 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 CARS2Q9HA77 564 aaKnown RBP8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 ELOVL2Q9NXB9 296 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 BLOC1S6Q9UL45 172 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 MRPS7Q9Y2R9 242 aaKnown RBP8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 ARL5AQ9Y689 179 aa8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 INTS1Q8N201 2190 aaKnown RBP8.15□□□□□ -1.1
PTPDC1-204ENST00000620992 B4DGG1 531 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 KRT33AO76009 404 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 EOMESO95936 686 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 TFAP2AP05549 437 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 IDSP22304 550 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 HCAR3P49019 387 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 SH3BGRP55822 239 aaPredicted RBP8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 LSM3P62310 102 aaKnown RBP8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 CSNK2BP67870 215 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 LSAMPQ13449 338 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 MTX3Q5HYI7 312 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 KLHDC10Q6PID8 442 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 SPESP1Q6UW49 350 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 RALGPS2Q86X27 583 aaPredicted RBP8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 DHFR2Q86XF0 187 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 TMEM151AQ8N4L1 468 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 C3orf58Q8NDZ4 430 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 VANGL1Q8TAA9 524 aaPredicted RBP8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 ASZ1Q8WWH4 475 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 RIPOR3Q96MK2 946 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 SLC38A3Q99624 504 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 CNPPD1Q9BV87 410 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 KATNBL1Q9H079 304 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 OCEL1Q9H607 264 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 NOL11Q9H8H0 719 aaKnown RBP8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 FBRSL1Q9HCM7 1045 aaKnown RBP8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 PCDHGA4Q9Y5G9 962 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 RHPN2P1A8MT19 583 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 FAM220BPB1ANY3 271 aa8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 DENRO43583 198 aaKnown RBP8.15□□□□□ -1.11
PTPDC1-204ENST00000620992 CNTN5O94779 1100 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms