RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 FBXO10Q9UK96 956 aa19.26■□□□□ 0.67
PDLIM3-212ENST00000620787 SCML2Q9UQR0 700 aa19.26■□□□□ 0.67
PDLIM3-212ENST00000620787 F8W810 466 aa19.26■□□□□ 0.67
PDLIM3-212ENST00000620787 SLC22A1O15245 554 aa19.26■□□□□ 0.67
PDLIM3-212ENST00000620787 XPNPEP2O43895 674 aa19.26■□□□□ 0.67
PDLIM3-212ENST00000620787 CHRNA1P02708 482 aa19.26■□□□□ 0.67
PDLIM3-212ENST00000620787 SERPINF2P08697 491 aa19.26■□□□□ 0.67
PDLIM3-212ENST00000620787 ALOX5P09917 674 aa19.26■□□□□ 0.67
PDLIM3-212ENST00000620787 PKMP14618 531 aaKnown RBP19.26■□□□□ 0.67
PDLIM3-212ENST00000620787 ACVR2AP27037 513 aa19.26■□□□□ 0.67
PDLIM3-212ENST00000620787 RYKP34925 604 aa19.26■□□□□ 0.67
PDLIM3-212ENST00000620787 EFEMP1Q12805 493 aa19.26■□□□□ 0.67
PDLIM3-212ENST00000620787 CDK5R2Q13319 367 aa19.26■□□□□ 0.67
PDLIM3-212ENST00000620787 AP5B1Q2VPB7 878 aa19.26■□□□□ 0.67
PDLIM3-212ENST00000620787 CTSL3PQ5NE16 218 aa19.26■□□□□ 0.67
PDLIM3-212ENST00000620787 PLEKHH3Q7Z736 793 aa19.26■□□□□ 0.67
PDLIM3-212ENST00000620787 GIPC2Q8TF65 315 aa19.26■□□□□ 0.67
PDLIM3-212ENST00000620787 SLC13A3Q8WWT9 602 aa19.26■□□□□ 0.67
PDLIM3-212ENST00000620787 GTF2H4Q92759 462 aa19.26■□□□□ 0.67
PDLIM3-212ENST00000620787 FBXO8Q9NRD0 319 aa19.26■□□□□ 0.67
PDLIM3-212ENST00000620787 PMF1-BGLAPU3KQ54 211 aa19.26■□□□□ 0.67
PDLIM3-212ENST00000620787 DRGXA6NNA5 263 aa19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 CXCR6O00574 342 aa19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 SLC16A6O15403 523 aa19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 OR1I1O60431 355 aa19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 BMP4P12644 408 aa19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 FSHRP23945 695 aa19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 ARL1P40616 181 aaPredicted RBP19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 IL2P60568 153 aa19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 ACOX1Q15067 660 aa19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 C18orf21Q32NC0 220 aaPredicted RBP19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 DCP2Q8IU60 420 aaKnown RBP19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 MSRB3Q8IXL7 192 aa19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 PIANPQ8IYJ0 282 aa19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 ATP6V0D2Q8N8Y2 350 aa19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 MDGA1Q8NFP4 955 aa19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 OR52E4Q8NGH9 312 aa19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 FAM162AQ96A26 154 aa19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 MYEOVQ96EZ4 313 aa19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 THUMPD3Q9BV44 507 aaKnown RBP19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 ALOXE3Q9BYJ1 711 aa19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 PDFQ9HBH1 243 aa19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 TRPV2Q9Y5S1 764 aa19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 GPC6Q9Y625 555 aaPredicted RBP19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 DNAH12Q6ZR08 3092 aa19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 MOXD2PA6NHM9 499 aa19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 OR7A17O14581 309 aa19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 ABRAXAS2Q15018 415 aa19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 INAQ16352 499 aa19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 BCL2A1Q16548 175 aa19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 ALG1LQ6GMV1 187 aa19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 PSAPL1Q6NUJ1 521 aa19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 MRPL10Q7Z7H8 261 aaKnown RBP19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 ADHFE1Q8IWW8 467 aa19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 EID3Q8N140 333 aa19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 BTBD2Q9BX70 525 aa19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 TRIT1Q9H3H1 467 aaKnown RBP19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 SLC25A37Q9NYZ2 338 aa19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 CPA4Q9UI42 421 aa19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 INTS6Q9UL03 887 aaKnown RBP19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 ACTL7AQ9Y615 435 aa19.25■□□□□ 0.67
PDLIM3-212ENST00000620787 DOCK3Q8IZD9 2030 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 ELOVL7A1L3X0 281 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 SCELO95171 688 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 NADKO95544 446 aaPredicted RBP19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 CNPP09543 421 aaKnown RBP19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 OR1E1P30953 314 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 GPR15P49685 360 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 IL18R1Q13478 541 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 PON2Q15165 354 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 GLT6D1Q7Z4J2 308 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 GOLGA7Q7Z5G4 137 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 OR4F6Q8NGB9 312 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 MCOLN3Q8TDD5 553 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 YIPF6Q96EC8 236 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 RPRD1AQ96P16 312 aaPredicted RBP19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 SMIM14Q96QK8 99 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 ZBED2Q9BTP6 218 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 TBCDQ9BTW9 1192 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 HERC2P3Q9BVR0 1158 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 NECTIN3Q9NQS3 549 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 SACM1LQ9NTJ5 587 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 TMED5Q9Y3A6 229 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 M0QX08 132 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 M0QZ92 97 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 BCKDKO14874 412 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 KDM1AO60341 852 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 PFKLP17858 780 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 MSH3P20585 1137 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 ALDH4A1P30038 563 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 CD6P30203 668 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 CPT1AP50416 773 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 DNASE1L3Q13609 305 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 RAPSNQ13702 412 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 PTGR1Q14914 329 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 INAVAQ3KP66 663 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 SLC39A12Q504Y0 691 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 CHPFQ8IZ52 775 aa19.24■□□□□ 0.67
PDLIM3-212ENST00000620787 ZCCHC7Q8N3Z6 543 aaKnown RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms