RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 TRIM46Q7Z4K8 759 aa12.87□□□□□ -0.35
SKP2-209ENST00000620197 THEM5Q8N1Q8 247 aa12.87□□□□□ -0.35
SKP2-209ENST00000620197 SIDT2Q8NBJ9 832 aaKnown RBP12.87□□□□□ -0.35
SKP2-209ENST00000620197 PPM1MQ96MI6 270 aa12.87□□□□□ -0.35
SKP2-209ENST00000620197 ZNF300Q96RE9 604 aaPredicted RBP12.87□□□□□ -0.35
SKP2-209ENST00000620197 DUSP21Q9H596 190 aa12.87□□□□□ -0.35
SKP2-209ENST00000620197 CLMPQ9H6B4 373 aa12.87□□□□□ -0.35
SKP2-209ENST00000620197 DFNA5O60443 496 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 MAPK10P53779 464 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 IST1P53990 364 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 KCNAB2Q13303 367 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 MTA1Q13330 715 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 ZNF846Q147U1 533 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 LRIF1Q5T3J3 769 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 EGFLAMQ63HQ2 1017 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 GOLGA7Q7Z5G4 137 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 ZDHHC13Q8IUH4 622 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 ATP6V0D2Q8N8Y2 350 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 CORO1BQ9BR76 489 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 FBXO44Q9H4M3 255 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 SCUBE2Q9NQ36 999 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 MYADML2A6NDP7 307 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 CLDN25C9JDP6 229 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 OR1I1O60431 355 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 INMTO95050 263 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 POMCP01189 267 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 PKMP14618 531 aaKnown RBP12.86□□□□□ -0.35
SKP2-209ENST00000620197 HOXB6P17509 224 aaKnown RBP12.86□□□□□ -0.35
SKP2-209ENST00000620197 HPCAL1P37235 193 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 DCTP40126 519 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 EMX1Q04741 257 aaPredicted RBP12.86□□□□□ -0.35
SKP2-209ENST00000620197 DSC1Q08554 894 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 GBX1Q14549 363 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 ABRAXAS2Q15018 415 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 SCIMPQ6UWF3 145 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 PRSS48Q7RTY5 328 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 GPR155Q7Z3F1 870 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 CIR1Q86X95 450 aaPredicted RBP12.86□□□□□ -0.35
SKP2-209ENST00000620197 HS3ST5Q8IZT8 346 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 NRBF2Q96F24 287 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 KAT8Q9H7Z6 458 aaKnown RBP12.86□□□□□ -0.35
SKP2-209ENST00000620197 SERHLQ9NQF3 203 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 NECTIN3Q9NQS3 549 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 SUN2Q9UH99 717 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 EVLQ9UI08 416 aaPredicted RBP12.86□□□□□ -0.35
SKP2-209ENST00000620197 MAN2B2Q9Y2E5 1009 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 SLC27A5Q9Y2P5 690 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 FAM32AQ9Y421 112 aaKnown RBP12.86□□□□□ -0.35
SKP2-209ENST00000620197 CCL15-CCL14A0A0B4J2E2 113 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 LOC100130705A0A1B0GUX0 176 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 FAM220BPB1ANY3 271 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 TAPBPO15533 448 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 DGKQP52824 942 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 CCL15Q16663 113 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 AGAP7PQ5VUJ5 663 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 RAP1GAP2Q684P5 730 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 CRTC3Q6UUV7 619 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 C10orf111Q8N326 155 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 PGBD3Q8N328 593 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 ZCCHC7Q8N3Z6 543 aaKnown RBP12.86□□□□□ -0.35
SKP2-209ENST00000620197 OR4K2Q8NGD2 314 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 DYNC2LI1Q8TCX1 351 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 PHF10Q8WUB8 498 aaKnown RBP12.86□□□□□ -0.35
SKP2-209ENST00000620197 UBTD2Q8WUN7 234 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 CDK15Q96Q40 435 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 ERVW-1Q9UQF0 538 aa12.86□□□□□ -0.35
SKP2-209ENST00000620197 ARIH1Q9Y4X5 557 aaPredicted RBP12.86□□□□□ -0.35
SKP2-209ENST00000620197 C16orf96A6NNT2 1141 aa12.85□□□□□ -0.35
SKP2-209ENST00000620197 SCELO95171 688 aa12.85□□□□□ -0.35
SKP2-209ENST00000620197 VNN2O95498 520 aa12.85□□□□□ -0.35
SKP2-209ENST00000620197 OR4Q2P0C623 313 aa12.85□□□□□ -0.35
SKP2-209ENST00000620197 PIRTP0C851 137 aa12.85□□□□□ -0.35
SKP2-209ENST00000620197 SLC35A2P78381 396 aa12.85□□□□□ -0.35
SKP2-209ENST00000620197 CHRNB3Q05901 458 aa12.85□□□□□ -0.35
SKP2-209ENST00000620197 CYP4F3Q08477 520 aa12.85□□□□□ -0.35
SKP2-209ENST00000620197 TRIM32Q13049 653 aa12.85□□□□□ -0.35
SKP2-209ENST00000620197 CDK5R2Q13319 367 aa12.85□□□□□ -0.35
SKP2-209ENST00000620197 ADPRMQ3LIE5 342 aa12.85□□□□□ -0.35
SKP2-209ENST00000620197 SYT6Q5T7P8 510 aaPredicted RBP12.85□□□□□ -0.35
SKP2-209ENST00000620197 STK32CQ86UX6 486 aa12.85□□□□□ -0.35
SKP2-209ENST00000620197 GPSM1Q86YR5 675 aa12.85□□□□□ -0.35
SKP2-209ENST00000620197 DCP2Q8IU60 420 aaKnown RBP12.85□□□□□ -0.35
SKP2-209ENST00000620197 CDYL2Q8N8U2 506 aa12.85□□□□□ -0.35
SKP2-209ENST00000620197 OR5K1Q8NHB7 308 aa12.85□□□□□ -0.35
SKP2-209ENST00000620197 HASPINQ8TF76 798 aa12.85□□□□□ -0.35
SKP2-209ENST00000620197 SLC13A3Q8WWT9 602 aa12.85□□□□□ -0.35
SKP2-209ENST00000620197 POP5Q969H6 163 aaKnown RBP12.85□□□□□ -0.35
SKP2-209ENST00000620197 SLC10A4Q96EP9 437 aa12.85□□□□□ -0.35
SKP2-209ENST00000620197 CEP295NLQ96MC4 621 aa12.85□□□□□ -0.35
SKP2-209ENST00000620197 ALOXE3Q9BYJ1 711 aa12.85□□□□□ -0.35
SKP2-209ENST00000620197 WDR12Q9GZL7 423 aaKnown RBP12.85□□□□□ -0.35
SKP2-209ENST00000620197 ATP13A3Q9H7F0 1226 aa12.85□□□□□ -0.35
SKP2-209ENST00000620197 SLC6A13Q9NSD5 602 aa12.85□□□□□ -0.35
SKP2-209ENST00000620197 ELOVL2Q9NXB9 296 aa12.85□□□□□ -0.35
SKP2-209ENST00000620197 VPS9D1Q9Y2B5 631 aa12.85□□□□□ -0.35
SKP2-209ENST00000620197 ALPK3Q96L96 1907 aa12.85□□□□□ -0.35
SKP2-209ENST00000620197 GPR182O15218 404 aa12.85□□□□□ -0.35
SKP2-209ENST00000620197 NOL3O60936 208 aaKnown RBP12.85□□□□□ -0.35
SKP2-209ENST00000620197 XYLBO75191 536 aa12.85□□□□□ -0.35
SKP2-209ENST00000620197 NIPSNAP2O75323 286 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms