RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 CD300AQ9UGN4 299 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 MAGEL2Q9UJ55 1249 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 FAM92AA1XBS5 289 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 C2orf78A6NCI8 922 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 COCHO43405 550 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 TSPAN3O60637 253 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 KCNH1O95259 989 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 PDGFAP04085 211 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 HSD17B1P14061 328 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 NR4A1P22736 598 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 HERVK_113P63132 956 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 HTRA4P83105 476 aaPredicted RBP6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 SMAD3P84022 425 aaKnown RBP6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 PLIN5Q00G26 463 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 TOP3AQ13472 1001 aaPredicted RBP6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 KCTD11Q693B1 232 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 TXNDC8Q6A555 127 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 RBM23Q86U06 439 aaKnown RBP6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 CIR1Q86X95 450 aaPredicted RBP6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 TCEAL8Q8IYN2 117 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 TTC30BQ8N4P2 665 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 MINDY1Q8N5J2 469 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 SLC15A4Q8N697 577 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 SCAIQ8N9R8 606 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 FNDC5Q8NAU1 212 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 HPS1Q92902 700 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 FAM162AQ96A26 154 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 SLC39A13Q96H72 371 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 THUMPD3Q9BV44 507 aaKnown RBP6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 ERVK-6Q9BXR3 956 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 UGT2B28Q9BY64 529 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 ZBP1Q9H171 429 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 SYTL2Q9HCH5 934 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 SEMA4BQ9NPR2 832 aaPredicted RBP6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 SCN3BQ9NY72 215 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 CDH7Q9ULB5 785 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 MICAL3Q7RTP6 2002 aa6.89□□□□□ -1.31
SRGAP3-213ENST00000618999 TMEM247A6NEH6 219 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 HIDE1A8MVS5 230 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 CCL16O15467 120 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 SYNCRIPO60506 623 aaKnown RBP6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 SLC22A3O75751 556 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 CNTN5O94779 1100 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 HMGA1P17096 107 aaKnown RBP6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 GJA1P17302 382 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 OR1E1P30953 314 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 GLYATQ6IB77 296 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 SLCO6A1Q86UG4 719 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 ARL14EPQ8N8R7 260 aaPredicted RBP6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 RTL3Q8N8U3 475 aaKnown RBP6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 FIG4Q92562 907 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 DUS3LQ96G46 650 aaKnown RBP6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 TTLL2Q9BWV7 592 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 SLC39A8Q9C0K1 460 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 SARDHQ9UL12 918 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 NCF1BA6NI72 391 aaPredicted RBP6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 NCF1CA8MVU1 366 aaPredicted RBP6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 H3BMM5 538 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 UBXN8O00124 270 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 HS6ST1O60243 411 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 RSL1D1O76021 490 aaKnown RBP6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 NCF1P14598 390 aaPredicted RBP6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 GABRB3P28472 473 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 CORO1AP31146 461 aaKnown RBP6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 TRPC1P48995 793 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 RENBPP51606 427 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 OXCT1P55809 520 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 IL5RAQ01344 420 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 RAD51Q06609 339 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 GALNT1Q10472 559 aaPredicted RBP6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 ILF2Q12905 390 aaKnown RBP6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 SPATS1Q496A3 300 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 ALFQ53S48 1182 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 RABL3Q5HYI8 236 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 ZNF697Q5TEC3 545 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 ANKRD26P1Q6NSI1 321 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 TMEM53Q6P2H8 277 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 SPATA19Q7Z5L4 167 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 KIAA2013Q8IYS2 634 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 PHOSPHO2Q8TCD6 241 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 BLOC1S5Q8TDH9 187 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 SLC22A17Q8WUG5 538 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 HERVK_113Q902F9 699 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 VPS33AQ96AX1 596 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 C1orf74Q96LT6 269 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 FRMD6Q96NE9 622 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 MUS81Q96NY9 551 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 KLHL5Q96PQ7 755 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 NAA50Q9GZZ1 169 aaKnown RBP6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 TNKS2Q9H2K2 1166 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 NDFIP2Q9NV92 336 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 SCHIP1Q9P0W5 487 aaPredicted RBP6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 FNIP2Q9P278 1114 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 PDE10AQ9Y233 779 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 ERGIC3Q9Y282 383 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 FNDC3AQ9Y2H6 1198 aaKnown RBP6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 TMED5Q9Y3A6 229 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 ANGPTL3Q9Y5C1 460 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 H0YAE9 185 aa6.88□□□□□ -1.31
SRGAP3-213ENST00000618999 PER2O15055 1255 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms