RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 CDC42BPBQ9Y5S2 1711 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 SMIM28A0A1B0GU29 152 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 C5orf51A6NDU8 294 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 FFAR3O14843 346 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 SLC30A4O14863 429 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 GPR42O15529 346 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 IFNGP01579 166 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 BMP7P18075 431 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 MYL9P24844 172 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 EIF2S3P41091 472 aaKnown RBP3.02□□□□□ -1.93
LPP-221ENST00000618621 CLCN4P51793 760 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 IST1P53990 364 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 HSPA14Q0VDF9 509 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.02□□□□□ -1.939e-7■■■■□ 23.4
LPP-221ENST00000618621 TMEM198Q66K66 360 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 TAPT1Q6NXT6 567 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 CDHR3Q6ZTQ4 885 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 FAM35AQ86V20 835 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 COLGALT2Q8IYK4 626 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 CHPFQ8IZ52 775 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 FNDC8Q8TC99 324 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 SLC39A3Q9BRY0 314 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 CIPCQ9C0C6 399 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 CDT1Q9H211 546 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 KCNK13Q9HB14 408 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 MAFFQ9ULX9 164 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 PCDH8O95206 1070 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 ESR1P03372 595 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 CCNYL3P0C7X3 344 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 ANXA8P13928 327 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 CDH13P55290 713 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 SRP54P61011 504 aaKnown RBP3.02□□□□□ -1.93
LPP-221ENST00000618621 ZNF33AQ06730 810 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 XKR6Q5GH73 641 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 SPESP1Q6UW49 350 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 GPR180Q86V85 440 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 PCDH19Q8TAB3 1148 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 FBXL18Q96ME1 805 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 PPM1MQ96MI6 270 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 GSDMCQ9BYG8 508 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 QPCTLQ9NXS2 382 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 TUBD1Q9UJT1 453 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 PHF24Q9UPV7 400 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 SLIT1O75093 1534 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 MYO5CQ9NQX4 1742 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 HEATR1Q9H583 2144 aaKnown RBP3.02□□□□□ -1.93
LPP-221ENST00000618621 A0A1W2PRG6 482 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 FAM86C2PA6NEL3 165 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 ZNF99A8MXY4 864 aaPredicted RBP3.02□□□□□ -1.93
LPP-221ENST00000618621 BOLA2-SMG1P6H3BVE0 249 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 EOMESO95936 686 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 FABP3P05413 133 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 PTGER3P43115 390 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 ALDH3A2P51648 485 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 PRKCDQ05655 676 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 FGD3Q5JSP0 725 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 CCBE1Q6UXH8 406 aaPredicted RBP3.02□□□□□ -1.93
LPP-221ENST00000618621 OXR1Q8N573 874 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 SCAIQ8N9R8 606 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 TTLQ8NG68 377 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 ADAM2Q99965 735 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 TTPALQ9BTX7 342 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 GPN1Q9HCN4 374 aaPredicted RBP3.02□□□□□ -1.93
LPP-221ENST00000618621 RWDD3Q9Y3V2 267 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 RIPK3Q9Y572 518 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 PCDHGA10Q9Y5H3 936 aa3.02□□□□□ -1.93
LPP-221ENST00000618621 SH3PXD2BA1X283 911 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 OR14I1A6ND48 311 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 EFCAB9A8MZ26 197 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 BHMG1C9JSJ3 638 aaPredicted RBP3.01□□□□□ -1.93
LPP-221ENST00000618621 E9PAM4 449 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 SYN3O14994 580 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 NDUFB5O43674 189 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 CD48P09326 243 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 CDH4P55283 916 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 LSM3P62310 102 aaKnown RBP3.01□□□□□ -1.93
LPP-221ENST00000618621 RGS1Q08116 209 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 E2F2Q14209 437 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 SEMA3AQ14563 771 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 FAM91A1Q658Y4 838 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 CXCL17Q6UXB2 119 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 HACD2Q6Y1H2 254 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 CAND1Q86VP6 1230 aaKnown RBP3.01□□□□□ -1.93
LPP-221ENST00000618621 MAGEH1Q9H213 219 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 CAB39LQ9H9S4 337 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 OXSMQ9NWU1 459 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 SMPD4Q9NXE4 827 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 ZNF221Q9UK13 617 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 SAMD4AQ9UPU9 718 aaKnown RBP3.01□□□□□ -1.93
LPP-221ENST00000618621 SNX10Q9Y5X0 201 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 STYXL1Q9Y6J8 313 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 COLEC10Q9Y6Z7 277 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 GTPBP1O00178 669 aaKnown RBP3.01□□□□□ -1.93
LPP-221ENST00000618621 ADAMDEC1O15204 470 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 CLPXO76031 633 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 AP2A2O94973 939 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 CKMT2P17540 419 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 IKBKEQ14164 716 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 ZFP69Q49AA0 526 aa3.01□□□□□ -1.93
LPP-221ENST00000618621 TXNRD3NBQ6F5E7 133 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms