RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 LNPEPQ9UIQ6 1025 aa9.44□□□□□ -0.9
TARDBP-218ENST00000617172 PCDHGA6Q9Y5G7 932 aa9.44□□□□□ -0.9
TARDBP-218ENST00000617172 CFAP20Q9Y6A4 193 aaKnown RBP9.44□□□□□ -0.9
TARDBP-218ENST00000617172 SDK2Q58EX2 2172 aa9.43□□□□□ -0.9
TARDBP-218ENST00000617172 ZFC3H1O60293 1989 aaKnown RBP9.43□□□□□ -0.9
TARDBP-218ENST00000617172 OR6C74A6NCV1 312 aa9.43□□□□□ -0.9
TARDBP-218ENST00000617172 MROH6A6NGR9 719 aa9.43□□□□□ -0.9
TARDBP-218ENST00000617172 C21orf140B9A014 251 aa9.43□□□□□ -0.9
TARDBP-218ENST00000617172 SUV39H1O43463 412 aa9.43□□□□□ -0.9
TARDBP-218ENST00000617172 SGTAO43765 313 aa9.43□□□□□ -0.9
TARDBP-218ENST00000617172 KRT86O43790 486 aa9.43□□□□□ -0.9
TARDBP-218ENST00000617172 PRKAR1AP10644 381 aa9.43□□□□□ -0.9
TARDBP-218ENST00000617172 FOLR1P15328 257 aa9.43□□□□□ -0.9
TARDBP-218ENST00000617172 ZNF28P17035 718 aa9.43□□□□□ -0.9
TARDBP-218ENST00000617172 TPH1P17752 444 aa9.43□□□□□ -0.9
TARDBP-218ENST00000617172 PSMA3P25788 255 aa9.43□□□□□ -0.9
TARDBP-218ENST00000617172 DLSTP36957 453 aa9.43□□□□□ -0.9
TARDBP-218ENST00000617172 FDFT1P37268 417 aa9.43□□□□□ -0.9
TARDBP-218ENST00000617172 NSG1P42857 185 aa9.43□□□□□ -0.9
TARDBP-218ENST00000617172 GSDMDP57764 484 aa9.43□□□□□ -0.9
TARDBP-218ENST00000617172 TUBB4BP68371 445 aa9.43□□□□□ -0.9
TARDBP-218ENST00000617172 TMPRSS15P98073 1019 aa9.43□□□□□ -0.9
TARDBP-218ENST00000617172 PLOD1Q02809 727 aaPredicted RBP9.43□□□□□ -0.9
TARDBP-218ENST00000617172 KCNC4Q03721 635 aa9.43□□□□□ -0.9
TARDBP-218ENST00000617172 TUBB2AQ13885 445 aa9.43□□□□□ -0.9
TARDBP-218ENST00000617172 SERPINA9Q86WD7 417 aa9.43□□□□□ -0.9
TARDBP-218ENST00000617172 GAS2L3Q86XJ1 694 aa9.43□□□□□ -0.9
TARDBP-218ENST00000617172 GALNT6Q8NCL4 622 aa9.43□□□□□ -0.9
TARDBP-218ENST00000617172 LCN9Q8WX39 176 aa9.43□□□□□ -0.9
TARDBP-218ENST00000617172 ELMO2Q96JJ3 720 aa9.43□□□□□ -0.9
TARDBP-218ENST00000617172 DNAJC1Q96KC8 554 aaKnown RBP9.43□□□□□ -0.9
TARDBP-218ENST00000617172 FERD3LQ96RJ6 166 aa9.43□□□□□ -0.9
TARDBP-218ENST00000617172 TUBB2BQ9BVA1 445 aa9.43□□□□□ -0.9
TARDBP-218ENST00000617172 GPR87Q9BY21 358 aa9.43□□□□□ -0.9
TARDBP-218ENST00000617172 SRMSQ9H3Y6 488 aa9.43□□□□□ -0.9
TARDBP-218ENST00000617172 FAM96AQ9H5X1 160 aa9.43□□□□□ -0.9
TARDBP-218ENST00000617172 COG4Q9H9E3 785 aa9.43□□□□□ -0.9
TARDBP-218ENST00000617172 C1GALT1Q9NS00 363 aa9.43□□□□□ -0.9
TARDBP-218ENST00000617172 KCND1Q9NSA2 647 aa9.43□□□□□ -0.9
TARDBP-218ENST00000617172 FAM8A1Q9UBU6 413 aa9.43□□□□□ -0.9
TARDBP-218ENST00000617172 CROTQ9UKG9 612 aa9.43□□□□□ -0.9
TARDBP-218ENST00000617172 PACSIN2Q9UNF0 486 aaPredicted RBP9.43□□□□□ -0.9
TARDBP-218ENST00000617172 BOD1L1Q8NFC6 3051 aa9.42□□□□□ -0.9
TARDBP-218ENST00000617172 HEATR9A2RTY3 570 aa9.42□□□□□ -0.9
TARDBP-218ENST00000617172 LIN7AO14910 233 aaPredicted RBP9.42□□□□□ -0.9
TARDBP-218ENST00000617172 KATNA1O75449 491 aa9.42□□□□□ -0.9
TARDBP-218ENST00000617172 CREG1O75629 220 aa9.42□□□□□ -0.9
TARDBP-218ENST00000617172 WISP1O95388 367 aa9.42□□□□□ -0.9
TARDBP-218ENST00000617172 PPARGP37231 505 aaPredicted RBP9.42□□□□□ -0.9
TARDBP-218ENST00000617172 CSRP3P50461 194 aa9.42□□□□□ -0.9
TARDBP-218ENST00000617172 PPP1CAP62136 330 aa9.42□□□□□ -0.9
TARDBP-218ENST00000617172 CDH17Q12864 832 aa9.42□□□□□ -0.9
TARDBP-218ENST00000617172 ITIH4Q14624 930 aa9.42□□□□□ -0.9
TARDBP-218ENST00000617172 POU6F1Q14863 301 aa9.42□□□□□ -0.9
TARDBP-218ENST00000617172 DEFB109BQ30KR1 87 aa9.42□□□□□ -0.9
TARDBP-218ENST00000617172 SEL1L2Q5TEA6 688 aa9.42□□□□□ -0.9
TARDBP-218ENST00000617172 LYPLAL1Q5VWZ2 237 aa9.42□□□□□ -0.9
TARDBP-218ENST00000617172 PWWP2BQ6NUJ5 590 aa9.42□□□□□ -0.9
TARDBP-218ENST00000617172 C16orf46Q6P387 395 aa9.42□□□□□ -0.9
TARDBP-218ENST00000617172 DNAAF3Q8N9W5 541 aa9.42□□□□□ -0.9
TARDBP-218ENST00000617172 SPC24Q8NBT2 197 aa9.42□□□□□ -0.9
TARDBP-218ENST00000617172 OR4E2Q8NGC2 313 aa9.42□□□□□ -0.9
TARDBP-218ENST00000617172 TFGQ92734 400 aaPredicted RBP9.42□□□□□ -0.9
TARDBP-218ENST00000617172 PEX13Q92968 403 aa9.42□□□□□ -0.9
TARDBP-218ENST00000617172 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.42□□□□□ -0.97e-6■■■■■ 27.5
TARDBP-218ENST00000617172 RMDN2Q96LZ7 410 aa9.42□□□□□ -0.9
TARDBP-218ENST00000617172 DESI2Q9BSY9 194 aa9.42□□□□□ -0.9
TARDBP-218ENST00000617172 OR52A5Q9H2C5 316 aa9.42□□□□□ -0.9
TARDBP-218ENST00000617172 TFB2MQ9H5Q4 396 aaKnown RBP9.42□□□□□ -0.9
TARDBP-218ENST00000617172 CLMPQ9H6B4 373 aa9.42□□□□□ -0.9
TARDBP-218ENST00000617172 FANCEQ9HB96 536 aa9.42□□□□□ -0.9
TARDBP-218ENST00000617172 LHX9Q9NQ69 397 aa9.42□□□□□ -0.9
TARDBP-218ENST00000617172 LATS2Q9NRM7 1088 aa9.42□□□□□ -0.9
TARDBP-218ENST00000617172 SMARCAL1Q9NZC9 954 aa9.42□□□□□ -0.9
TARDBP-218ENST00000617172 ANAPC2Q9UJX6 822 aa9.42□□□□□ -0.9
TARDBP-218ENST00000617172 RIMKLBQ9ULI2 386 aa9.42□□□□□ -0.9
TARDBP-218ENST00000617172 ZNF148Q9UQR1 794 aa9.42□□□□□ -0.9
TARDBP-218ENST00000617172 BTRCQ9Y297 605 aa9.42□□□□□ -0.9
TARDBP-218ENST00000617172 PIPSLA2A3N6 862 aa9.41□□□□□ -0.9
TARDBP-218ENST00000617172 E7EVH7 732 aa9.41□□□□□ -0.9
TARDBP-218ENST00000617172 AP3B1O00203 1094 aa9.41□□□□□ -0.9
TARDBP-218ENST00000617172 TERTO14746 1132 aaKnown RBP9.41□□□□□ -0.9
TARDBP-218ENST00000617172 LIASO43766 372 aa9.41□□□□□ -0.9
TARDBP-218ENST00000617172 KDM1AO60341 852 aa9.41□□□□□ -0.9
TARDBP-218ENST00000617172 CPNE3O75131 537 aaKnown RBP9.41□□□□□ -0.9
TARDBP-218ENST00000617172 SUN1O94901 812 aa9.41□□□□□ -0.9
TARDBP-218ENST00000617172 FTH1P02794 183 aa9.41□□□□□ -0.9
TARDBP-218ENST00000617172 KLK3P07288 261 aaPredicted RBP9.41□□□□□ -0.9
TARDBP-218ENST00000617172 MSL3P1P0C860 447 aa9.41□□□□□ -0.9
TARDBP-218ENST00000617172 EBLN1P0CF75 366 aa9.41□□□□□ -0.9
TARDBP-218ENST00000617172 POLR2CP19387 275 aaPredicted RBP9.41□□□□□ -0.9
TARDBP-218ENST00000617172 CDH3P22223 829 aa9.41□□□□□ -0.9
TARDBP-218ENST00000617172 F8A1P23610 371 aa9.41□□□□□ -0.9
TARDBP-218ENST00000617172 MSNP26038 577 aaKnown RBP9.41□□□□□ -0.9
TARDBP-218ENST00000617172 OAS2P29728 719 aaKnown RBP9.41□□□□□ -0.9
TARDBP-218ENST00000617172 PRDX3P30048 256 aaKnown RBP9.41□□□□□ -0.9
TARDBP-218ENST00000617172 LMAN1P49257 510 aa9.41□□□□□ -0.9
TARDBP-218ENST00000617172 CDKN1CP49918 316 aaPredicted RBP9.41□□□□□ -0.9
TARDBP-218ENST00000617172 GDF10P55107 478 aa9.41□□□□□ -0.9
TARDBP-218ENST00000617172 RPS15P62841 145 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms