RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 B3GNT3Q9Y2A9 372 aa12.97□□□□□ -0.33
MSH6-214ENST00000616033 ZNF451Q9Y4E5 1061 aa12.97□□□□□ -0.33
MSH6-214ENST00000616033 PRRC2BQ5JSZ5 2229 aaKnown RBP12.97□□□□□ -0.33
MSH6-214ENST00000616033 SOCS7O14512 581 aa12.97□□□□□ -0.33
MSH6-214ENST00000616033 RFPL2O75678 378 aa12.97□□□□□ -0.33
MSH6-214ENST00000616033 LRATO95237 230 aa12.97□□□□□ -0.33
MSH6-214ENST00000616033 CRYZL1O95825 349 aa12.97□□□□□ -0.33
MSH6-214ENST00000616033 SERPINA1P01009 418 aa12.97□□□□□ -0.33
MSH6-214ENST00000616033 CDK5R2Q13319 367 aa12.97□□□□□ -0.33
MSH6-214ENST00000616033 SV2CQ496J9 727 aa12.97□□□□□ -0.33
MSH6-214ENST00000616033 RANBP10Q6VN20 620 aa12.97□□□□□ -0.33
MSH6-214ENST00000616033 PHYKPLQ8IUZ5 450 aa12.97□□□□□ -0.33
MSH6-214ENST00000616033 CNTN4Q8IWV2 1026 aa12.97□□□□□ -0.33
MSH6-214ENST00000616033 ARHGAP12Q8IWW6 846 aa12.97□□□□□ -0.33
MSH6-214ENST00000616033 GPC2Q8N158 579 aa12.97□□□□□ -0.33
MSH6-214ENST00000616033 ATG16L2Q8NAA4 619 aa12.97□□□□□ -0.33
MSH6-214ENST00000616033 ZMIZ2Q8NF64 920 aa12.97□□□□□ -0.33
MSH6-214ENST00000616033 LILRB4Q8NHJ6 448 aa12.97□□□□□ -0.33
MSH6-214ENST00000616033 GPR152Q8TDT2 470 aa12.97□□□□□ -0.33
MSH6-214ENST00000616033 PSMG2Q969U7 264 aa12.97□□□□□ -0.33
MSH6-214ENST00000616033 MUL1Q969V5 352 aa12.97□□□□□ -0.33
MSH6-214ENST00000616033 ZNF486Q96H40 463 aaPredicted RBP12.97□□□□□ -0.33
MSH6-214ENST00000616033 PAAF1Q9BRP4 392 aa12.97□□□□□ -0.33
MSH6-214ENST00000616033 TNKS2Q9H2K2 1166 aa12.97□□□□□ -0.33
MSH6-214ENST00000616033 ZNF112Q9UJU3 913 aa12.97□□□□□ -0.33
MSH6-214ENST00000616033 C3orf18Q9UK00 162 aa12.97□□□□□ -0.33
MSH6-214ENST00000616033 GMPPBQ9Y5P6 360 aa12.97□□□□□ -0.33
MSH6-214ENST00000616033 PDZK1P1A8MUH7 402 aa12.96□□□□□ -0.33
MSH6-214ENST00000616033 UPK3BL1B0FP48 263 aa12.96□□□□□ -0.33
MSH6-214ENST00000616033 UPK3BL2E5RIL1 263 aa12.96□□□□□ -0.33
MSH6-214ENST00000616033 PSMD3O43242 534 aa12.96□□□□□ -0.33
MSH6-214ENST00000616033 KCNK2O95069 426 aa12.96□□□□□ -0.33
MSH6-214ENST00000616033 PRSS23O95084 383 aa12.96□□□□□ -0.33
MSH6-214ENST00000616033 FKBP9O95302 570 aa12.96□□□□□ -0.33
MSH6-214ENST00000616033 HAPLN1P10915 354 aaPredicted RBP12.96□□□□□ -0.33
MSH6-214ENST00000616033 UMPSP11172 480 aa12.96□□□□□ -0.33
MSH6-214ENST00000616033 FAM189BP81408 668 aa12.96□□□□□ -0.33
MSH6-214ENST00000616033 IFITM2Q01629 132 aa12.96□□□□□ -0.33
MSH6-214ENST00000616033 RCAN2Q14206 197 aa12.96□□□□□ -0.33
MSH6-214ENST00000616033 CLCA4Q14CN2 919 aa12.96□□□□□ -0.33
MSH6-214ENST00000616033 HIST2H2ACQ16777 129 aaPredicted RBP12.96□□□□□ -0.33
MSH6-214ENST00000616033 AP5B1Q2VPB7 878 aa12.96□□□□□ -0.33
MSH6-214ENST00000616033 CCBE1Q6UXH8 406 aaPredicted RBP12.96□□□□□ -0.33
MSH6-214ENST00000616033 FKBP9P1Q75LS8 142 aa12.96□□□□□ -0.33
MSH6-214ENST00000616033 MIB1Q86YT6 1006 aa12.96□□□□□ -0.33
MSH6-214ENST00000616033 TTC30BQ8N4P2 665 aa12.96□□□□□ -0.33
MSH6-214ENST00000616033 OR6Q1Q8NGQ2 317 aa12.96□□□□□ -0.33
MSH6-214ENST00000616033 KCNS3Q9BQ31 491 aa12.96□□□□□ -0.33
MSH6-214ENST00000616033 TTYH2Q9BSA4 534 aa12.96□□□□□ -0.33
MSH6-214ENST00000616033 AGO3Q9H9G7 860 aaKnown RBP12.96□□□□□ -0.33
MSH6-214ENST00000616033 POLR3BQ9NW08 1133 aaPredicted RBP12.96□□□□□ -0.33
MSH6-214ENST00000616033 SCN3BQ9NY72 215 aa12.96□□□□□ -0.33
MSH6-214ENST00000616033 GTF2IRD1Q9UHL9 959 aa12.96□□□□□ -0.33
MSH6-214ENST00000616033 PCDHB14Q9Y5E9 798 aa12.96□□□□□ -0.33
MSH6-214ENST00000616033 AP3D1O14617 1153 aa12.96□□□□□ -0.33
MSH6-214ENST00000616033 MATN3O15232 486 aa12.96□□□□□ -0.33
MSH6-214ENST00000616033 CSRP3P50461 194 aa12.96□□□□□ -0.33
MSH6-214ENST00000616033 SEMA3BQ13214 749 aa12.96□□□□□ -0.33
MSH6-214ENST00000616033 LRIT3Q3SXY7 679 aa12.96□□□□□ -0.33
MSH6-214ENST00000616033 ZNF484Q5JVG2 852 aa12.96□□□□□ -0.33
MSH6-214ENST00000616033 MARC1Q5VT66 337 aa12.96□□□□□ -0.33
MSH6-214ENST00000616033 LYPD8Q6UX82 237 aa12.96□□□□□ -0.33
MSH6-214ENST00000616033 MFSD4AQ8N468 514 aa12.96□□□□□ -0.33
MSH6-214ENST00000616033 KRTCAP2Q8N6L1 136 aa12.96□□□□□ -0.33
MSH6-214ENST00000616033 OR7G1Q8NGA0 311 aa12.96□□□□□ -0.33
MSH6-214ENST00000616033 SLC10A4Q96EP9 437 aa12.96□□□□□ -0.33
MSH6-214ENST00000616033 NECTIN4Q96NY8 510 aa12.96□□□□□ -0.33
MSH6-214ENST00000616033 APOL5Q9BWW9 433 aa12.96□□□□□ -0.33
MSH6-214ENST00000616033 ERVK13-1Q9NX77 482 aa12.96□□□□□ -0.33
MSH6-214ENST00000616033 MAGEL2Q9UJ55 1249 aa12.96□□□□□ -0.33
MSH6-214ENST00000616033 INTS6Q9UL03 887 aaKnown RBP12.96□□□□□ -0.33
MSH6-214ENST00000616033 NIPSNAP2O75323 286 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 SH3BGRLO75368 114 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 IGFBP5P24593 272 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 GDF5P43026 501 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 KCNC4Q03721 635 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 TAB1Q15750 504 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 PTPRNQ16849 979 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 RFTN2Q52LD8 501 aaPredicted RBP12.95□□□□□ -0.34
MSH6-214ENST00000616033 SIRPB2Q5JXA9 342 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 LAIR2Q6ISS4 152 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 PROSER1Q86XN7 944 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 RIOX2Q8IUF8 465 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 SIDT2Q8NBJ9 832 aaKnown RBP12.95□□□□□ -0.34
MSH6-214ENST00000616033 BPIFB1Q8TDL5 484 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 TMEM40Q8WWA1 233 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 PYCR2Q96C36 320 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 SLC2A13Q96QE2 648 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 CTRCQ99895 268 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 CHCHD6Q9BRQ6 235 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 YTHDF1Q9BYJ9 559 aaKnown RBP12.95□□□□□ -0.34
MSH6-214ENST00000616033 AIG1Q9NVV5 245 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 PCDH10Q9P2E7 1040 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 KLHL3Q9UH77 587 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 TRIM64A6NGJ6 449 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 M0R129 80 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 NDUFS3O75489 264 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 CD4P01730 458 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 CCNCP24863 283 aa12.95□□□□□ -0.34
MSH6-214ENST00000616033 KANK2Q63ZY3 851 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms