RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 CBSLP0DN79 551 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 CBSP35520 551 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 ATP1A2P50993 1020 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 PGGT1BP53609 377 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 CTSCP53634 463 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 WDR4P57081 412 aaKnown RBP11.23□□□□□ -0.61
SLIRP-212ENST00000613856 ATP6V0D1P61421 351 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 CYP4F3Q08477 520 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 DLG1Q12959 904 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 GRIK2Q13002 908 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 GBX1Q14549 363 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 INPP5AQ14642 412 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 TTLL9Q3SXZ7 439 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 LRRC8EQ6NSJ5 796 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 KLC3Q6P597 504 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 PAQR3Q6TCH7 311 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 SLC36A4Q6YBV0 504 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 TRIM74Q86UV6 250 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 PLD6Q8N2A8 252 aaKnown RBP11.23□□□□□ -0.61
SLIRP-212ENST00000613856 ZBTB2Q8N680 514 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 ANKRD42Q8N9B4 389 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 SIDT2Q8NBJ9 832 aaKnown RBP11.23□□□□□ -0.61
SLIRP-212ENST00000613856 TMEM145Q8NBT3 493 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 CADM4Q8NFZ8 388 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 FAM174AQ8TBP5 190 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 ANKRD49Q8WVL7 239 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 FUBP1Q96AE4 644 aaKnown RBP11.23□□□□□ -0.61
SLIRP-212ENST00000613856 PDLIM5Q96HC4 596 aaKnown RBP11.23□□□□□ -0.61
SLIRP-212ENST00000613856 LINC00615Q96LM1 132 aaPredicted RBP11.23□□□□□ -0.61
SLIRP-212ENST00000613856 FAM111AQ96PZ2 611 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 SLC30A3Q99726 388 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 GPR174Q9BXC1 333 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 DERL2Q9GZP9 239 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 OR2AG1Q9H205 316 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 NMRAL1Q9HBL8 299 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 INTS9Q9NV88 658 aaKnown RBP11.23□□□□□ -0.61
SLIRP-212ENST00000613856 SLC17A7Q9P2U7 560 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 ATXN10Q9UBB4 475 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 MID2Q9UJV3 735 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 GPR34Q9UPC5 381 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.23□□□□□ -0.61
SLIRP-212ENST00000613856 HS3ST3A1Q9Y663 406 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 SLCO1B1Q9Y6L6 691 aa11.23□□□□□ -0.61
SLIRP-212ENST00000613856 TP53BP1Q12888 1972 aaPredicted RBP11.23□□□□□ -0.61
SLIRP-212ENST00000613856 KALRNO60229 2985 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 KLHL33A6NCF5 533 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 A6NNZ2 444 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 PRAMEF26H0Y7S4 382 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 CACNB4O00305 520 aaPredicted RBP11.22□□□□□ -0.61
SLIRP-212ENST00000613856 NUAK1O60285 661 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 ENO3P13929 434 aaPredicted RBP11.22□□□□□ -0.61
SLIRP-212ENST00000613856 CD1DP15813 335 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 ZNF8P17098 575 aaPredicted RBP11.22□□□□□ -0.61
SLIRP-212ENST00000613856 AOAHP28039 575 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 HOXD12P35452 270 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 GMPRP36959 345 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 MDH1P40925 334 aaKnown RBP11.22□□□□□ -0.61
SLIRP-212ENST00000613856 RGS4P49798 205 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 IL2P60568 153 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 PFN3P60673 137 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 YPEL5P62699 121 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 BNC1Q01954 994 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 CSHL1Q14406 222 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 ACAP2Q15057 778 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 SEPT7Q16181 437 aaKnown RBP11.22□□□□□ -0.61
SLIRP-212ENST00000613856 TUBB8Q3ZCM7 444 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 ZNF658BQ4V348 819 aaPredicted RBP11.22□□□□□ -0.61
SLIRP-212ENST00000613856 TECRLQ5HYJ1 363 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 PLEKHS1Q5SXH7 462 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 ZNF648Q5T619 568 aaPredicted RBP11.22□□□□□ -0.61
SLIRP-212ENST00000613856 LVRNQ6Q4G3 990 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 TMEM220Q6QAJ8 160 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 GCNT7Q6ZNI0 430 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 DET1Q7L5Y6 550 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 OTOAQ7RTW8 1153 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 ABI3BPQ7Z7G0 1075 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 CPNE9Q8IYJ1 553 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 OXR1Q8N573 874 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 RHEBL1Q8TAI7 183 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 CEP76Q8TAP6 659 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 RDH11Q8TC12 318 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 FOXJ1Q92949 421 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 BIRC7Q96CA5 298 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 NXNL1Q96CM4 212 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 SGF29Q96ES7 293 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 MRPL57Q9BQC6 102 aaKnown RBP11.22□□□□□ -0.61
SLIRP-212ENST00000613856 CCM2Q9BSQ5 444 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 APOOQ9BUR5 198 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 MRPL46Q9H2W6 279 aaKnown RBP11.22□□□□□ -0.61
SLIRP-212ENST00000613856 RMI1Q9H9A7 625 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 FZD3Q9NPG1 666 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 TMEM216Q9P0N5 145 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 GALPQ9UBC7 116 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 PCOLCE2Q9UKZ9 415 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 SLC17A4Q9Y2C5 497 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 DNMT3AQ9Y6K1 912 aaPredicted RBP11.22□□□□□ -0.61
SLIRP-212ENST00000613856 TENM4Q6N022 2769 aa11.22□□□□□ -0.61
SLIRP-212ENST00000613856 C17orf113A0A1B0GUU1 675 aa11.21□□□□□ -0.61
SLIRP-212ENST00000613856 A0A1W2PPC4 97 aa11.21□□□□□ -0.61
SLIRP-212ENST00000613856 OR2AG2A6NM03 316 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms