RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 FAM221BA6H8Z2 402 aa16.23■□□□□ 0.19
IRF1-211ENST00000613424 IFRD1O00458 451 aaPredicted RBP16.23■□□□□ 0.19
IRF1-211ENST00000613424 NIPSNAP2O75323 286 aa16.23■□□□□ 0.19
IRF1-211ENST00000613424 GPC4O75487 556 aa16.23■□□□□ 0.19
IRF1-211ENST00000613424 TCEA3O75764 348 aa16.23■□□□□ 0.19
IRF1-211ENST00000613424 AHSGP02765 367 aa16.23■□□□□ 0.19
IRF1-211ENST00000613424 RHOXF2BP0C7M4 288 aa16.23■□□□□ 0.19
IRF1-211ENST00000613424 CHRM3P20309 590 aa16.23■□□□□ 0.19
IRF1-211ENST00000613424 GABRB3P28472 473 aa16.23■□□□□ 0.19
IRF1-211ENST00000613424 PLOD1Q02809 727 aaPredicted RBP16.23■□□□□ 0.19
IRF1-211ENST00000613424 HSPA14Q0VDF9 509 aa16.23■□□□□ 0.19
IRF1-211ENST00000613424 SPIDRQ14159 915 aa16.23■□□□□ 0.19
IRF1-211ENST00000613424 SYTL3Q4VX76 610 aa16.23■□□□□ 0.19
IRF1-211ENST00000613424 NKAIN2Q5VXU1 208 aa16.23■□□□□ 0.19
IRF1-211ENST00000613424 DUS1LQ6P1R4 473 aaKnown RBP16.23■□□□□ 0.19
IRF1-211ENST00000613424 KIAA0408Q6ZU52 694 aa16.23■□□□□ 0.19
IRF1-211ENST00000613424 C3orf62Q6ZUJ4 267 aa16.23■□□□□ 0.19
IRF1-211ENST00000613424 USP53Q70EK8 1073 aa16.23■□□□□ 0.19
IRF1-211ENST00000613424 RBM12BQ8IXT5 1001 aaKnown RBP16.23■□□□□ 0.19
IRF1-211ENST00000613424 CACTIN-AS1Q8N1I8 211 aa16.23■□□□□ 0.19
IRF1-211ENST00000613424 ASZ1Q8WWH4 475 aa16.23■□□□□ 0.19
IRF1-211ENST00000613424 GFM1Q96RP9 751 aaKnown RBP16.23■□□□□ 0.19
IRF1-211ENST00000613424 RHOXF2Q9BQY4 288 aa16.23■□□□□ 0.19
IRF1-211ENST00000613424 TBC1D10AQ9BXI6 508 aa16.23■□□□□ 0.19
IRF1-211ENST00000613424 LATS2Q9NRM7 1088 aa16.23■□□□□ 0.19
IRF1-211ENST00000613424 SLC17A6Q9P2U8 582 aa16.23■□□□□ 0.19
IRF1-211ENST00000613424 GALPQ9UBC7 116 aa16.23■□□□□ 0.19
IRF1-211ENST00000613424 ATXN7L1Q9ULK2 861 aaPredicted RBP16.23■□□□□ 0.19
IRF1-211ENST00000613424 CLCA2Q9UQC9 943 aa16.23■□□□□ 0.19
IRF1-211ENST00000613424 CDYLQ9Y232 598 aa16.23■□□□□ 0.19
IRF1-211ENST00000613424 UNC13CQ8NB66 2214 aa16.23■□□□□ 0.19
IRF1-211ENST00000613424 KPNA5O15131 536 aa16.22■□□□□ 0.19
IRF1-211ENST00000613424 APOA4P06727 396 aa16.22■□□□□ 0.19
IRF1-211ENST00000613424 ACADLP28330 430 aa16.22■□□□□ 0.19
IRF1-211ENST00000613424 ECHS1P30084 290 aa16.22■□□□□ 0.19
IRF1-211ENST00000613424 GPX6P59796 221 aa16.22■□□□□ 0.19
IRF1-211ENST00000613424 GPLD1P80108 840 aa16.22■□□□□ 0.19
IRF1-211ENST00000613424 MGAT5Q09328 741 aa16.22■□□□□ 0.19
IRF1-211ENST00000613424 TARDBPQ13148 414 aaKnown RBP eCLIP16.22■□□□□ 0.19
IRF1-211ENST00000613424 SQSTM1Q13501 440 aa16.22■□□□□ 0.19
IRF1-211ENST00000613424 GPR18Q14330 331 aa16.22■□□□□ 0.19
IRF1-211ENST00000613424 RBM44Q6ZP01 1051 aaKnown RBP16.22■□□□□ 0.19
IRF1-211ENST00000613424 OTOAQ7RTW8 1153 aa16.22■□□□□ 0.19
IRF1-211ENST00000613424 GALNT7Q86SF2 657 aa16.22■□□□□ 0.19
IRF1-211ENST00000613424 PDZD3Q86UT5 571 aa16.22■□□□□ 0.19
IRF1-211ENST00000613424 VRK3Q8IV63 474 aa16.22■□□□□ 0.19
IRF1-211ENST00000613424 DCBLD1Q8N8Z6 715 aa16.22■□□□□ 0.19
IRF1-211ENST00000613424 PHC3Q8NDX5 983 aa16.22■□□□□ 0.19
IRF1-211ENST00000613424 TFGQ92734 400 aaPredicted RBP16.22■□□□□ 0.19
IRF1-211ENST00000613424 FAM136AQ96C01 138 aa16.22■□□□□ 0.19
IRF1-211ENST00000613424 FERD3LQ96RJ6 166 aa16.22■□□□□ 0.19
IRF1-211ENST00000613424 CCDC68Q9H2F9 335 aa16.22■□□□□ 0.19
IRF1-211ENST00000613424 LRRC4CQ9HCJ2 640 aa16.22■□□□□ 0.19
IRF1-211ENST00000613424 MTRF1LQ9UGC7 380 aaKnown RBP16.22■□□□□ 0.19
IRF1-211ENST00000613424 HEBP2Q9Y5Z4 205 aa16.22■□□□□ 0.19
IRF1-211ENST00000613424 COLEC10Q9Y6Z7 277 aa16.22■□□□□ 0.19
IRF1-211ENST00000613424 LILRA5A6NI73 299 aa16.21■□□□□ 0.19
IRF1-211ENST00000613424 E5RI56 91 aa16.21■□□□□ 0.19
IRF1-211ENST00000613424 SLCO2B1O94956 709 aa16.21■□□□□ 0.19
IRF1-211ENST00000613424 CPNE6O95741 557 aa16.21■□□□□ 0.19
IRF1-211ENST00000613424 GSTA2P09210 222 aa16.21■□□□□ 0.19
IRF1-211ENST00000613424 EPHA4P54764 986 aa16.21■□□□□ 0.19
IRF1-211ENST00000613424 SHC2P98077 582 aa16.21■□□□□ 0.19
IRF1-211ENST00000613424 CFHR1Q03591 330 aa16.21■□□□□ 0.19
IRF1-211ENST00000613424 CUL1Q13616 776 aa16.21■□□□□ 0.19
IRF1-211ENST00000613424 KRT33BQ14525 404 aa16.21■□□□□ 0.19
IRF1-211ENST00000613424 PLEKHS1Q5SXH7 462 aa16.21■□□□□ 0.19
IRF1-211ENST00000613424 CCNI2Q6ZMN8 369 aaPredicted RBP16.21■□□□□ 0.19
IRF1-211ENST00000613424 CYS1Q717R9 158 aa16.21■□□□□ 0.19
IRF1-211ENST00000613424 TMPRSS9Q7Z410 1059 aa16.21■□□□□ 0.19
IRF1-211ENST00000613424 PIM3Q86V86 326 aa16.21■□□□□ 0.19
IRF1-211ENST00000613424 IFT20Q8IY31 132 aa16.21■□□□□ 0.19
IRF1-211ENST00000613424 SLC22A15Q8IZD6 547 aa16.21■□□□□ 0.19
IRF1-211ENST00000613424 OR10G6Q8NH81 332 aa16.21■□□□□ 0.19
IRF1-211ENST00000613424 ZFPM2Q8WW38 1151 aa16.21■□□□□ 0.19
IRF1-211ENST00000613424 AHCYL2Q96HN2 611 aaKnown RBP16.21■□□□□ 0.19
IRF1-211ENST00000613424 DEPDC7Q96QD5 511 aa16.21■□□□□ 0.19
IRF1-211ENST00000613424 AARSD1Q9BTE6 412 aaKnown RBP16.21■□□□□ 0.19
IRF1-211ENST00000613424 RDH14Q9HBH5 336 aa16.21■□□□□ 0.19
IRF1-211ENST00000613424 SMYD2Q9NRG4 433 aa16.21■□□□□ 0.19
IRF1-211ENST00000613424 ZFATQ9P243 1243 aa16.21■□□□□ 0.19
IRF1-211ENST00000613424 ANGPTL2Q9UKU9 493 aa16.21■□□□□ 0.19
IRF1-211ENST00000613424 MED16Q9Y2X0 877 aa16.21■□□□□ 0.19
IRF1-211ENST00000613424 NEUROG3Q9Y4Z2 214 aa16.21■□□□□ 0.19
IRF1-211ENST00000613424 COMMD10Q9Y6G5 202 aa16.21■□□□□ 0.19
IRF1-211ENST00000613424 KNTC1P50748 2209 aa16.21■□□□□ 0.18
IRF1-211ENST00000613424 COL27A1Q8IZC6 1860 aaPredicted RBP16.2■□□□□ 0.18
IRF1-211ENST00000613424 D6RAR5 112 aa16.2■□□□□ 0.18
IRF1-211ENST00000613424 CSO75390 466 aaKnown RBP16.2■□□□□ 0.18
IRF1-211ENST00000613424 UBXN7O94888 489 aa16.2■□□□□ 0.18
IRF1-211ENST00000613424 NDUFS1P28331 727 aa16.2■□□□□ 0.18
IRF1-211ENST00000613424 ABCG1P45844 678 aa16.2■□□□□ 0.18
IRF1-211ENST00000613424 MAPK9P45984 424 aa16.2■□□□□ 0.18
IRF1-211ENST00000613424 PPM1FP49593 454 aaPredicted RBP16.2■□□□□ 0.18
IRF1-211ENST00000613424 CLCN7P51798 805 aa16.2■□□□□ 0.18
IRF1-211ENST00000613424 PDX1P52945 283 aa16.2■□□□□ 0.18
IRF1-211ENST00000613424 ABRQ12979 859 aa16.2■□□□□ 0.18
IRF1-211ENST00000613424 TMED2Q15363 201 aa16.2■□□□□ 0.18
IRF1-211ENST00000613424 ISXQ2M1V0 245 aa16.2■□□□□ 0.18
IRF1-211ENST00000613424 ZNF574Q6ZN55 896 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms