RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 JPH3Q8WXH2 748 aaPredicted RBP10.69□□□□□ -0.7
FAM3A-221ENST00000612856 NKD2Q969F2 451 aaPredicted RBP10.69□□□□□ -0.7
FAM3A-221ENST00000612856 PLD4Q96BZ4 506 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 RIOK2Q9BVS4 552 aaKnown RBP10.69□□□□□ -0.7
FAM3A-221ENST00000612856 OSBPL11Q9BXB4 747 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 CARS2Q9HA77 564 aaKnown RBP10.69□□□□□ -0.7
FAM3A-221ENST00000612856 NSMCE4AQ9NXX6 385 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 MGAT4DA6NG13 374 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 CHADO15335 359 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 GPR39O43194 453 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 NIPSNAP2O75323 286 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 LEFTY1O75610 366 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 GOT2P00505 430 aaKnown RBP10.69□□□□□ -0.7
FAM3A-221ENST00000612856 CAPN1P07384 714 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 ATF6P18850 670 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 ALAS2P22557 587 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 GRK2P25098 689 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 ARCN1P48444 511 aaKnown RBP10.69□□□□□ -0.7
FAM3A-221ENST00000612856 SLC18A1P54219 525 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 ABCE1P61221 599 aaKnown RBP10.69□□□□□ -0.7
FAM3A-221ENST00000612856 SF1Q15637 639 aaKnown RBP10.69□□□□□ -0.7
FAM3A-221ENST00000612856 Q6ZNX1 250 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 SLC15A4Q8N697 577 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 ZNF781Q8N8C0 355 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 SPPL3Q8TCT6 385 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 IL12RB2Q99665 862 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 SMAD5Q99717 465 aaKnown RBP10.69□□□□□ -0.7
FAM3A-221ENST00000612856 C1orf50Q9BV19 199 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 SLC25A51Q9H1U9 297 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 NSUN3Q9H649 340 aaKnown RBP10.69□□□□□ -0.7
FAM3A-221ENST00000612856 PAK6Q9NQU5 681 aaPredicted RBP10.69□□□□□ -0.7
FAM3A-221ENST00000612856 OSER1Q9NX31 292 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 POU2F3Q9UKI9 436 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 CDYLQ9Y232 598 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 VWA7Q9Y334 891 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 FAM32AQ9Y421 112 aaKnown RBP10.69□□□□□ -0.7
FAM3A-221ENST00000612856 ARIH1Q9Y4X5 557 aaPredicted RBP10.69□□□□□ -0.7
FAM3A-221ENST00000612856 TIMM22Q9Y584 194 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 RTTNQ86VV8 2226 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 RLFQ13129 1914 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 MAGEB16A2A368 324 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 CAPN14A8MX76 684 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 PRMT5O14744 637 aaPredicted RBP10.69□□□□□ -0.7
FAM3A-221ENST00000612856 SMAD6O43541 496 aaKnown RBP10.69□□□□□ -0.7
FAM3A-221ENST00000612856 SEC22BO75396 215 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 HLA-DPA1P20036 260 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 CTSOP43234 321 aaPredicted RBP10.69□□□□□ -0.7
FAM3A-221ENST00000612856 GSSP48637 474 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 BMXP51813 675 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 EMP3P54852 163 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 COPZ1P61923 177 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 SLC10A2Q12908 348 aaPredicted RBP10.69□□□□□ -0.7
FAM3A-221ENST00000612856 GRM3Q14832 879 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 SLC9B1Q4ZJI4 515 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 ANKS6Q68DC2 871 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 SERPINA9Q86WD7 417 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 PQLC3Q8N755 202 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 FNDC5Q8NAU1 212 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 OR2AP1Q8NGE2 309 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 BCL7CQ8WUZ0 217 aaPredicted RBP10.69□□□□□ -0.7
FAM3A-221ENST00000612856 OR52B2Q96RD2 323 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 NAA50Q9GZZ1 169 aaKnown RBP10.69□□□□□ -0.7
FAM3A-221ENST00000612856 ITM2CQ9NQX7 267 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 POLR3BQ9NW08 1133 aaPredicted RBP10.69□□□□□ -0.7
FAM3A-221ENST00000612856 MARCH5Q9NX47 278 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 TRPC4Q9UBN4 977 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 MRPS17Q9Y2R5 130 aaKnown RBP10.69□□□□□ -0.7
FAM3A-221ENST00000612856 SQORQ9Y6N5 450 aa10.69□□□□□ -0.7
FAM3A-221ENST00000612856 KIF13BQ9NQT8 1826 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 NR5A2O00482 541 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 SDC3O75056 442 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 ERAL1O75616 437 aaKnown RBP10.68□□□□□ -0.7
FAM3A-221ENST00000612856 GJB3O75712 270 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 PRAMEF12O95522 483 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 NAT1P18440 290 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 CDH5P33151 784 aaPredicted RBP10.68□□□□□ -0.7
FAM3A-221ENST00000612856 SPANXN3Q5MJ09 141 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 IL27RAQ6UWB1 636 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 PAQR9Q6ZVX9 377 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 KCTD8Q6ZWB6 473 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 RPS27LQ71UM5 84 aaKnown RBP10.68□□□□□ -0.7
FAM3A-221ENST00000612856 GATAD2AQ86YP4 633 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 BEND7Q8N7W2 519 aaPredicted RBP10.68□□□□□ -0.7
FAM3A-221ENST00000612856 RAD21L1Q9H4I0 556 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 TMEM30AQ9NV96 361 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 IGSF9Q9P2J2 1179 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 TRIP11Q15643 1979 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 NUP205Q92621 2012 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 CCDC162PA2VCL2 907 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 RGSL1A5PLK6 1076 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 BIRC5O15392 142 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 ALBP02768 609 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 AOC1P19801 751 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 NAE1Q13564 534 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 TBC1D19Q8N5T2 526 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 CHST14Q8NCH0 376 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 C2orf15Q8WU43 125 aaKnown RBP10.68□□□□□ -0.7
FAM3A-221ENST00000612856 KCTD13Q8WZ19 329 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 PIGKQ92643 395 aa10.68□□□□□ -0.7
FAM3A-221ENST00000612856 SDCCAG3Q96C92 435 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms