RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 RNF214Q8ND24 703 aa13.03□□□□□ -0.32
POLR2J3-219ENST00000608621 OR8K5Q8NH50 307 aa13.03□□□□□ -0.32
POLR2J3-219ENST00000608621 ACTL9Q8TC94 416 aa13.03□□□□□ -0.32
POLR2J3-219ENST00000608621 FERD3LQ96RJ6 166 aa13.03□□□□□ -0.32
POLR2J3-219ENST00000608621 CCM2Q9BSQ5 444 aa13.03□□□□□ -0.32
POLR2J3-219ENST00000608621 CHST8Q9H2A9 424 aa13.03□□□□□ -0.32
POLR2J3-219ENST00000608621 TSPY26PQ9H489 355 aa13.03□□□□□ -0.32
POLR2J3-219ENST00000608621 FAM96AQ9H5X1 160 aa13.03□□□□□ -0.32
POLR2J3-219ENST00000608621 CRLS1Q9UJA2 301 aa13.03□□□□□ -0.32
POLR2J3-219ENST00000608621 BTRCQ9Y297 605 aa13.03□□□□□ -0.32
POLR2J3-219ENST00000608621 AAR2Q9Y312 384 aaKnown RBP13.03□□□□□ -0.32
POLR2J3-219ENST00000608621 PCDHA13Q9Y5I0 950 aa13.03□□□□□ -0.32
POLR2J3-219ENST00000608621 RELNP78509 3460 aa13.03□□□□□ -0.32
POLR2J3-219ENST00000608621 CCDC66A2RUB6 948 aa13.02□□□□□ -0.33
POLR2J3-219ENST00000608621 TTLL8A6PVC2 850 aa13.02□□□□□ -0.33
POLR2J3-219ENST00000608621 LCA5LO95447 670 aa13.02□□□□□ -0.33
POLR2J3-219ENST00000608621 CRTAMO95727 393 aa13.02□□□□□ -0.33
POLR2J3-219ENST00000608621 RALBP11234 206 aa13.02□□□□□ -0.33
POLR2J3-219ENST00000608621 GP1BBP13224 206 aa13.02□□□□□ -0.33
POLR2J3-219ENST00000608621 PSMB4P28070 264 aa13.02□□□□□ -0.33
POLR2J3-219ENST00000608621 COPS2P61201 443 aa13.02□□□□□ -0.33
POLR2J3-219ENST00000608621 OTUD4Q01804 1114 aaKnown RBP13.02□□□□□ -0.33
POLR2J3-219ENST00000608621 PRKAA1Q13131 559 aa13.02□□□□□ -0.33
POLR2J3-219ENST00000608621 IL10RAQ13651 578 aa13.02□□□□□ -0.33
POLR2J3-219ENST00000608621 SKOR2Q2VWA4 1001 aaPredicted RBP13.02□□□□□ -0.33
POLR2J3-219ENST00000608621 PLEKHS1Q5SXH7 462 aa13.02□□□□□ -0.33
POLR2J3-219ENST00000608621 CPZQ66K79 652 aa13.02□□□□□ -0.33
POLR2J3-219ENST00000608621 C11orf63Q6NUN7 778 aa13.02□□□□□ -0.33
POLR2J3-219ENST00000608621 ZNF517Q6ZMY9 492 aaPredicted RBP13.02□□□□□ -0.33
POLR2J3-219ENST00000608621 CARFQ8N187 725 aa13.02□□□□□ -0.33
POLR2J3-219ENST00000608621 HM13Q8TCT9 377 aa13.02□□□□□ -0.33
POLR2J3-219ENST00000608621 FERMT1Q9BQL6 677 aa13.02□□□□□ -0.33
POLR2J3-219ENST00000608621 SLC25A23Q9BV35 468 aa13.02□□□□□ -0.33
POLR2J3-219ENST00000608621 TLR10Q9BXR5 811 aa13.02□□□□□ -0.33
POLR2J3-219ENST00000608621 ACSS2Q9NR19 701 aa13.02□□□□□ -0.33
POLR2J3-219ENST00000608621 LATS2Q9NRM7 1088 aa13.02□□□□□ -0.33
POLR2J3-219ENST00000608621 C1GALT1Q9NS00 363 aa13.02□□□□□ -0.33
POLR2J3-219ENST00000608621 HEBP2Q9Y5Z4 205 aa13.02□□□□□ -0.33
POLR2J3-219ENST00000608621 C17orf113A0A1B0GUU1 675 aa13.01□□□□□ -0.33
POLR2J3-219ENST00000608621 MEN1O00255 615 aa13.01□□□□□ -0.33
POLR2J3-219ENST00000608621 KCNN4O15554 427 aa13.01□□□□□ -0.33
POLR2J3-219ENST00000608621 RBP3P10745 1247 aa13.01□□□□□ -0.33
POLR2J3-219ENST00000608621 ATP1B2P14415 290 aaPredicted RBP13.01□□□□□ -0.33
POLR2J3-219ENST00000608621 PRDX3P30048 256 aaKnown RBP13.01□□□□□ -0.33
POLR2J3-219ENST00000608621 PRLHRP49683 370 aa13.01□□□□□ -0.33
POLR2J3-219ENST00000608621 GSDMDP57764 484 aa13.01□□□□□ -0.33
POLR2J3-219ENST00000608621 EIF3EP60228 445 aaKnown RBP13.01□□□□□ -0.33
POLR2J3-219ENST00000608621 SPARCL1Q14515 664 aa13.01□□□□□ -0.33
POLR2J3-219ENST00000608621 IZUMO3Q5VZ72 239 aa13.01□□□□□ -0.33
POLR2J3-219ENST00000608621 DENND5AQ6IQ26 1287 aa13.01□□□□□ -0.33
POLR2J3-219ENST00000608621 DARS2Q6PI48 645 aaKnown RBP13.01□□□□□ -0.33
POLR2J3-219ENST00000608621 SNX20Q7Z614 316 aa13.01□□□□□ -0.33
POLR2J3-219ENST00000608621 DSELQ8IZU8 1212 aa13.01□□□□□ -0.33
POLR2J3-219ENST00000608621 NXPE1Q8N323 547 aa13.01□□□□□ -0.33
POLR2J3-219ENST00000608621 TC2NQ8N9U0 490 aa13.01□□□□□ -0.33
POLR2J3-219ENST00000608621 PHC3Q8NDX5 983 aa13.01□□□□□ -0.33
POLR2J3-219ENST00000608621 ACVR1CQ8NER5 493 aa13.01□□□□□ -0.33
POLR2J3-219ENST00000608621 LCN9Q8WX39 176 aa13.01□□□□□ -0.33
POLR2J3-219ENST00000608621 CPT1BQ92523 772 aa13.01□□□□□ -0.33
POLR2J3-219ENST00000608621 ULK4Q96C45 1275 aa13.01□□□□□ -0.33
POLR2J3-219ENST00000608621 CLIP3Q96DZ5 547 aa13.01□□□□□ -0.33
POLR2J3-219ENST00000608621 LRFN5Q96NI6 719 aa13.01□□□□□ -0.33
POLR2J3-219ENST00000608621 COPS8Q99627 209 aa13.01□□□□□ -0.33
POLR2J3-219ENST00000608621 NRTNQ99748 197 aa13.01□□□□□ -0.33
POLR2J3-219ENST00000608621 FAM118BQ9BPY3 351 aa13.01□□□□□ -0.33
POLR2J3-219ENST00000608621 ING2Q9H160 280 aa13.01□□□□□ -0.33
POLR2J3-219ENST00000608621 SRMSQ9H3Y6 488 aa13.01□□□□□ -0.33
POLR2J3-219ENST00000608621 MLXIPLQ9NP71 852 aa13.01□□□□□ -0.33
POLR2J3-219ENST00000608621 POMT2Q9UKY4 750 aa13.01□□□□□ -0.33
POLR2J3-219ENST00000608621 PCDHGA9Q9Y5G4 932 aaKnown RBP13.01□□□□□ -0.33
POLR2J3-219ENST00000608621 PCDHA3Q9Y5H8 950 aa13.01□□□□□ -0.33
POLR2J3-219ENST00000608621 SEC16AO15027 2179 aa13□□□□□ -0.33
POLR2J3-219ENST00000608621 MACROD2A1Z1Q3 448 aa13□□□□□ -0.33
POLR2J3-219ENST00000608621 GSAPA4D1B5 854 aa13□□□□□ -0.33
POLR2J3-219ENST00000608621 BLACEA4D250 179 aa13□□□□□ -0.33
POLR2J3-219ENST00000608621 TMEM150CB9EJG8 249 aa13□□□□□ -0.33
POLR2J3-219ENST00000608621 CFAP99D6REC4 459 aa13□□□□□ -0.33
POLR2J3-219ENST00000608621 BTN3A3O00478 584 aa13□□□□□ -0.33
POLR2J3-219ENST00000608621 CCL22O00626 93 aa13□□□□□ -0.33
POLR2J3-219ENST00000608621 VPS4BO75351 444 aa13□□□□□ -0.33
POLR2J3-219ENST00000608621 STK10O94804 968 aaKnown RBP13□□□□□ -0.33
POLR2J3-219ENST00000608621 RAB40ALP0C0E4 278 aa13□□□□□ -0.33
POLR2J3-219ENST00000608621 ITGALP20701 1170 aa13□□□□□ -0.33
POLR2J3-219ENST00000608621 CTNNA2P26232 953 aa13□□□□□ -0.33
POLR2J3-219ENST00000608621 PDHA2P29803 388 aa13□□□□□ -0.33
POLR2J3-219ENST00000608621 HADHAP40939 763 aa13□□□□□ -0.33
POLR2J3-219ENST00000608621 PTGIRP43119 386 aa13□□□□□ -0.33
POLR2J3-219ENST00000608621 PREPP48147 710 aa13□□□□□ -0.33
POLR2J3-219ENST00000608621 CDKN1CP49918 316 aaPredicted RBP13□□□□□ -0.33
POLR2J3-219ENST00000608621 PGDP52209 483 aa13□□□□□ -0.33
POLR2J3-219ENST00000608621 ABRQ12979 859 aa13□□□□□ -0.33
POLR2J3-219ENST00000608621 SPA17Q15506 151 aa13□□□□□ -0.33
POLR2J3-219ENST00000608621 NADK2Q4G0N4 442 aa13□□□□□ -0.33
POLR2J3-219ENST00000608621 FAM69BQ5VUD6 431 aa13□□□□□ -0.33
POLR2J3-219ENST00000608621 MICALCLQ6ZW33 695 aa13□□□□□ -0.33
POLR2J3-219ENST00000608621 CDKL3Q8IVW4 592 aaPredicted RBP13□□□□□ -0.33
POLR2J3-219ENST00000608621 EFCAB3Q8N7B9 438 aa13□□□□□ -0.33
POLR2J3-219ENST00000608621 ENDOVQ8N8Q3 282 aaKnown RBP13□□□□□ -0.33
POLR2J3-219ENST00000608621 OR1L3Q8NH93 324 aa13□□□□□ -0.33
POLR2J3-219ENST00000608621 CCDC110Q8TBZ0 833 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms