RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 SMOXQ9NWM0 555 aa18.81■□□□□ 0.6
SGMS1-208ENST00000608287 TRMT1Q9NXH9 659 aaKnown RBP18.81■□□□□ 0.6
SGMS1-208ENST00000608287 PAK5Q9P286 719 aa18.81■□□□□ 0.6
SGMS1-208ENST00000608287 CROTQ9UKG9 612 aa18.81■□□□□ 0.6
SGMS1-208ENST00000608287 DRG1Q9Y295 367 aaKnown RBP18.81■□□□□ 0.6
SGMS1-208ENST00000608287 PCDHGB7Q9Y5F8 929 aa18.81■□□□□ 0.6
SGMS1-208ENST00000608287 PCDHGA9Q9Y5G4 932 aaKnown RBP18.81■□□□□ 0.6
SGMS1-208ENST00000608287 MRPS18BQ9Y676 258 aaKnown RBP18.81■□□□□ 0.6
SGMS1-208ENST00000608287 SHANK1Q9Y566 2161 aa18.81■□□□□ 0.6
SGMS1-208ENST00000608287 CDC14CA4D256 554 aa18.8■□□□□ 0.6
SGMS1-208ENST00000608287 A6NCN8 305 aa18.8■□□□□ 0.6
SGMS1-208ENST00000608287 CCL22O00626 93 aa18.8■□□□□ 0.6
SGMS1-208ENST00000608287 KRT38O76015 456 aa18.8■□□□□ 0.6
SGMS1-208ENST00000608287 ZSCAN5DPP0CG00 497 aa18.8■□□□□ 0.6
SGMS1-208ENST00000608287 VCLP18206 1134 aa18.8■□□□□ 0.6
SGMS1-208ENST00000608287 MSH3P20585 1137 aa18.8■□□□□ 0.6
SGMS1-208ENST00000608287 XIAPP98170 497 aa18.8■□□□□ 0.6
SGMS1-208ENST00000608287 HHEXQ03014 270 aa18.8■□□□□ 0.6
SGMS1-208ENST00000608287 NFATC2Q13469 925 aa18.8■□□□□ 0.6
SGMS1-208ENST00000608287 SEMA5AQ13591 1074 aa18.8■□□□□ 0.6
SGMS1-208ENST00000608287 SLC9B2Q86UD5 537 aa18.8■□□□□ 0.6
SGMS1-208ENST00000608287 ZNF761Q86XN6 746 aaPredicted RBP18.8■□□□□ 0.6
SGMS1-208ENST00000608287 THAP4Q8WY91 577 aa18.8■□□□□ 0.6
SGMS1-208ENST00000608287 DNAJC1Q96KC8 554 aaKnown RBP18.8■□□□□ 0.6
SGMS1-208ENST00000608287 CRLS1Q9UJA2 301 aa18.8■□□□□ 0.6
SGMS1-208ENST00000608287 PCDHGA6Q9Y5G7 932 aa18.8■□□□□ 0.6
SGMS1-208ENST00000608287 SLC30A1Q9Y6M5 507 aa18.8■□□□□ 0.6
SGMS1-208ENST00000608287 KIR2DS5A0A0G2JLQ3 304 aa18.79■□□□□ 0.6
SGMS1-208ENST00000608287 A0A0G2JNG1 304 aa18.79■□□□□ 0.6
SGMS1-208ENST00000608287 OR2AG2A6NM03 316 aa18.79■□□□□ 0.6
SGMS1-208ENST00000608287 OR5K4A6NMS3 321 aa18.79■□□□□ 0.6
SGMS1-208ENST00000608287 PDZK1P1A8MUH7 402 aa18.79■□□□□ 0.6
SGMS1-208ENST00000608287 KIR2DS3K7RE56 304 aa18.79■□□□□ 0.6
SGMS1-208ENST00000608287 KATNA1O75449 491 aa18.79■□□□□ 0.6
SGMS1-208ENST00000608287 CREG1O75629 220 aa18.79■□□□□ 0.6
SGMS1-208ENST00000608287 SORBS2O94875 1100 aaKnown RBP18.79■□□□□ 0.6
SGMS1-208ENST00000608287 GAS8O95995 478 aa18.79■□□□□ 0.6
SGMS1-208ENST00000608287 ANKRD34CP0C6C1 535 aa18.79■□□□□ 0.6
SGMS1-208ENST00000608287 ITGALP20701 1170 aa18.79■□□□□ 0.6
SGMS1-208ENST00000608287 MC4RP32245 332 aa18.79■□□□□ 0.6
SGMS1-208ENST00000608287 RPL22P35268 128 aaKnown RBP18.79■□□□□ 0.6
SGMS1-208ENST00000608287 KCNJ1P48048 391 aa18.79■□□□□ 0.6
SGMS1-208ENST00000608287 CTSCP53634 463 aa18.79■□□□□ 0.6
SGMS1-208ENST00000608287 CDH17Q12864 832 aa18.79■□□□□ 0.6
SGMS1-208ENST00000608287 KIR2DS5Q14953 304 aa18.79■□□□□ 0.6
SGMS1-208ENST00000608287 SEPT7Q16181 437 aaKnown RBP18.79■□□□□ 0.6
SGMS1-208ENST00000608287 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.79■□□□□ 0.6
SGMS1-208ENST00000608287 TMEM220Q6QAJ8 160 aa18.79■□□□□ 0.6
SGMS1-208ENST00000608287 DET1Q7L5Y6 550 aa18.79■□□□□ 0.6
SGMS1-208ENST00000608287 C11orf96Q7Z7L8 435 aa18.79■□□□□ 0.6
SGMS1-208ENST00000608287 PLXDC1Q8IUK5 500 aa18.79■□□□□ 0.6
SGMS1-208ENST00000608287 SLC35F6Q8N357 371 aa18.79■□□□□ 0.6
SGMS1-208ENST00000608287 PRR7Q8TB68 274 aa18.79■□□□□ 0.6
SGMS1-208ENST00000608287 STYXQ8WUJ0 223 aa18.79■□□□□ 0.6
SGMS1-208ENST00000608287 NCSTNQ92542 709 aa18.79■□□□□ 0.6
SGMS1-208ENST00000608287 PBKQ96KB5 322 aa18.79■□□□□ 0.6
SGMS1-208ENST00000608287 C5orf34Q96MH7 638 aa18.79■□□□□ 0.6
SGMS1-208ENST00000608287 C19orf43Q9BQ61 176 aa18.79■□□□□ 0.6
SGMS1-208ENST00000608287 SLC25A23Q9BV35 468 aa18.79■□□□□ 0.6
SGMS1-208ENST00000608287 FAM96AQ9H5X1 160 aa18.79■□□□□ 0.6
SGMS1-208ENST00000608287 APMAPQ9HDC9 416 aa18.79■□□□□ 0.6
SGMS1-208ENST00000608287 SARS2Q9NP81 518 aaKnown RBP18.79■□□□□ 0.6
SGMS1-208ENST00000608287 HOMER3Q9NSC5 361 aa18.79■□□□□ 0.6
SGMS1-208ENST00000608287 NLE1Q9NVX2 485 aaPredicted RBP18.79■□□□□ 0.6
SGMS1-208ENST00000608287 PIPSLA2A3N6 862 aa18.78■□□□□ 0.6
SGMS1-208ENST00000608287 CCDC78A2IDD5 438 aa18.78■□□□□ 0.6
SGMS1-208ENST00000608287 WIPF3A6NGB9 483 aa18.78■□□□□ 0.6
SGMS1-208ENST00000608287 C21orf140B9A014 251 aa18.78■□□□□ 0.6
SGMS1-208ENST00000608287 SUN1O94901 812 aa18.78■□□□□ 0.6
SGMS1-208ENST00000608287 APRTP07741 180 aa18.78■□□□□ 0.6
SGMS1-208ENST00000608287 RNF224P0DH78 156 aa18.78■□□□□ 0.6
SGMS1-208ENST00000608287 IDSP22304 550 aa18.78■□□□□ 0.6
SGMS1-208ENST00000608287 MSNP26038 577 aaKnown RBP18.78■□□□□ 0.6
SGMS1-208ENST00000608287 RPL10P27635 214 aaKnown RBP18.78■□□□□ 0.6
SGMS1-208ENST00000608287 PBLDP30039 288 aaPredicted RBP18.78■□□□□ 0.6
SGMS1-208ENST00000608287 LEPRP48357 1165 aaKnown RBP18.78■□□□□ 0.6
SGMS1-208ENST00000608287 FOXM1Q08050 763 aa18.78■□□□□ 0.6
SGMS1-208ENST00000608287 IL11RAQ14626 422 aa18.78■□□□□ 0.6
SGMS1-208ENST00000608287 SNX20Q7Z614 316 aa18.78■□□□□ 0.6
SGMS1-208ENST00000608287 AMZ2Q86W34 360 aa18.78■□□□□ 0.6
SGMS1-208ENST00000608287 PRELID2Q8N945 189 aa18.78■□□□□ 0.6
SGMS1-208ENST00000608287 ULK4Q96C45 1275 aa18.78■□□□□ 0.6
SGMS1-208ENST00000608287 DCUN1D1Q96GG9 259 aa18.78■□□□□ 0.6
SGMS1-208ENST00000608287 MS4A14Q96JA4 679 aa18.78■□□□□ 0.6
SGMS1-208ENST00000608287 PDLIM2Q96JY6 352 aa18.78■□□□□ 0.6
SGMS1-208ENST00000608287 SLAMF7Q9NQ25 335 aa18.78■□□□□ 0.6
SGMS1-208ENST00000608287 SCHIP1Q9P0W5 487 aaPredicted RBP18.78■□□□□ 0.6
SGMS1-208ENST00000608287 CPNE7Q9UBL6 633 aa18.78■□□□□ 0.6
SGMS1-208ENST00000608287 LRBAP50851 2863 aa18.78■□□□□ 0.6
SGMS1-208ENST00000608287 KIF5CO60282 957 aa18.77■□□□□ 0.6
SGMS1-208ENST00000608287 DPM1O60762 260 aa18.77■□□□□ 0.6
SGMS1-208ENST00000608287 POP7O75817 140 aaKnown RBP18.77■□□□□ 0.6
SGMS1-208ENST00000608287 CLDN1O95832 211 aa18.77■□□□□ 0.6
SGMS1-208ENST00000608287 RALBP11234 206 aa18.77■□□□□ 0.6
SGMS1-208ENST00000608287 F8A1P23610 371 aa18.77■□□□□ 0.6
SGMS1-208ENST00000608287 COL8A1P27658 744 aa18.77■□□□□ 0.6
SGMS1-208ENST00000608287 GRIA1P42261 906 aa18.77■□□□□ 0.6
SGMS1-208ENST00000608287 DRG2P55039 364 aaKnown RBP18.77■□□□□ 0.6
SGMS1-208ENST00000608287 INPP5JQ15735 1006 aaPredicted RBP18.77■□□□□ 0.6
SGMS1-208ENST00000608287 EIF2S3LQ2VIR3 472 aaKnown RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms