RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 ANKRD20A4Q4UJ75 823 aa27.51■■□□□ 1.99
SSBP4-206ENST00000599699 PTRHD1Q6GMV3 140 aaKnown RBP27.51■■□□□ 1.99
SSBP4-206ENST00000599699 IRGCQ6NXR0 463 aa27.51■■□□□ 1.99
SSBP4-206ENST00000599699 NAPRTQ6XQN6 538 aa27.51■■□□□ 1.99
SSBP4-206ENST00000599699 CLEC14AQ86T13 490 aa27.51■■□□□ 1.99
SSBP4-206ENST00000599699 HNRNPLLQ8WVV9 542 aaKnown RBP27.51■■□□□ 1.99
SSBP4-206ENST00000599699 ZFPM2Q8WW38 1151 aa27.51■■□□□ 1.99
SSBP4-206ENST00000599699 RPS6KL1Q9Y6S9 549 aa27.51■■□□□ 1.99
SSBP4-206ENST00000599699 KMT2BQ9UMN6 2715 aaPredicted RBP27.51■■□□□ 1.99
SSBP4-206ENST00000599699 MN1Q10571 1320 aaPredicted RBP27.5■■□□□ 1.99
SSBP4-206ENST00000599699 UBA6A0AVT1 1052 aaPredicted RBP27.5■■□□□ 1.99
SSBP4-206ENST00000599699 PFDN6O15212 129 aa27.5■■□□□ 1.99
SSBP4-206ENST00000599699 CD151P48509 253 aa27.5■■□□□ 1.99
SSBP4-206ENST00000599699 CSE1LP55060 971 aaKnown RBP27.5■■□□□ 1.99
SSBP4-206ENST00000599699 USP7Q93009 1102 aa27.5■■□□□ 1.99
SSBP4-206ENST00000599699 ZDHHC12Q96GR4 267 aa27.5■■□□□ 1.99
SSBP4-206ENST00000599699 KRT12Q99456 494 aa27.5■■□□□ 1.99
SSBP4-206ENST00000599699 KIR3DX1Q9H7L2 352 aa27.5■■□□□ 1.99
SSBP4-206ENST00000599699 SLC24A2Q9UI40 661 aa27.5■■□□□ 1.99
SSBP4-206ENST00000599699 PCDHGA7Q9Y5G6 932 aa27.5■■□□□ 1.99
SSBP4-206ENST00000599699 A0A087WV48 116 aa27.49■■□□□ 1.99
SSBP4-206ENST00000599699 EFCAB7A8K855 629 aa27.49■■□□□ 1.99
SSBP4-206ENST00000599699 TTI1O43156 1089 aa27.49■■□□□ 1.99
SSBP4-206ENST00000599699 RASSF9O75901 435 aa27.49■■□□□ 1.99
SSBP4-206ENST00000599699 FGF3P11487 239 aaPredicted RBP27.49■■□□□ 1.99
SSBP4-206ENST00000599699 MAGEA3P43357 314 aa27.49■■□□□ 1.99
SSBP4-206ENST00000599699 LEPRP48357 1165 aaKnown RBP27.49■■□□□ 1.99
SSBP4-206ENST00000599699 PLOD1Q02809 727 aaPredicted RBP27.49■■□□□ 1.99
SSBP4-206ENST00000599699 TMEM164Q5U3C3 297 aa27.49■■□□□ 1.99
SSBP4-206ENST00000599699 C19orf48Q6RUI8 117 aa27.49■■□□□ 1.99
SSBP4-206ENST00000599699 ARHGAP22Q7Z5H3 698 aa27.49■■□□□ 1.99
SSBP4-206ENST00000599699 PDZD3Q86UT5 571 aa27.49■■□□□ 1.99
SSBP4-206ENST00000599699 HOOK3Q86VS8 718 aa27.49■■□□□ 1.99
SSBP4-206ENST00000599699 PHC3Q8NDX5 983 aa27.49■■□□□ 1.99
SSBP4-206ENST00000599699 TFGQ92734 400 aaPredicted RBP27.49■■□□□ 1.99
SSBP4-206ENST00000599699 C9orf72Q96LT7 481 aa27.49■■□□□ 1.99
SSBP4-206ENST00000599699 TRIM51Q9BSJ1 452 aa27.49■■□□□ 1.99
SSBP4-206ENST00000599699 GNPTGQ9UJJ9 305 aa27.49■■□□□ 1.99
SSBP4-206ENST00000599699 IQCF5A8MTL0 148 aa27.48■■□□□ 1.99
SSBP4-206ENST00000599699 PRAMEF10O60809 474 aa27.48■■□□□ 1.99
SSBP4-206ENST00000599699 C9P02748 559 aa27.48■■□□□ 1.99
SSBP4-206ENST00000599699 ARCN1P48444 511 aaKnown RBP27.48■■□□□ 1.99
SSBP4-206ENST00000599699 EIF3BP55884 814 aaKnown RBP27.48■■□□□ 1.99
SSBP4-206ENST00000599699 THOC5Q13769 683 aaKnown RBP27.48■■□□□ 1.99
SSBP4-206ENST00000599699 NEPROQ6NW34 567 aa27.48■■□□□ 1.99
SSBP4-206ENST00000599699 FAM92BQ6ZTR7 304 aa27.48■■□□□ 1.99
SSBP4-206ENST00000599699 KCNE4Q8WWG9 221 aa27.48■■□□□ 1.99
SSBP4-206ENST00000599699 STAMBPL1Q96FJ0 436 aa27.48■■□□□ 1.99
SSBP4-206ENST00000599699 SIGLEC10Q96LC7 697 aa27.48■■□□□ 1.99
SSBP4-206ENST00000599699 FCRL3Q96P31 734 aaPredicted RBP27.48■■□□□ 1.99
SSBP4-206ENST00000599699 CARD6Q9BX69 1037 aa27.48■■□□□ 1.99
SSBP4-206ENST00000599699 WDR70Q9NW82 654 aa27.48■■□□□ 1.99
SSBP4-206ENST00000599699 OCIAD1Q9NX40 245 aa27.48■■□□□ 1.99
SSBP4-206ENST00000599699 SLC39A1Q9NY26 324 aa27.48■■□□□ 1.99
SSBP4-206ENST00000599699 IL1RAPL1Q9NZN1 696 aa27.48■■□□□ 1.99
SSBP4-206ENST00000599699 PKD1L2Q7Z442 2459 aa27.48■■□□□ 1.99
SSBP4-206ENST00000599699 NVLO15381 856 aaKnown RBP27.47■■□□□ 1.99
SSBP4-206ENST00000599699 KRT37O76014 449 aa27.47■■□□□ 1.99
SSBP4-206ENST00000599699 DNAJC21Q5F1R6 531 aaKnown RBP27.47■■□□□ 1.99
SSBP4-206ENST00000599699 RNF187Q5TA31 235 aaPredicted RBP27.47■■□□□ 1.99
SSBP4-206ENST00000599699 ARMC6Q6NXE6 501 aa27.47■■□□□ 1.99
SSBP4-206ENST00000599699 TMEM135Q86UB9 458 aa27.47■■□□□ 1.99
SSBP4-206ENST00000599699 LRRC6Q86X45 466 aa27.47■■□□□ 1.99
SSBP4-206ENST00000599699 KRT222Q8N1A0 295 aa27.47■■□□□ 1.99
SSBP4-206ENST00000599699 ACVR1CQ8NER5 493 aa27.47■■□□□ 1.99
SSBP4-206ENST00000599699 ART4Q93070 314 aa27.47■■□□□ 1.99
SSBP4-206ENST00000599699 TAAR9Q96RI9 348 aa27.47■■□□□ 1.99
SSBP4-206ENST00000599699 TCF12Q99081 682 aa27.47■■□□□ 1.99
SSBP4-206ENST00000599699 TRIM31Q9BZY9 425 aa27.47■■□□□ 1.99
SSBP4-206ENST00000599699 MVB12BQ9H7P6 319 aa27.47■■□□□ 1.99
SSBP4-206ENST00000599699 HRASLS2Q9NWW9 162 aa27.47■■□□□ 1.99
SSBP4-206ENST00000599699 PIKFYVEQ9Y2I7 2098 aa27.46■■□□□ 1.99
SSBP4-206ENST00000599699 SLC5A10A0PJK1 596 aa27.46■■□□□ 1.99
SSBP4-206ENST00000599699 OR6C74A6NCV1 312 aa27.46■■□□□ 1.99
SSBP4-206ENST00000599699 IVDP26440 423 aa27.46■■□□□ 1.99
SSBP4-206ENST00000599699 ITPKBP27987 946 aa27.46■■□□□ 1.99
SSBP4-206ENST00000599699 CCR7P32248 378 aa27.46■■□□□ 1.99
SSBP4-206ENST00000599699 ABCG1P45844 678 aa27.46■■□□□ 1.99
SSBP4-206ENST00000599699 SEPHS1P49903 392 aa27.46■■□□□ 1.99
SSBP4-206ENST00000599699 HSPA14Q0VDF9 509 aa27.46■■□□□ 1.99
SSBP4-206ENST00000599699 TMED2Q15363 201 aa27.46■■□□□ 1.99
SSBP4-206ENST00000599699 CACHD1Q5VU97 1274 aa27.46■■□□□ 1.99
SSBP4-206ENST00000599699 OOSP2Q86WS3 158 aa27.46■■□□□ 1.99
SSBP4-206ENST00000599699 AGGF1Q8N302 714 aaeCLIP27.46■■□□□ 1.99
SSBP4-206ENST00000599699 OR4E2Q8NGC2 313 aa27.46■■□□□ 1.99
SSBP4-206ENST00000599699 LKAAEAR1Q8TD35 194 aa27.46■■□□□ 1.99
SSBP4-206ENST00000599699 LCN9Q8WX39 176 aa27.46■■□□□ 1.99
SSBP4-206ENST00000599699 PANX3Q96QZ0 392 aa27.46■■□□□ 1.99
SSBP4-206ENST00000599699 HGH1Q9BTY7 390 aa27.46■■□□□ 1.99
SSBP4-206ENST00000599699 P2RY12Q9H244 342 aa27.46■■□□□ 1.99
SSBP4-206ENST00000599699 EIF2AK3Q9NZJ5 1116 aaKnown RBP27.46■■□□□ 1.99
SSBP4-206ENST00000599699 EPHA6Q9UF33 1036 aa27.46■■□□□ 1.99
SSBP4-206ENST00000599699 ASF1AQ9Y294 204 aa27.46■■□□□ 1.99
SSBP4-206ENST00000599699 DSPP15924 2871 aaKnown RBP27.46■■□□□ 1.99
SSBP4-206ENST00000599699 CELSR3Q9NYQ7 3312 aa27.45■■□□□ 1.99
SSBP4-206ENST00000599699 KIF1CO43896 1103 aaKnown RBP27.45■■□□□ 1.98
SSBP4-206ENST00000599699 USP1O94782 785 aa27.45■■□□□ 1.98
SSBP4-206ENST00000599699 APOA4P06727 396 aa27.45■■□□□ 1.98
SSBP4-206ENST00000599699 OGNP20774 298 aaKnown RBP27.45■■□□□ 1.98
SSBP4-206ENST00000599699 FMO4P31512 558 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms